Os06g0700500

From RiceWiki
Revision as of 20:28, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0700500

Description

Protein of unknown function DUF266, plant family protein

Version

NM_001065014.1 GI:115469759 GeneID:4341964

Length

4705 bp

Definition

Oryza sativa Japonica Group Os06g0700500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30339564..30344268

Sequence Coding Region

30339745..30339873,30340137..30340175,30340302..30340424,30340508..30340567,30341038..30341118
,30341312..30341402,30341560..30341631,30341706..30341806,30342186..30342284
,30342534..30342857

Expression

GEO Profiles:Os06g0700500

Genome Context

<gbrowseImage1> name=NC_008399:30339564..30344268 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30339564..30344268 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaccgcgcaacaggtcttcagctagaaggcctctctggattgtcatcttgattgcttttgtctgtgcagtaggcattggagcctatctttatacaccccagcattacacaccttgttacttggtgtcatcaaattcctgtagttctcggcctcctccagaacctgctagggtttacactgatgatgagattgctgctcgtattgtcataagagatatcattttggcacagccagttcagtcaaagaatccaaaaattgctttcatgttcttgacacccagttcattgccattcgagaagctttgggaaaagttcttcatggggcatgaagacagatataccatatatgtacatgcatcaagagaaaggcctgttcacgctagtccgatatttaatggcagagatattcgaagtgaaaaggtagtctggggcacaatttcaatgattgatgcagagaggaggcttttggctaatgcactgcaagatcctgataaccagcattttgtcttgctctctgagagctgtgtaccacttcataactttgattatgtatatagctatcttatggaaacaaatatcagctttgttgactgttttgacgatcctggtccacatggagcaggcagatattctgatcatatgctacctgaaattgttaagagagattggagaaaaggtgcacagtggttcacagtgaaacgtcagcatgcagttcttattctttccgatttcctttactatgcaaagttcaagcggtactgtaagccgggaaacgaatggcataactgctattctgatgaacactatttgccaaccctctttaatatggttgatccaactggaattgcaaattggtcagtgacacatgttgattggtctgaaggaaaatggcatcctaaagcttacagggctgttgacacaagctttgaactgcttaagaatatttcgtccattgatgagagtattcatgttacaagcaatgcaaagcaccaagtgatgagaagaccgtgcctatggaatggcatgaagaggccttgctacctatttgcacggaaattctatcccgaggcactcgacaatctgatgaacattttctcaaacttcactatcatctaa</cdnaseq>

Protein Sequence

<aaseq>MAPRNRSSARRPLWIVILIAFVCAVGIGAYLYTPQHYTPCYLVS SNSCSSRPPPEPARVYTDDEIAARIVIRDIILAQPVQSKNPKIAFMFLTPSSLPFEKL WEKFFMGHEDRYTIYVHASRERPVHASPIFNGRDIRSEKVVWGTISMIDAERRLLANA LQDPDNQHFVLLSESCVPLHNFDYVYSYLMETNISFVDCFDDPGPHGAGRYSDHMLPE IVKRDWRKGAQWFTVKRQHAVLILSDFLYYAKFKRYCKPGNEWHNCYSDEHYLPTLFN MVDPTGIANWSVTHVDWSEGKWHPKAYRAVDTSFELLKNISSIDESIHVTSNAKHQVM RRPCLWNGMKRPCYLFARKFYPEALDNLMNIFSNFTII</aaseq>

Gene Sequence

<dnaseqindica>4396..4524#4094..4132#3845..3967#3702..3761#3151..3231#2867..2957#2638..2709#2463..2563#1985..2083#1412..1735#actcctctcccaccatcattcacagccgtgcttcgctcctccaaacccaaaaaatttctcctgcttttgtttcctgcacaccggctagatctcgccaagaactcggtaatcccaagccctgggtgagtgagatccagcttcgcaagaaggtgataagagtgattctgctcttgctacgcttgtcagttaaaggccccttttttttgggtttttgggtggtttctgcttgatgcggagatgggaaaggagggatttttagggcctctctcctgtgattcttgcctgcgttggtgtgattatgggtgttgtgtgtttgtgttcttgcgaggatttgtgatttgggagtgttgctaatattgtggagttgggggttttttggtgaggcaagaagggggaaggaacagttttttgttctgttcttgaaattattttctatctttttcttcggttagtgtttctttcaagtagttttagccctttgcttgcgcggaagcacgggaatttactgatttttcagtgaatgcttggaatctttaagtggttttgagaggtttcttgctataaaatacatgtgaacaggaaaaatgtgagatgttaggtttgctttttgttcagattggatagctcgaactagttcggttggtggtaattggtgaggttttaggggtttaagggggttgctttctcatgtgcaaaggggaatgtgggataatcatctgaaacacgcaggcagcgtgcataccttaaaatgcaagttacacatgttttataaaccagcaagaaacaaaagcaaagttgtttgttatatgtgctacatagtgtaagctataggctcaagatttcgtcttactgtggcttaatctgtgggctgaagatctgcaactcttcttgcagagttttctgtgcaatgatcaaaccctagattaatcctttgctttgtctgctagaacattagtcaatggtcaatgacagttttaggcatacattttcttccttttcacctaaggaataaggtctgctctcgaaaacaaaggagttgcatcttattcatctgagtcaccacaacttctgtaaaagaaccttgttccattatcgagcatatgcccataactttcatagaaagaaacacgagaattatagacaaatgctgagttgacatcatttttaggattaaagctgtttcataatctatacatttcccttatcattcggtccatattgttaaccagaatatgaaaaatgctgattgaaatcattaagctgcaattctcattccccatgtttttcaggttttgggggttcttgggcagttctgccaggagagtgacactggatgattgcataaatgaagcttgctgaatgtagattgtgaagttctcctttcctgcgtacggccatatacacttttatcatggcaccgcgcaacaggtcttcagctagaaggcctctctggattgtcatcttgattgcttttgtctgtgcagtaggcattggagcctatctttatacaccccagcattacacaccttgttacttggtgtcatcaaattcctgtagttctcggcctcctccagaacctgctagggtttacactgatgatgagattgctgctcgtattgtcataagagatatcattttggcacagccagttcagtcaaagaatccaaaaattgctttcatgttcttgacacccagttcattgccattcgagaagctttgggaaaagttcttcatggtatgatatttacgctattgtaataaagatcttaattgcactttttactcattgatgattaatcttgcattatgtaataattataagtagcactaatttcttcttatcaggaatgcatgttattgatttttgttcacgttttattttctggaagagcttcatgccaatctcatgaaagttataagatatgctcacttgctgaggtgcacgtggatggtactgaatccagatacttgggtgtactttcaggggcatgaagacagatataccatatatgtacatgcatcaagagaaaggcctgttcacgctagtccgatatttaatggcagagatattcgaagtgaaaaggtaatttgctagatttgatttagaggtgacctcatttttgcaacaatacgttttctcactttctctagtacattttgccccccaaaatagttggtgtcttgcctaatcgctgataggtacagaatcatagtcagatccttggttaaacattccttttgaatatttttcctagacaacggcagtgatttctgttctagtttgaaaccaaatttaattgtaacttccatttagattctacaaaaatcttcataaaacaacatataatagcaagtaggttttaaacagtaccaaaagagcgtatgccctaaggagcactaagctcccgttatccactggaaaaactggttcccaacaataacaacagaaacttttcttgtaggtagtctggggcacaatttcaatgattgatgcagagaggaggcttttggctaatgcactgcaagatcctgataaccagcattttgtcttgctctctgagaggttaatcattttcttttgttcttatccttaatcatatcttagatccataccctaatactttgttctcattacagctgtgtaccacttcataactttgattatgtatatagctatcttatggaaacaaatatcagctttgttgactggtaagtggacgcctttaaaccctgaatgttattacatgtgtagacacacttaaagttgaacagatgtttgattcaggatctccagtgcccctttcattcatgattgctaacagacattatagtttctccactgacacgccaactgctttttcttcagttttgacgatcctggtccacatggagcaggcagatattctgatcatatgctacctgaaattgttaagagagattggagaaaaggtgcacaggtatactttaatatgcataatttttctagaaagtattgcaaactgttgctttgccttttcattttcttcccttttacaaatgtttagagcgggtgctgtggaacttcaataatcctgggtattatactctaaagaattgctatattgtcatacagtctaacctcacacattctgatatgttttcctcttgcagtggttcacagtgaaacgtcagcatgcagttcttattctttccgatttcctttactatgcaaagttcaagcggtactgtaaggtaaaattgcattcaaatgggtaaagtgaatttaaaaggtgtattggtagaagtgtaagccattagataatattattacagacagcatcgtattggtttagtactagcacagtgaatgcattatggaaatctccatgctatttcattgcagttgtaacttgtactaggctacttgctctgtccttgtgatttttcctcagtgaatgcacatagaaagccccactttgtattttctgcacaccatgcagcattatatggtctagcactggtaaaccataacgagtgcaaatccccttactgcatttgttacacagtagttttgagttttgacttgtactactattgtttttaatcaattccgatgaccaatgaaatgctttggttcatttctctacatctttatgaccactgaattgctgttgtttcctgaattttagctctttactgatcttgtgattgcacttttgcagccgggaaacgaatggcataactgctattctgatgaacactatttgccaaccctctttaatgtaagaactctcaaaaactcttaaatgatgtttttcagttgtgtttacttcccagtgatttcaggccgttattgtacctgcagatggttgatccaactggaattgcaaattggtcagtgacacatgttgattggtctgaaggaaaatggcatcctaaagcttacagggctgttgacacaagctttgaactgcttaagaatatttcggtgagctctggtatacttgtacatgcaaaagaaggggaaacatacatgttttatttccttaatggccaattttcgcaaaaatctgcattcttgggatttgtctaattaataatgaaatttttgcagtccattgatgagagtattcatgttacaagcaatgcaaaggtagagttatttgatcttttcctcttcttgctttctagtactagaatcttcaagttagttctgtgagactgaacaagttctccccttctttactgcatgcatatttgacatgttcctacctagatttaacttgaaattctaatgtgactgactggctgaacaaatttcttgaatcaacactgtttctacaaatcgatttaattttttttcacattttcacaattcttttgaggaggattttgataaattgtttggtcttgcagcaccaagtgatgagaagaccgtgcctatggaatggcatgaagaggccttgctacctatttgcacggaaattctatcccgaggcactcgacaatctgatgaacattttctcaaacttcactatcatctaagggaaggatgaatcaaaaacctagtttgcatgtaacactacagtataggccttggaaaatcagaaacccagagagactcgctgaattgttttttgtgatctctcttggaacatcaaatgattttcctttttcgcgaagatgttgcatggtttgcagttgaaagagcagtcaaatttgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0700500, RefSeq:Os06g0700500