Os05g0372000

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Revision as of 10:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0372000| Description = Ribosomal protein L22/L17 family protein| Version = NM_001061893.1 GI:115463516 GeneID:4338591| Length = 3598 bp| D...")
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Gene Name

Os05g0372000

Description

Ribosomal protein L22/L17 family protein

Version

NM_001061893.1 GI:115463516 GeneID:4338591

Length

3598 bp

Definition

Oryza sativa Japonica Group Os05g0372000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17921026..17924623

Sequence Coding Region

17922847..17923242,17923338..17923439,17924474..17924578

Expression

GEO Profiles:Os05g0372000

Genome Context

<gbrowseImage1> name=NC_008398:17921026..17924623 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17921026..17924623 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgcgactcgtggcccggtcgaggagaggcctagcgctcgccctctcccgcgccggcgccggcgccccgtcgcggccctcccctcctggcctcggcaagactctggggtatgagccaacatcacatctccatggtgctcagtttttaccttgttggttttcaactattgcatctaatggatctcacatgcaaaaggcacaggagacatgtaagccagttgctggaatggaacactctgatgcactgaaagtaatggaaggaacctctcctaaagttgtggcattcagcccactagaagcagctatcactaaacctagaagcagtcccttgacaattgaaagttctaaagtaaagcgatcagagattgcaacgctagtcacattttacatgatcccttctctgcttgtttcctcaaaaaatgggcttgctacctctattttggttggcgcagtattccatcaaatatacatgtttcacaaggagatatttctggactatgtgcaccatgatatcaccaggaagtgggctttgatatacttcaagctgcttttgttgatcatggcgaaggaaaccattgtgtatttcaactttatctga</cdnaseq>

Protein Sequence

<aaseq>MASRLVARSRRGLALALSRAGAGAPSRPSPPGLGKTLGYEPTSH LHGAQFLPCWFSTIASNGSHMQKAQETCKPVAGMEHSDALKVMEGTSPKVVAFSPLEA AITKPRSSPLTIESSKVKRSEIATLVTFYMIPSLLVSSKNGLATSILVGAVFHQIYMF HKEIFLDYVHHDITRKWALIYFKLLLLIMAKETIVYFNFI</aaseq>

Gene Sequence

<dnaseqindica>1382..1777#1185..1286#46..150#ggcggcggagagagagagagagagagagagagagagagaatcgccatggcgtcgcgactcgtggcccggtcgaggagaggcctagcgctcgccctctcccgcgccggcgccggcgccccgtcgcggccctcccctcctggcctcggcaaggtgcgccgccgcccctccctagtcccccactgagactctcgcttttgttgcgtagattttaggtgtttacgagatcgaagtggctgggtgcgagcgctgttgatccgattgcctctgggatgatttggttggttcggttacctgtggtgatagtattgtgtaattggtgtgtgatctgatgcagcctctatgtagatttcgatattgccctgtttcgttgtgaaagatgtgtgtgccctctattggtgataggtctgagatggaatggatataccagtagaggctgggagccttaagttgtccaattgattagctgaactctacttatatgttcccatgttttgtgagtactggacatgttcttccttgagcagaagattagctactgtagtagactattactccattcgtcctaaaatataagggcttttggttggatatgacacatcctagtactacaaatctggacagaagcttgtctagaatcatagtattaagatgtgtcacatctacccaaaaacccttaaattttgggacagagggagtagtaagtttccgttttgaaaaaaaaaaaacctatagtcgaaaactcttagttaagatctgcacgctaactttatatggcattcacctctccataccatcggagagtattaactgacttttgatccattcatgttttgcttaaattcctgagctctcatgctagttaggaatgaaactatatccttgtatggcacacaccttctatctgatgactaatttgtcttctcaaaattgaaacttctgaaatttcattcaactactattggccaaattgaagcttgacatcttgcttttggcatgatttacctgatattatgcatacatttaggcttgaaaaactcatctacaatttaccaaaatgataaatgcccaataaactaattttgtttgctttgttgattatgacaactgatatttttttgaaagacaattgcctctgactttctgtgctctaatttgcatttctgacatgatatttatgcgtgcagactctggggtatgagccaacatcacatctccatggtgctcagtttttaccttgttggttttcaactattgcatctaatggatctcacatgcaaaaggcacaggtttgtctccagctagattagtgcttgatttgtcaggtgccctgctacatgttgaatgttcatcgggttgatgttttctaatctaactgatacaggagacatgtaagccagttgctggaatggaacactctgatgcactgaaagtaatggaaggaacctctcctaaagttgtggcattcagcccactagaagcagctatcactaaacctagaagcagtcccttgacaattgaaagttctaaagtaaagcgatcagagattgcaacgctagtcacattttacatgatcccttctctgcttgtttcctcaaaaaatgggcttgctacctctattttggttggcgcagtattccatcaaatatacatgtttcacaaggagatatttctggactatgtgcaccatgatatcaccaggaagtgggctttgatatacttcaagctgcttttgttgatcatggcgaaggaaaccattgtgtatttcaactttatctgagttttatctcttgcagagggacaatctatgtactcatccatacaccagaaaaaatgacggtggtggataaaattctggcgccttgttctcttcatggacattttcaacatttttccttctcaacttcatttgtatatgcacttgaaagaggatgattagtgatcaatgaagcaattagttcgacttcattcttgtttataataatagcaactgatatgaactgtttggtatttgctagcacgatgcagccatatggattttgttttccatgtatgaattatcatcttatgtgcatatatttctccttttggaggcttgagctgccattatttttttgcgaatccttcagactccagtcctacatgaatccagcgctatgctcctttttggaggttttgttactgcagagatgattgtgtgtttaactttattgattggtttgattgtttctgcagatgttacaaagattggccggttgcagtttgtttgaaatgctaggattcagaagtccctccagatgcttgcttcaaatatacttactactcagtaaatgataggagtactgctctgtaaatgcatgaaaaaacagtgatggagaaatctgatgcttgtgtacccaatgatgcaggatcagtcctccttggtgaacacgctggaatttcccaataatttgcagtatcccacaacattcagaaaaccaaattccttggaaattcacgacacaaggtaaagaacaaaaacccatgacgttttgctttgcaatttgcaggtagggctctgctgtccttgctgctgctgctggatttgaaagaaaaaaacctgtgtacgatgtacgtacgccggctgcatccttgtacagccatgttcatgtgagagcggaaaaaactgccttccagctcagctctgcagggctgaattgccgcctggatcctgcggccgccatgtttacccgggacggccggccggacggcggcgaccccatcggctgccacgcgcacatgcccggcgaccgacggccgccggtgctgactgtgaattgacatgaatgctgccactgcctgtgcctgcaatgtcccagcttgctttgcaggaggcagcagcagcagcagctagctgtggtagaatggctgcttctgtgaccgtctctgcattgcagagagatgcagtgagtgtgtgttgagtgactcctccagctgggagctccaggaattcacctccccacacacagtcacagtcacaaacacactcccagtgcattacctgtctgtctgcactgtgcatgcagtgaaacctctgaacattttcaccgtggcattctgaattctgatccggcaatcaatcaaccagcccttgcagttattagtgaagtgcagatgtatcatgtatctgtccagccatcaaatgctgcagtggagaacagggaactgaagggggttcttggatttggcttctttactttttcgctgattttatttttttttctctggcacctgcttttatttcttcagatctcatattatcatcaccatatgggtggttttgcaagagtggacctgaggttcttgcagcaatgcagccgcaggacccatagaaaggaccattgaaaactgtggcacaaaacatgcatagtgaaaatggcgcaggcattacagagaaaagtagtagatatgctagctataatttcaggattgtgcaattttgttgtcttccctggctatggagtacggagtatcatgttacaactcaccatgtctttacatatggttaacttcacttgtgactctctcttttaaataaaaatagaatgaccctttttctctt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0372000, RefSeq:Os05g0372000