Os06g0704700

From RiceWiki
Revision as of 20:28, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0704700

Description

NmrA-like family protein

Version

NM_001065046.1 GI:115469823 GeneID:4341998

Length

4216 bp

Definition

Oryza sativa Japonica Group Os06g0704700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30639532..30643747

Sequence Coding Region

30639731..30639802,30639914..30639961,30640041..30640118,30640207..30640263,30640500..30640565
,30640653..30640742,30641039..30641116,30641221..30641325,30641437..30641572
,30641681..30641756,30641876..30642080,30642192..30642404,30642976..30643698

Expression

GEO Profiles:Os06g0704700

Genome Context

<gbrowseImage1> name=NC_008399:30639532..30643747 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30639532..30643747 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccatcgtggccgcgcgggcgcctccgggcggcggcggcgccgcagccgtcatcgcgtaccaccactgcgcgtccccctcgcgggcgctcccgctggcggccggcccgtccgcgggaggaggggtggtggtggggaggagataccaccaccacggcggcgcgtgctgcttcgccgcaaagcccacgcaggtggccgccgaggtggatcagggaggggcggccgagccgggtgtcgcttccgccaatgctgcggtggaggcgaagccgcgtaagaaggcgcgatcccggcgaggaaggaaggggaaaaggtcgtcgtcgtcggagaccaggacgacggcggtgctcgaggaggaggaggaggtggaggtgaaggagaagaagacggaggaggatggagaggaggggaagaggaaggagaaggcggcggggcttgacctggacgaggtgatggcggtgagccccgtggggctagggcggcggtcgcggcagatattcgacgaggtgtggcgcaagttctcgcggctggggcagatgtcgagcgcgtcgtcgacggcgctggcggaggaggagcaggccgtgctcatccgcggcggacccatgtgcgagttcaccgtccccggcgcgcaggacaccaccgtcctcgtcgtcggcgccaccagccgcatcggccgcatcgtcgtccgcaagctcatgctccgcgggtacaatgtcaaggctttagttagaaggaatgatgctgaagtgatagatatgctcccaaggtcggtggatattgttgtcggtgatgttggtgatccttcaactgtcaaatcggctgtatcaggttgcagcaagataatctattgcgcaactgcacgctcaactattactggagacctaaatagggttgataatcaaggagtaaggaatgttagtaaggctttccaggattactacaatgaattggctcagcttagggctggtaaaagcagcaagagcaaactcctgatagcaaaatttaaatctcccaagtctctgaatggttgggaggtggaccagggatcttattttccaaacacatttgcttctaggtttgatgaaggtatcgatgcatcatttgacttttcagaggctggtcaagctgttttctcaggatttgttttcacaagaggtggatatgttgagatatcaaaaaggctatctcttcctttgggatctactctagacaggtatgatggcttacttttttcggtgggaggaaatggaagatcatatgttgttattcttgagactggtccgctggctgacacctcccagagcaagaagtactttgctcggatgactacaaaagtaggattttgtagggtgagggtaccattttcagcttttcggccagtaaaccctcaagatcctcccctagacccttttcttgtgcatacactaacaattaggtttgaacccaaaagacagagacctggtgatggatctcaaagtgctactgaccccagaaattttgagcttatattggaatacatcaaagctttgcctactggtcaagaaacagacttcattctggtctcatgctcaggttctgggattgaacctaacagaagagaacaagtcctcaaagcaaaaaaggctggagaggatgcattgagaaggtcaggccttggatacacaatagtacgccctggtccactgcaggaagaacctggtggtcagcgtgcattgatctttgatcaagggaacagaatctcgcagggtatcagttgcgccgatgtagcagatatttgtgtcaaagcattgcatgattccactgctaggaacaaaagttttgatgtatgctacgagtatgtagctaagcaagggaatgagctatatgaacttgtggcccatttaccagataaagctaacaactatcttacaccggcattatctgttctagagaagaacacctga</cdnaseq>

Protein Sequence

<aaseq>MAAAIVAARAPPGGGGAAAVIAYHHCASPSRALPLAAGPSAGGG VVVGRRYHHHGGACCFAAKPTQVAAEVDQGGAAEPGVASANAAVEAKPRKKARSRRGR KGKRSSSSETRTTAVLEEEEEVEVKEKKTEEDGEEGKRKEKAAGLDLDEVMAVSPVGL GRRSRQIFDEVWRKFSRLGQMSSASSTALAEEEQAVLIRGGPMCEFTVPGAQDTTVLV VGATSRIGRIVVRKLMLRGYNVKALVRRNDAEVIDMLPRSVDIVVGDVGDPSTVKSAV SGCSKIIYCATARSTITGDLNRVDNQGVRNVSKAFQDYYNELAQLRAGKSSKSKLLIA KFKSPKSLNGWEVDQGSYFPNTFASRFDEGIDASFDFSEAGQAVFSGFVFTRGGYVEI SKRLSLPLGSTLDRYDGLLFSVGGNGRSYVVILETGPLADTSQSKKYFARMTTKVGFC RVRVPFSAFRPVNPQDPPLDPFLVHTLTIRFEPKRQRPGDGSQSATDPRNFELILEYI KALPTGQETDFILVSCSGSGIEPNRREQVLKAKKAGEDALRRSGLGYTIVRPGPLQEE PGGQRALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCYEYVAKQGNELYE LVAHLPDKANNYLTPALSVLEKNT</aaseq>

Gene Sequence

<dnaseqindica>3946..4017#3787..3834#3630..3707#3485..3541#3183..3248#3006..3095#2632..2709#2423..2527#2176..2311#1992..2067#1668..1872#1344..1556#50..772#ccagtgcaatctcgcaaccaattttccaccgccgcagcagcatccatccatggccgccgccatcgtggccgcgcgggcgcctccgggcggcggcggcgccgcagccgtcatcgcgtaccaccactgcgcgtccccctcgcgggcgctcccgctggcggccggcccgtccgcgggaggaggggtggtggtggggaggagataccaccaccacggcggcgcgtgctgcttcgccgcaaagcccacgcaggtggccgccgaggtggatcagggaggggcggccgagccgggtgtcgcttccgccaatgctgcggtggaggcgaagccgcgtaagaaggcgcgatcccggcgaggaaggaaggggaaaaggtcgtcgtcgtcggagaccaggacgacggcggtgctcgaggaggaggaggaggtggaggtgaaggagaagaagacggaggaggatggagaggaggggaagaggaaggagaaggcggcggggcttgacctggacgaggtgatggcggtgagccccgtggggctagggcggcggtcgcggcagatattcgacgaggtgtggcgcaagttctcgcggctggggcagatgtcgagcgcgtcgtcgacggcgctggcggaggaggagcaggccgtgctcatccgcggcggacccatgtgcgagttcaccgtccccggcgcgcaggacaccaccgtcctcgtcgtcggcgccaccagccgcatcggccgcatcgtcgtccgcaagctcatgctccgcgggtacaatgtcaaggtcagctatatctaatctatactcccctgctaattatactagttccagttcaaataatatatctgaactgatctgatcttactgacaaatgaacattccaagggactggttgagagtgtgatttaagaatttaacatgatctgtgatgtttcatatcatcaatgtctctgtctagaatccagattgtttccttccatgtatgcaacttcaaaactgttgctatactgaaaagtgataattgatggctttgaactatagttcctgatatcttcatctagttggttctagatatgtgtgtgcatttagttgtctgcttcatccccatttgctgaattctccaggatttaaggtctgtgttgaatatgacaaagtatgcaacgtgtaatatgcatacgtactcggtactccctaacaatgaacatggagaaacaaagagtgatcaatagcaaaattggaaaacatttcgatgttggaaatggacagtgaacagtaatgtttctgaaaatttgcaaattatttacagatggtggttatctgatctgttcgtaccatggttttaacattataacaggctttagttagaaggaatgatgctgaagtgatagatatgctcccaaggtcggtggatattgttgtcggtgatgttggtgatccttcaactgtcaaatcggctgtatcaggttgcagcaagataatctattgcgcaactgcacgctcaactattactggagacctaaatagggttgataatcaaggagtaaggaatgttagtaaggctttccaggtattccttatgacctcaatttatcatcttaccggtagtaatgttattgattttgagagtattcttgcctcattgaaaatttctttaactcagctctgcattacgctgcaggattactacaatgaattggctcagcttagggctggtaaaagcagcaagagcaaactcctgatagcaaaatttaaatctcccaagtctctgaatggttgggaggtggaccagggatcttattttccaaacacatttgcttctaggtttgatgaaggtatcgatgcatcatttgacttttcagaggctggtcaagctgttttctcaggtatcaccttctgctatgtagatttaggactttcttctctgcaaatgcactaagtttgagttgcctacacgtgctgatttcatttccatgtcaattcttacgaaacaacctttaatcaggatttgttttcacaagaggtggatatgttgagatatcaaaaaggctatctcttcctttgggatctactctagacaggtatgataagatttgtatattttactaagaagattctttgattttattttcgtatattatacatcagactgaaaactttggcatgttattctttcactgtatacaaaggtatgatggcttacttttttcggtgggaggaaatggaagatcatatgttgttattcttgagactggtccgctggctgacacctcccagagcaagaagtactttgctcggatgactacaaaagtaggattttgtagggtaagttgtgttcaataaccaagctgtatgatcagatgcttgtgcttccatctaagaaatcaaagaattcaggaattgaccatttcttttgccttctctgtttttctgcaggtgagggtaccattttcagcttttcggccagtaaaccctcaagatcctcccctagacccttttcttgtgcatacactaacaattaggtttgaacccaaaagacaggttagtacaatacaatgaatttatttgaaatgttaccttaaggtaataaatgtagagatgattaaacatgaaattggtggctcagcttttaatgtattctgcagagacctggtgatggatctcaaagtgctactgaccccagaaattttgagcttatattggaatacatcaaagctttgcctgtaagttgttcctagtttgattgtctgtggcatgcttcgctactttcatttccttccctgtttaattcttgttgtgtccaactcttcttttaatttaaataccttcaacattcccactgattattttggtaggaaacatgacctctttttttttgtcagaattgaaaaggcaattcaattaggttataaaagcatctctttatttcttttgcagactggtcaagaatttttgtcagaattgagaaggcaattcaattaggttatgtttaaaaagcatctctttatttcttttgcagactggtcaagaaacagacttcattctggtctcatgctcaggttctgggattgaacctaacagaagagaacaagtcctcaaagcaaaaaaggttttaattttaataaccatttaaaatgcttacacttctctaattcaaatgttcatcaaattattaaggacctttgaacatttctaggctggagaggatgcattgagaaggtcaggccttggatacacaatagtacgccctggtccactgcaggtatggtgtattgatagacctcctgacagaaatgcttcactttgagctcataagtttacattctgctttcagattatttattaagctaatagcactccacttccattctatgttcaataatcattagaacataatgtgttagtagaagatattaattagagatcagtatttgcagactgctgtatacatatcattaaaaccagttgcatcatgatcactcaaccttttttttccaggaagaacctggtggtcagcgtgcattgatctttgatcaagggaacagaatctcgcaggtgaaccttcataaactataggagtctgcttttcccataatatgttgatagcatcatacataaataactgatctttcttgtaatatagggtatcagttgcgccgatgtagcagatatttgtgtcaaagcattgcatgattccactgctaggaacaaaagttttgatgtaagcaactttcttccactttcttctgtataggatgatcagtgttgcaatactaacttgttattccctactcacttaggtatgctacgagtatgtagctaagcaagggaatgagctatatgaacttgtgagtatttctgaatccacaactgatggaactcttaaatcttaatctcctttctccaattgagagttgcacccccaattctaatttattttgtactgaatgtttctgcaggtggcccatttaccagataaagctaacaactatcttacaccggcattatctgttctagagaagaacacctgactgatatgtctctgagactcagatatttgccaaaatcaaaatgtgtatacttttcaacttgtaaagcatatgtttttttccccatagaagccgtgtggagttcacatgatatgccactttggccctttttgtaaagatgatcaacagattgacttcaggaaacaatttcgatggctgtaatgatatattcttccgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0704700, RefSeq:Os06g0704700