Os06g0705900

From RiceWiki
Revision as of 20:28, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0705900

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001065055.2 GI:297606472 GeneID:4342007

Length

2655 bp

Definition

Oryza sativa Japonica Group Os06g0705900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30705472..30708126

Sequence Coding Region

30705472..30705522,30705626..30705731,30705827..30706044,30706468..30707012,30707331..30708126

Expression

GEO Profiles:Os06g0705900

Genome Context

<gbrowseImage1> name=NC_008399:30705472..30708126 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30705472..30708126 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctccacggagcagcaagaacacgcagtggcgctgcttgaccccaaggtagcagaagaagaagtatacacaacggatgggtctcttgacatcgatggcaacccggcgctgaagcatcgcactggtggatggagagcatgccgctcgattcttggcaccgagttctgccaatgcctggcctacttcgggatgacgatcaacctcgtcacctacctcaccaccgagctgcatcagagcaatgtcgccgccgccaagaacgtgtccacgtggcaggccacctgcttcctcacgccgttggccggagccatcgtcgccgattcctactggggaaagtaccacaccatggtggtcggctgctgcatcggcgtcgctggcttgctcatggcgtctctctcagcgcttctgccgctgctgatcaagaacatttcgactctggccatggcttcagctcaagaattcgtcttgtttctcggcctgtacatgatcgctttcggggtgggcgggctccggccgtgcctgatgtccttcggcgccgaccagttcgacgccggcgacccatcggagcgcaatagcaagggctcctacttcaactggtacctattcaccatgaactgcgcctccgtgatatccaccaccgccatggtgtggttgcaggaccactacgggtgggccctgggcttagcgattccggcgatggttctcgccgtcgggctgtccttcctggtcgccgcgacgccggcgtacaggtttcagcgaaaccgtgggagccctttcacaagagtctgccaggtcgtcgtcgccgccgtccgcaagttcaacgtcgcgccgccggccgacgtcgcccttctctacgaggtgccggaggacgactgctccatggaaagagttaagaggatcaaacacaccgatgatctccaattcttcgacaaggccgccgtcgtgacggcgtcggatgaggaggcggcgggcgatccgtggaggctttgcagcttgacgcaggtcgaagagctcaagattctcgtcaggatgctgcctctgtgggcgagcattgccttcttctacaccgggacggcgcaggtcaattcgatgtccgtcgagcagggcatggcgatggacgcccgcgtcggctccctccgcgtcccgccggcctcgctggcaaccttcgagttgctcacctccatggcactgatcccgctgtacgaccgcgcgttcgtgccggcggcgaggaggctcgccgggagggagaagggcattcccgacctgctgaggatcggcgccgggctcaccatggccgtgctcgccatggccgccgcggcgctggtcgagacgaagcgcgcccgcgctgcgcggatgggaatggagaagacgagcatcgtgtggcaggtgccgcagtacgcggtgatgggcgtgggcgagatgctcgcctccgccgggcagctggacttcttctacagccaggcgccgcccgccatgaagacggtgtgcatggcgcttggtttcctcgccgtcgcggcaggggtatacctgagctcgctcgtcctgaccgccgtgtcgtgggcgacggcgaccggaggccggccggggtggatccccgacgacctcaacgaggggcaccttgatcgcttcttctggatgatggccggactcggctgcctcaatctggtggcgttcacgagctgcgccatgaggtacaaatcaaggaaggattgttaa</cdnaseq>

Protein Sequence

<aaseq>MASTEQQEHAVALLDPKVAEEEVYTTDGSLDIDGNPALKHRTGG WRACRSILGTEFCQCLAYFGMTINLVTYLTTELHQSNVAAAKNVSTWQATCFLTPLAG AIVADSYWGKYHTMVVGCCIGVAGLLMASLSALLPLLIKNISTLAMASAQEFVLFLGL YMIAFGVGGLRPCLMSFGADQFDAGDPSERNSKGSYFNWYLFTMNCASVISTTAMVWL QDHYGWALGLAIPAMVLAVGLSFLVAATPAYRFQRNRGSPFTRVCQVVVAAVRKFNVA PPADVALLYEVPEDDCSMERVKRIKHTDDLQFFDKAAVVTASDEEAAGDPWRLCSLTQ VEELKILVRMLPLWASIAFFYTGTAQVNSMSVEQGMAMDARVGSLRVPPASLATFELL TSMALIPLYDRAFVPAARRLAGREKGIPDLLRIGAGLTMAVLAMAAAALVETKRARAA RMGMEKTSIVWQVPQYAVMGVGEMLASAGQLDFFYSQAPPAMKTVCMALGFLAVAAGV YLSSLVLTAVSWATATGGRPGWIPDDLNEGHLDRFFWMMAGLGCLNLVAFTSCAMRYK SRKDC</aaseq>

Gene Sequence

<dnaseqindica>1..51#155..260#356..573#997..1541#1860..2655#atggcctccacggagcagcaagaacacgcagtggcgctgcttgaccccaaggtctcgctgttactcaatgccgatgccatgtctatttttactatgcaatttgcctgaaatttcattgcagccttgcctgaattcaacttggctggggttgcaggtagcagaagaagaagtatacacaacggatgggtctcttgacatcgatggcaacccggcgctgaagcatcgcactggtggatggagagcatgccgctcgattcttggtaatttaatttagtgtgttttgtgatgttttctgtttgaaaaaggtgcttaatttcttgttcatgtgattatctgagtgcttttggatatataggcaccgagttctgccaatgcctggcctacttcgggatgacgatcaacctcgtcacctacctcaccaccgagctgcatcagagcaatgtcgccgccgccaagaacgtgtccacgtggcaggccacctgcttcctcacgccgttggccggagccatcgtcgccgattcctactggggaaagtaccacaccatggtggtcggctgctgcatcggcgtcgctgttagtcacaaccaattcccactacaatcagtaactgtatactgttgaggggatattcacttgttggttgtatatcaaatgattatggaaaaaaaaattaaaaagagtattaatatgtgatgtatcattacacaaacatataaatgcaaatttaacttttatatattgcaacggaaaaaaattgaattacagctagttaacgtatattcagtatttttttttagttgtgacatgtagaaattaaattttaacttgcatatttgtagaatgatatatcacatattaatacgtttttttaatatttattttttttataactatttgagtgacattaaaacaaccagtccacatccccttgagaatttaaaacctactccatgaattcagctcgggacctcaagtttggtcttttgctctgtgcagggcttgctcatggcgtctctctcagcgcttctgccgctgctgatcaagaacatttcgactctggccatggcttcagctcaagaattcgtcttgtttctcggcctgtacatgatcgctttcggggtgggcgggctccggccgtgcctgatgtccttcggcgccgaccagttcgacgccggcgacccatcggagcgcaatagcaagggctcctacttcaactggtacctattcaccatgaactgcgcctccgtgatatccaccaccgccatggtgtggttgcaggaccactacgggtgggccctgggcttagcgattccggcgatggttctcgccgtcgggctgtccttcctggtcgccgcgacgccggcgtacaggtttcagcgaaaccgtgggagccctttcacaagagtctgccaggtcgtcgtcgccgccgtccgcaagttcaacgtcgcgccgccggccgacgtcgcccttctctacgaggtgccggaggacgactgctccatggaaagagttaagaggatcaaacacaccgatgatctccagtgagttgctgttggtgaatttgtagctactcccttagtttcaggttataaaatgtttttgattttggttaaagtcaaactacttcaaatttaacaaagtttatagaaaaaaatagtaatattttgacacaaaataaatttattataaaagtttatttaattattaatttaataaaactaatttagaatgtaaatattactatatttgtctataaacttagttaaaattaaaacagtttaattttaacaaaagtcaaaacatcttataaaccgataaaccgatagtactaattctcaagatgcatctgccatgatcagattcttcgacaaggccgccgtcgtgacggcgtcggatgaggaggcggcgggcgatccgtggaggctttgcagcttgacgcaggtcgaagagctcaagattctcgtcaggatgctgcctctgtgggcgagcattgccttcttctacaccgggacggcgcaggtcaattcgatgtccgtcgagcagggcatggcgatggacgcccgcgtcggctccctccgcgtcccgccggcctcgctggcaaccttcgagttgctcacctccatggcactgatcccgctgtacgaccgcgcgttcgtgccggcggcgaggaggctcgccgggagggagaagggcattcccgacctgctgaggatcggcgccgggctcaccatggccgtgctcgccatggccgccgcggcgctggtcgagacgaagcgcgcccgcgctgcgcggatgggaatggagaagacgagcatcgtgtggcaggtgccgcagtacgcggtgatgggcgtgggcgagatgctcgcctccgccgggcagctggacttcttctacagccaggcgccgcccgccatgaagacggtgtgcatggcgcttggtttcctcgccgtcgcggcaggggtatacctgagctcgctcgtcctgaccgccgtgtcgtgggcgacggcgaccggaggccggccggggtggatccccgacgacctcaacgaggggcaccttgatcgcttcttctggatgatggccggactcggctgcctcaatctggtggcgttcacgagctgcgccatgaggtacaaatcaaggaaggattgttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0705900, RefSeq:Os06g0705900