Os05g0372400

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Revision as of 10:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0372400| Description = Lipase, class 3 family protein| Version = NM_001061897.1 GI:115463524 GeneID:4338595| Length = 3596 bp| Definition ...")
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Gene Name

Os05g0372400

Description

Lipase, class 3 family protein

Version

NM_001061897.1 GI:115463524 GeneID:4338595

Length

3596 bp

Definition

Oryza sativa Japonica Group Os05g0372400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17948884..17952479

Sequence Coding Region

17949110..17949299,17949384..17949472,17949583..17949777,17950429..17950590,17950674..17950746
,17950994..17951061,17951151..17951198,17951288..17951353,17951483..17951553
,17951890..17951956

Expression

GEO Profiles:Os05g0372400

Genome Context

<gbrowseImage1> name=NC_008398:17948884..17952479 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17948884..17952479 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcggcggagatggctgcaggccgcggttctgtgttgcctgctggtgctttgctccgggagagaacttaagactaaacacaccccaatatacaactcgaccttagccaggacgcttgcggaatatacatcagcagtttatacagctgacttgacacaactcttttcgtggacctgtgaaaggtgttgtgacttaacagaggggtttgaggtaatagaactgatcgtcgatgtgaaaaattgcttgcaggcatatgttggttatgctagtgatatgaatgctgtcgtagttgtgttcagaggcactcaagagaccagcattcagaattggatagaggacttgttttggaaacaacttgatctggactacccaggcatgcctcaagcaaaggtccacagtgggttttattctgcataccataacacgacattgcgcgatggtgttgtcaatggcattaagaaaactagggaagcatatggtaatattcccatcatggtaactgggcattcgatgggaggagctatggcttcgttttgtgcgcttgaccttgtggtcaactacaggttaaaggatgtgacactgataacatttggacaacctcggattggaaatgctgtgtttgcttcacattttaagtgtcatttgccaaatgcgattcgagtgactaatgcgcacgatattgttcctcatttacccccatactaccactacttcccacagaaaacctatcatcatttcccacgagaggtatgggttcataatgttggacttggaagcctagtctattcaatagagcaaatttgtgatgactctggagaagacccaacttgcagcaggtctgtgagtggaaacagtgtgcaagaccatataaactaccttggcatcagcatgcatgccgaggcatcgggatcttgcagaattgtcacaggtgacaataaactgcagtataagatggacagcgatggcaacattgttttctcgaagcaacctggtttatcagttgatcagttgcatagttcacagtga</cdnaseq>

Protein Sequence

<aaseq>MERRRWLQAAVLCCLLVLCSGRELKTKHTPIYNSTLARTLAEYT SAVYTADLTQLFSWTCERCCDLTEGFEVIELIVDVKNCLQAYVGYASDMNAVVVVFRG TQETSIQNWIEDLFWKQLDLDYPGMPQAKVHSGFYSAYHNTTLRDGVVNGIKKTREAY GNIPIMVTGHSMGGAMASFCALDLVVNYRLKDVTLITFGQPRIGNAVFASHFKCHLPN AIRVTNAHDIVPHLPPYYHYFPQKTYHHFPREVWVHNVGLGSLVYSIEQICDDSGEDP TCSRSVSGNSVQDHINYLGISMHAEASGSCRIVTGDNKLQYKMDSDGNIVFSKQPGLS VDQLHSSQ</aaseq>

Gene Sequence

<dnaseqindica>3181..3370#3008..3096#2703..2897#1890..2051#1734..1806#1419..1486#1282..1329#1127..1192#927..997#524..590#ggttttaagagtttgagggtcgagatacccggttttgtggtctagggtcacggattaagggtcacaaagtgaacttattcctcgtctcgaacactgggaggaaacccggcccacaaacctaatgatgccaatttgtaggcccgtcccggcccggcccacttgcagtctgacacctacttgcctttgccttaatcctcctctctctctctctctctgtagttttcccctttggttttgctctgccgtacgcctctccaactcgaatcatcccatctgtcggtgatttccgtccaatctttgatcggattccgggggccctcatcatcgtcgagctcttcggtcgttcgatcgggcgcgcgaaattcttccggcgctgattttgacggctccggccgccggcggcggttggttggttggttcttggcccggattttcggggagatttgagggggcaggtttctcctcgccccgcggtggctgtgtgggttcttggattcgttgtttggtgactgtttaagcggggatggagcggcggagatggctgcaggccgcggttctgtgttgcctgctggtgctttgctccgggagaggttaggttctatcagctacttgtgttcttgctgtgatatgattgatttgggatagtttctgataattagttcagcaagattcgctttaggggagtgcggatgttattactgtgcataaacataaacccatttagctctagaagatcgctgttcattagtagttgcaatttgtgtaaagctagtaattgcttattttgatcatacaattgattagctctatctagatgaacaatgttcattagcagtttgaagatgcgtcgtccatacgttgatcatacaattgcacagattcttggtctgtcctgtcctgatgttggttctgatttcatgatgtagaacttaagactaaacacaccccaatatacaactcgaccttagccaggacgcttgcggaatatacatcagcagtaagttcatttgctgtttgatctctagcatcgtccactttggatttttttaatacataattacatattagtgaatacctagggtgtctagtgtaatatggagttgttgaatctggtgtcattgtacaggtttatacagctgacttgacacaactcttttcgtggacctgtgaaaggtgttgtgacttaacagaggtagcatgatcatctcattaaagtttagtcaacttcatctcattatatgtagcttggtatgactgattgatattttttttatgactcaggggtttgaggtaatagaactgatcgtcgatgtgaaaaattgcttgcaggttatttcctctaccttcagctattctttgcctggatttctgtaatagactattcattagcattgatggtagtagttttgatgaatcaggcatatgttggttatgctagtgatatgaatgctgtcgtagttgtgttcagaggcactcaagagaccaggtacattgcatatcacttcatgataagtgtttactttttttcaaagtactaagattgtcagtttgttttaaaagcattcttgaagttcatgttcttcacagaattttattttctgttcaatattattaatgcgtcaaatatttcaaattgatacatgatggcttgactccctataaacaaataaatgtgacactgttgaaatcttgatacttttatgttaagtaacactacccattctatatctcagcattcagaattggatagaggacttgttttggaaacaacttgatctggactacccaggcatgcctcaagcaaaggtgaacatgctaatgcatctatgattctatgataaaaaccctcttctgagcaccattagtattgatggtctatctgtttataggtccacagtgggttttattctgcataccataacacgacattgcgcgatggtgttgtcaatggcattaagaaaactagggaagcatatggtaatattcccatcatggtaactgggcattcgatgggaggagctatggcttcgttttgtgcgcttgaccttgtggtgagtattgaattttgtttaaataagatatttaattttgagcttctttatgaagttctttcttttgaaattattgtctatgaagttatctgctctgtgaagcattataagctgaacagagtagagcaggttacatcttttaggggctgaattcctcttcagatgttactcctgacagattctcaacgcctaaattctcatggcgtcagatttctaacatcagagaaagcaatgacagacaattaattccactgttctcaaattaaagttactctctagactttactggttaatattgctaatatcgattgcaatgaataaactctttacatttatgaattgaatatttcgaacattcgtttggtagttcctaggactagcagcataggctaagaacttcattcacaccatattgttctaagctgcttcttatatgaccaattatgtggggtcatatttttgtgttgatgcaatgtgatacataccagttgcttcaagcatatgacgtataactcttttgttaggttattgtagatttattttcctctttcttgaatcatctcgttttttagccatatgagatgaagaaaatttacttcatccgcttctggttcagccagcatgttaacacatatttatttgtttttataggtcaactacaggttaaaggatgtgacactgataacatttggacaacctcggattggaaatgctgtgtttgcttcacattttaagtgtcatttgccaaatgcgattcgagtgactaatgcgcacgatattgttcctcatttacccccatactaccactacttcccacagaaaacctatcatcatttcccacgagaggtatgttcttgcccattgacatgcacctttgctgacagagaaatcgagtattattcttgatgcattagagatgtgactaaagtcggttctcttttatctgtctctcttaggtatgggttcataatgttggacttggaagcctagtctattcaatagagcaaatttgtgatgactctggagaagacccaacttgcagcaggttcgtcttgctcacgcatatgaatcttgtttgaactttaaactccttatgactttgttgtaccttttatcgttttatacccaggtctgtgagtggaaacagtgtgcaagaccatataaactaccttggcatcagcatgcatgccgaggcatcgggatcttgcagaattgtcacaggtgacaataaactgcagtataagatggacagcgatggcaacattgttttctcgaagcaacctggtttatcagttgatcagttgcatagttcacagtgagcaaactcatgatgacaggaatcttccatgccctctatgtaactgtatgatcacaccacaggaggatattggaagaacaaatttgtgtatagttctttgtacagcatgtaaagcattatagatactgtacgaacgtgctcttggctggactaatttatcatgagaatgtcatgcaaaagcttttccaagcagaaccatgccaattatcatgttcttatttctgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0372400, RefSeq:Os05g0372400