Os06g0715100

From RiceWiki
Revision as of 20:29, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0715100

Description

Similar to Novel plant SNARE 11 (AtNPSN11)

Version

NM_001188066.1 GI:297725262 GeneID:9267986

Length

3498 bp

Definition

Oryza sativa Japonica Group Os06g0715100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31234703..31238200

Sequence Coding Region

31234987..31235079,31235646..31235720,31235817..31235825

Expression

GEO Profiles:Os06g0715100

Genome Context

<gbrowseImage1> name=NC_008399:31234703..31238200 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31234703..31238200 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aagaaattggttgcaactgatcgctgcatcatggccttgctttttctcattgttgctggagtcatagcaataatagtcgttaagattgtaaacccacagaacaagactatccgagacattcctggtctcgctccaccagttagcagaaggctattgagtattgtagaagacatctga</cdnaseq>

Protein Sequence

<aaseq>KKLVATDRCIMALLFLIVAGVIAIIVVKIVNPQNKTIRDIPGLA PPVSRRLLSIVEDI</aaseq>

Gene Sequence

<dnaseqindica>3122..3214#2481..2555#2376..2384#agtggtagtagtaaagcgaaagcgaacaaaaaggggaaaaaaaaaagaaaaacaagagcgctgtgtcggagaccaccgccggaccaccaccgcgacccctcgatcccggcgatcccacagcattggtcggtccccgtcgatccggccgccgtggggtttggtctggtactctctggtggtggtggtggtggtcgccgtcgtgaacgattcctttttctgcttggattttttttgttgcttttggttgttgtgatccctgtggggctcgggttccggccggtgtaggggaggggagatggatttggagtcggtcaacccggagctcgccgagatcgacggccagatcggcgacatcctccgcgcattgcagtaagctccgaatcttttccgccgtgttctgaaatccgtttctccattttttccatttcaaatttcgatcgcttcgcttgtggtttatgtgtgtttttagtagaggtaatattcattggatctcttgcttgcttgcttgctgtaatgtttgcttatgaaatgcgagcctggaaatcagactgttaacctgcaaaaaataaaaataaaatctttgtagtgtaatgcggcaaaaagacgggtttgacttagatgatagattgataattaatctgcttcatttgtccacagaaatgggttccagaagctggataagatcaaggatgccaatcgacggagcaggcaactcgaagagctcactgataagatgcgggattgcaagaggttatccattcttttcacacatattacgctgcttagtgtagaacagcatcttttgtacagaatgtgggcagttgaaaactatgattacaaatgtgtcacttggaaagagttgagatttggccatagccattgcattactgaattcagtattatacaagttctgatgctgatcagtatctccaaatgcaattgatttttgttcttttgggaaaggatggatctagcagtggcggcatacaatcatacagacatttggttgcttaattttctctgtatacatttttaggcttatcaaggactttgagcgagttgtcaaagatatggcaggaagtaccgatcctgagactgctaggatgcttcatgataggaaacagtcaatggtaccaccgcagaaccttatactatgatataattttatacattcagctttcctgagtcctcaactccctcttaacctgactcttcgtgttttgcagatcaaagaattgaactcctatgttgctttgaagaaacagtgagtttatacctatcccgtgatgtgaaaggctcatattaatggacatgaacctataaggggttgcccttgaactaataatcacttcaccaaattagtctttattataaacttgacagatactgctttggctaacattacatgatacttacatgcaaaagatcgtttggacttcagatatgcaagtgaaaataagcgagttgatctttttgatggcccaagtgttgaagatggctttggtgaagaaaatgtcctgttagcatcaagtaagtagcaactctagggcccttttaagtgcatatggaggtggtctattttttctcaggtgaaatgataagaatattctggcggatatgccatcactagcatgaatatatgcacctctttagatttaatggtcaattatttcttttgtagatatgacaaaccaacagttaatggatcaaggaaaccaactaatggatgagactgatcaagctattgcaagatctaaacaggttatctttactatgttgtgcaagatctagacaagatctaagcaacttgatatatcttcgaaagagaagtgcataatttttttatttcttattggatcaactaggcattttcttgcatttagtatcatgtaatttttctgtgttttgtccctcctataggtacaaaatgtagcttctttcagtttatatatatggcttctaactgagcttgttgcatcattttccaacttagcacgtattgatctttttttgttatttcagttcctttagcttatacaaaaactctttattagggtgtaattttaagtcttacagcaaattgatgtgctctttcccacaaactaagtcacatcattgctttctggcactgatttgttgctgacttctgcagaccgtccaagagaccatcaatgtaggtacagaaactgcagctgctctcaaatcacaggcaggatttctttgttcttctcaaaccagccaatcatgctgtgtaacctggatataccagagctaacttcggttatttcttattgaccagacagagcaaatgagcagaattgttaatgagctggattccattcatttctccattaaaaaggcatcacaaatggtgaaagaaattggtaggcaggtaagtaccctctcaacgatatctattaaaaaggcaccgataatctgtcaaccccattattgtttattcatactgttcttaaatgtaggttgcaactgatcgctgcatcatggccttgctttttctcattgttgctggagtcatagcaataatagtcgttaaggtgagtgcttagattttccatatatctgcttacctgacagttaattttggcattccattcttccactcttggaatcccttcacacaatcttaccatttcactgcttattatatatttttttaaaaaaaaacaaaaacaaaatggcgatagaagtgtgccaattaagcagttcatggccccactgtcagctatggaacagacatttccatttattctcaatataacggtgtaaggtttttagatgagatcagtcaaccatttctcgatcaatttatccttggtgaacttcccttatcatggtgtctatctccgtcctttgtggattgaacttttttgtacagttagtagtaaacaaagaggtcataaggcgagatgaggggatgagagaactacccttgcatcaatattatttttgctttggtgaacagctgttagccctcccctagtgagaagctaaaaaaaaacccagaaaggaaaaataatttttggccctcttctgggtttcttctggtcggaatattcagtttttatggtgaatggttcatgatcatagtgtttcactgcagattgtaaacccacagaacaagactatccgagacattcctggtctcgctccaccagttagcagaaggctattgagtattgtagaagacatctgaacttcatacatgtgaacaaatcaaccaagagcagcttgtgctgtttaactcgaaggtcgcaactactacttgaacatgatgcacagtgttgtaatactatacccatgggatccgtgtgcgaggtactgtaaaattgtacgagtatgttatgactctgacaagcaggtttgcttgtaagaactgtattctgtgaacattcacatatgtacacgagcatatcaatcttttttaagagtgacagcagcgtatggatcatccaataatacagcgttttttgcaaatag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0715100, RefSeq:Os06g0715100