Os05g0373500

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Revision as of 10:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0373500| Description = Conserved hypothetical protein| Version = NM_001061903.2 GI:297604407 GeneID:4338601| Length = 3746 bp| Definition ...")
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Gene Name

Os05g0373500

Description

Conserved hypothetical protein

Version

NM_001061903.2 GI:297604407 GeneID:4338601

Length

3746 bp

Definition

Oryza sativa Japonica Group Os05g0373500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18010166..18013911

Sequence Coding Region

18010166..18010180,18010251..18010331,18011240..18011611,18011705..18011814,18013812..18013911

Expression

GEO Profiles:Os05g0373500

Genome Context

<gbrowseImage1> name=NC_008398:18010166..18013911 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:18010166..18013911 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctctccgcgctgttcctgctcaagcccttcgccgcccaccgcgcccgcgcgggggcgccgccgccgccggggcctcccggcgacgcgttcgcggctgacatagtggcgagctttatgctacagaagacagtttctgagttgagtggaagtacttctaagcttgaatttgacatctacggggaaattggcattcctaactctactgtggctgtaaatttcctacaaccaataggtgcaccaaactggacaaatgtcattttcagcattgtgccttatccaaaatactcaagtatatcttccatgtacttgagcattcttagggcttcttttatgtccctggttgtagagcagtcaacactccacttgacagagtctctgtttggggacacatcgttattcgaggttcttaagttccctggtggaataaccattatccctccacaagctgcttttcttctgcagaagccttacgcatccttcaacttcactctgaacttcccaatctataaagtgcaaggtagaatgaatgagttgaaagaccaaatgaaggcaggactacagctcgatccctatgagaacctctacatcaaactaacaaattcagaaggttcaacggtgagaccaccaacaattgttcaggcctccattgttcttgaagaaacttgggcctga</cdnaseq>

Protein Sequence

<aaseq>MALSALFLLKPFAAHRARAGAPPPPGPPGDAFAADIVASFMLQK TVSELSGSTSKLEFDIYGEIGIPNSTVAVNFLQPIGAPNWTNVIFSIVPYPKYSSISS MYLSILRASFMSLVVEQSTLHLTESLFGDTSLFEVLKFPGGITIIPPQAAFLLQKPYA SFNFTLNFPIYKVQGRMNELKDQMKAGLQLDPYENLYIKLTNSEGSTVRPPTIVQASI VLEETWA</aaseq>

Gene Sequence

<dnaseqindica>3732..3746#3581..3661#2301..2672#2098..2207#1..100#atggcgctctccgcgctgttcctgctcaagcccttcgccgcccaccgcgcccgcgcgggggcgccgccgccgccggggcctcccggcgacgcgttcgcgggtgagctagcctcgccgagatctcggtctcggcggcctcttgctttggttttcttttctgcaaataaattaatacataaataaacagttcggtttcgtcgtacggacgctatgagtattagatagtgattttgggagtagttcgtttacatttgagcctatttcgtttgcacgaatttgcgtggcgcgtacgatctgtagcaaatgttgcgccttatagtggaaaccggaatcgaattcgatgtatagtgtcaatcatagagcaagttgggcatttccttacgcttgataaccttcttttctttttcaaccatatgctgtttgcctggcaactttggagacatatggacggtttgggccgcatagtgtcatagtcacatgtttgtgctgtttatcaatgtgtcatgttagcctttctgaggaagttgcctcttagatttttccaaccccactttttttttttttttggacttgtagattcttgctacagaacaggataggaaatgctgggccaacctttctttgtgccaattgtggaaaatgttatattcctgaatggcttgttgagttgccatacctagttcagctagtatgctctcgtgcgtgtggtgctgggtgggtgatcttacatggatgatagattgcctatttgtgcagcatattccattgctagccttggtggttctctagtcatggactttaatttgtgtgtgctgttggtgttgatttatagacttttctgtttcctgaagtgctcaatttgttaataaattgtacgttcaactgttcatgttcaactatggagtatcaagctttgttttattccatttccattggaatatgacaatgataaaatgcaaaaaagaaaaactgaaaaaaaaaaggtgtcatcttgtcagatactcaaatgatgatgtattgatgccagatgctctcaacatagtgaatttttccataaaagaaaatgcatttttgcaataggtgacattaaataacatgacaaaaaatatcacgcaagaaataaggtggattgataacctagaagaccttgacaaaagttgccgcataaaaaggtaatgaataatgagttatcaaatggtgatgttaaatggtcttgagagaaactgctgtgtagacacaatattgctttattaaaacgtgatgctagaagaccccaacaataatctttaggatagatgaggttttggtttattcgaaggagccgacaaaacttgccgcaatagagaagcgatcaatttattgagtgctgaagttagaaaatcacaacaaaaatttgctgcagtagaaagaggtacccgatcaaattataaaatagtcatgttagaagatgtcgacaagaaaagctttcaaaagagaaaacatactttaaatgatgataattatgcaactcatgcatacagctttgcgagtgcaagataaactgcaccatgcaaaaaaaaggtgagttggatctggcagggcatgtgggaataaagcaggaagtgagatgaaatattcaggaatgataatgttgaatgtaaaatatcatctggacgtaaatgtccctgctgaatagttgatatgcaaacaatttgcatagtctctgttgcatataggatggtgttcatgcatttgacttgatcaggagaccacattttgaattataagtatgatcaacaattttgaacacccatgtcctttcaatgaggtagtacttaggtcttccacttttacagttagcttatgaattagttcttcaaatatttatttcagtagtttacttgtgaaatatacttttccaactactccttttttctgcttttagcatgagccctctaaatttgcagcaagataacagaatacagccattaaaatcagatcaatatttcatatgctatgagaactcactctgatctaaatagcattatctatgtgttttcagttggaaattttagatggaaattttcactgcagtactcttactggttcttttaacagctgacatagtggcgagctttatgctacagaagacagtttctgagttgagtggaagtacttctaagcttgaatttgacatctacggggaaattggcattcctaactctactgtaagacagagattctgcaccttattcacatgtttcttgtcatgtacagtttgtcctatgttgtatcagactgatttgtaaatgaccatgcaggtggctgtaaatttcctacaaccaataggtgcaccaaactggacaaatgtcattttcagcattgtgccttatccaaaatactcaagtatatcttccatgtacttgagcattcttagggcttcttttatgtccctggttgtagagcagtcaacactccacttgacagagtctctgtttggggacacatcgttattcgaggttcttaagttccctggtggaataaccattatccctccacaagctgcttttcttctgcagaagccttacgcatccttcaacttcactctgaacttcccaatctataaagtgcaaggtagaatgaatgagttgaaagaccaaatgaaggcaggactacagctcgatccctatgaggttggtaagaatcagtttaatttcaatttcttaacactataacaatcattctatgatgttaatatgttataatttagttttatacacttgttgccaacttgcaacaaaattgttgtgtactagaaatatttggatgcctgtttcttgttacttccctggtcaggaatatatagtgctaagatataagcaaactgttttttttttgtctttttatcactggtatattgaacctatttaggtctgtgaaaatgacatattcccatatcataataatattacaattttttttgtgacatagttggatgttgcagacagcgtgcataccaaaatgccacaggtttttttttccatataaatatcatctctttcataagccagttcccctactctgccagacaccgatacccctccatgagcttcagcatgttattgattgattccatgatgaatactgttttgcctattcagctctctaaaaagtccatttttttgttccatggtgatgaggagctaaaagattgagtacattaaaataccagtttcaagaaaaaaaaaagggtagcttacaacatatattgttgtctttgcatactttattgaagctaaaacatttgagaatggaaaacaaacagatagctctactacataatacatattccctgtgatacaagtggtctatcacaaaagtaattaaaatgtcacaagttatgcgtgattttcttcgtgttattatttattccacacttgccctaggagtcttaagacccttgatgcttattttgttgtatgttagaatatctatggtgggagtcaataattactagtctactgggtcacagaaactggtgcacgccattggatctctttttttgtctattgaatttaatttcaactcttgtactttgcagaacctctacatcaaactaacaaattcagaaggttcaacggtgagaccaccaacaattgttcaggcctccattgttcttgaagttggtaatcaccagccctcccttccaaggatgaagcagttggctaaaacaattgctaattcatcttcaggaaacttgggcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0373500, RefSeq:Os05g0373500