Os06g0724500

From RiceWiki
Revision as of 20:29, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0724500

Description

WD40-like domain containing protein

Version

NM_001065148.1 GI:115470027 GeneID:4342101

Length

2678 bp

Definition

Oryza sativa Japonica Group Os06g0724500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31653910..31656587

Sequence Coding Region

31654143..31654373,31654799..31655518,31655603..31655746,31655856..31656107,31656445..31656540

Expression

GEO Profiles:Os06g0724500

Genome Context

<gbrowseImage1> name=NC_008399:31653910..31656587 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31653910..31656587 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcgggaggggacgcggatggcggggctgtgggagcgcgaggtcggctgcctcccgcccaagctcttcgccaactccgtcatggcctcccaggactttgtgcggtctctcggtgtccagaagaggctgcggaagcacaggggctgtgtgaataccatcagctttaacgaggatgggagcttgctcctgtccggttcggacgatcgggccgctgtactgtggaattggcaagaggggacgcctaccttcgcgttccacactggccacagcgacaatgtgttccatgctctgttcatgcccttctcaggtgaccggagcatcatcacatgcgctgctgatggacaggtgaggcattcgcaaatacaagaaggtggtcgtgtaattacaaatgagctagttgatacagaggtagcagtgcacaaactagctattgagcctggaaatcctcacacattctttagctgcggagataatggctccgtttttctttttgacctaagggagaaatatgttgctgaactctttaaatgcgcagaagttgatcattttggtggtgataccattgaactctatgctattgccatagacccgagaaagcctagttgttttgcagttgctggatctgatgagtatgtgagaatatatgatagccgcaagattgatgtgaatgggaattctagttttggtcggccaattgaatacttttgccctccacatatgatgggcgaaaacaaagatggaatatctggtttggcattctcgcagaccagcgaactattggcatcctatagttatgataacatctaccttttctcgagagaacatggcttacacttcaacaatattgaggtaggaaaacgactcctgatggatgagattgaaggagactgccatataaatacagctccattacccttttgtagagataagttgcctgcacctcaaatattcaagggacatcgtaacaagcacaccatgaagggtgttaatttccttgggcccaactgtgactatgttaccactggatcagactgtggccgtgtatttatttggaggaagaaggatggggagcttatgcgggttatgaaaggggataaacagattgtgaactgtgttgagcagcacccttatgggattgttattgcaaactgtggcattgataaagatatcaagatttgggctcctggtggaagtgagaaccctgacgaggttgagacagattcttgttgctctgatatcagtgagtcctatgactcggtttactttgatgattacatattttcctcggattttgattcatctgaagaggacgacgaagacgacgacgacgatgatgatgatgatgacgatgacgaagaagatggccttagtgttagtatcaacgaagacatgagctatgaagagaaagatgcagccagcgaccatgacagcgatgtttaa</cdnaseq>

Protein Sequence

<aaseq>MPREGTRMAGLWEREVGCLPPKLFANSVMASQDFVRSLGVQKRL RKHRGCVNTISFNEDGSLLLSGSDDRAAVLWNWQEGTPTFAFHTGHSDNVFHALFMPF SGDRSIITCAADGQVRHSQIQEGGRVITNELVDTEVAVHKLAIEPGNPHTFFSCGDNG SVFLFDLREKYVAELFKCAEVDHFGGDTIELYAIAIDPRKPSCFAVAGSDEYVRIYDS RKIDVNGNSSFGRPIEYFCPPHMMGENKDGISGLAFSQTSELLASYSYDNIYLFSREH GLHFNNIEVGKRLLMDEIEGDCHINTAPLPFCRDKLPAPQIFKGHRNKHTMKGVNFLG PNCDYVTTGSDCGRVFIWRKKDGELMRVMKGDKQIVNCVEQHPYGIVIANCGIDKDIK IWAPGGSENPDEVETDSCCSDISESYDSVYFDDYIFSSDFDSSEEDDEDDDDDDDDDD DDEEDGLSVSINEDMSYEEKDAASDHDSDV</aaseq>

Gene Sequence

<dnaseqindica>2215..2445#1070..1789#842..985#481..732#48..143#agaaggcctcgcggcggaggaggaagaaggaagaagaaggcgaggcgatgccgcgggaggggacgcggatggcggggctgtgggagcgcgaggtcggctgcctcccgcccaagctcttcgccaactccgtcatggcctcccaggtcaggtccaatccaaccctctctctctagtttcttccccatcccttttgctcttccgcacggagaccaaatcaccacccagcgctcgcttttctgtttcctccagcgttttaatcctaaaatcgaacagcattaggttacgttagaacaggattaactgtatcctaccgtggaaatcggtgcgttcattaagagaaaccaacttagtactaggttcagagagcacagtcaacgcaacaaaggaggttcagagagaatcacaggtggttgttgcagtagccttgtgatggcttcttttgtttctataaccatggagcatgtttgactgtttgtgcaggactttgtgcggtctctcggtgtccagaagaggctgcggaagcacaggggctgtgtgaataccatcagctttaacgaggatgggagcttgctcctgtccggttcggacgatcgggccgctgtactgtggaattggcaagaggggacgcctaccttcgcgttccacactggccacagcgacaatgtgttccatgctctgttcatgcccttctcaggtgaccggagcatcatcacatgcgctgctgatggacaggtatatatatatattggctcagagtcatccaattttatttttaccatgttttcaccattctcctctacatcgtacacatggtcacatgtttgctgtttccgtgaaacaggtgaggcattcgcaaatacaagaaggtggtcgtgtaattacaaatgagctagttgatacagaggtagcagtgcacaaactagctattgagcctggaaatcctcacacattctttagctgcggagataatggctccgtttttcttgtaagttgttaaacttgctaacttcattcacctgtaataatatctgcttgggttcctttgttgataactctctgtttgatccagtttgacctaagggagaaatatgttgctgaactctttaaatgcgcagaagttgatcattttggtggtgataccattgaactctatgctattgccatagacccgagaaagcctagttgttttgcagttgctggatctgatgagtatgtgagaatatatgatagccgcaagattgatgtgaatgggaattctagttttggtcggccaattgaatacttttgccctccacatatgatgggcgaaaacaaagatggaatatctggtttggcattctcgcagaccagcgaactattggcatcctatagttatgataacatctaccttttctcgagagaacatggcttacacttcaacaatattgaggtaggaaaacgactcctgatggatgagattgaaggagactgccatataaatacagctccattacccttttgtagagataagttgcctgcacctcaaatattcaagggacatcgtaacaagcacaccatgaagggtgttaatttccttgggcccaactgtgactatgttaccactggatcagactgtggccgtgtatttatttggaggaagaaggatggggagcttatgcgggttatgaaaggggataaacagattgtgaactgtgttgagcagcacccttatgggattgttattgcaaactgtggcattgataaagatatcaagatttgggctcctggtggaagtgagaaccctgacgaggtataatctttattttgtgcaaacttattgtgcttctcctgatgttttatgctcattacttgctaaacttatcaggcatggcataaatatgttgggccgccatggtttatacatggcatccgaattaatgttcttgagatgtgcttattaactttttgcatgaagctagggtgtgaatgttagctgacttgattcatatagtattttttatatgtaaaatcaccattatgaatctgaggtaccaggaaatgagaaaaaaaaaagaggaccaaatttgcaggcttgtagaaagtagctctatctgtatgttttgtactgctgcatcaatgatattagaattatgatatatgcgatatcacataatgttttctaccggtgcataaacgaaattagtgttctgatgtatgcggtactatggtttgcaggttgagacagattcttgttgctctgatatcagtgagtcctatgactcggtttactttgatgattacatattttcctcggattttgattcatctgaagaggacgacgaagacgacgacgacgatgatgatgatgatgacgatgacgaagaagatggccttagtgttagtatcaacgaagacatgagctatgaagagaaagatgcagccagcgaccatgacagcgatgtttaaaggttgcattcagctattatgagaccgtaggatggttcagtcttagaacatggtcagttaggggatcatcgacagttttgtatgatgtatgccttaggttgttttatcatgtgttcctttctcagtcctcggccgtattgcttgtacatacatatacatatgcctgagatagctaagcaaaagcatacttacatgtggacaaatttgagtggatggagaattttgtgtatatt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0724500, RefSeq:Os06g0724500