Os05g0376000

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Revision as of 10:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0376000| Description = Glycoside hydrolase, family 19 protein| Version = NM_001061914.2 GI:297604414 GeneID:4338613| Length = 2633 bp| Def...")
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Gene Name

Os05g0376000

Description

Glycoside hydrolase, family 19 protein

Version

NM_001061914.2 GI:297604414 GeneID:4338613

Length

2633 bp

Definition

Oryza sativa Japonica Group Os05g0376000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18154593..18157225

Sequence Coding Region

18154593..18154632,18155084..18155142,18155381..18155518,18155644..18155684,18156032..18156170
,18156605..18157225

Expression

GEO Profiles:Os05g0376000

Genome Context

<gbrowseImage1> name=NC_008398:18154593..18157225 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:18154593..18157225 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccggtcaggggagaaagagccgcgctgcctgcgagggccgcgtgcgggctccgggctgccgccggcacgcccgcgcccatctgggttcccgttggcgggcgcgcggtcccttgggccgccgccgccgccgtggaggtgggctgctgcccaccgctctgcccgctcccgtgcccttcctcttgccagctcctcaagctccctgtcggcgatgatgtcgccggcgatggagccgttgatgctgctgcgcaaggtctcaacctctacctccgccgcacgtgccgcatcttccgccgcctccgcctccgcctccgccctggctgctgccaactccgctgccgccagtctggctgcccttgctgctgctgcaacggtctaagctgttgctcacctgcgctcttctgctgcggcgagctcggcgtcctgctgacgccgagtgctcgaggcgaccgaacgccgagaccgagcgtcggacatggcgcacctgcggggggctgctgcgtggagagggggaagggaaaggggaaggaggagcaaccggtgctgctgctgctgctggctgagagctcaaccgagcttgggaaggggtggaacaagagatgtttagcctacaggaaagatgaagatgttaggcaccccccaaggagagttgttcagggtggttatggtgcatacaatgcatacataacagctgctaccagatatgcagctttgggtacaccaacatcgtatgatcatccaggaccagcttatggaaatcgtgttgcacagagaagtcatgaaattcttggacaggaggttgctgtggacacagctgagccacttgagggtggttcaggtggaggttacttggaacctgcagaggcatatggaccatatggagcttatggctcattactgccttatggcagattctctggtagccttggttatgattatggttatggccccagtggaaatagtagcaggtcaagaccagaatctcgatacagacccttcggtgacattgctatggcaagttacggtgtgacatag</cdnaseq>

Protein Sequence

<aaseq>MAPVRGERAALPARAACGLRAAAGTPAPIWVPVGGRAVPWAAAA AVEVGCCPPLCPLPCPSSCQLLKLPVGDDVAGDGAVDAAAQGLNLYLRRTCRIFRRLR LRLRPGCCQLRCRQSGCPCCCCNGLSCCSPALFCCGELGVLLTPSARGDRTPRPSVGH GAPAGGCCVERGKGKGKEEQPVLLLLLAESSTELGKGWNKRCLAYRKDEDVRHPPRRV VQGGYGAYNAYITAATRYAALGTPTSYDHPGPAYGNRVAQRSHEILGQEVAVDTAEPL EGGSGGGYLEPAEAYGPYGAYGSLLPYGRFSGSLGYDYGYGPSGNSSRSRPESRYRPF GDIAMASYGVT</aaseq>

Gene Sequence

<dnaseqindica>2594..2633#2084..2142#1708..1845#1542..1582#1056..1194#1..621#atggcgccggtcaggggagaaagagccgcgctgcctgcgagggccgcgtgcgggctccgggctgccgccggcacgcccgcgcccatctgggttcccgttggcgggcgcgcggtcccttgggccgccgccgccgccgtggaggtgggctgctgcccaccgctctgcccgctcccgtgcccttcctcttgccagctcctcaagctccctgtcggcgatgatgtcgccggcgatggagccgttgatgctgctgcgcaaggtctcaacctctacctccgccgcacgtgccgcatcttccgccgcctccgcctccgcctccgccctggctgctgccaactccgctgccgccagtctggctgcccttgctgctgctgcaacggtctaagctgttgctcacctgcgctcttctgctgcggcgagctcggcgtcctgctgacgccgagtgctcgaggcgaccgaacgccgagaccgagcgtcggacatggcgcacctgcggggggctgctgcgtggagagggggaagggaaaggggaaggaggagcaaccggtgctgctgctgctgctggctgagagctcaaccgagcttgggaaggggtggaacaagagatgtttagcctacaggaaagtgttgctctgataccagatgttagaatctcaatggttactctcattgagaagaggatggcactcgagatgggggcaattttctggttttcttcattcacaaaaacacaaaagccataccttcccgagggaggttggatacatatatatagccatagctggctggatggctgctagctaattgctgcccacactagtctaaaatttgaacgcaatgctgtcctagagagcatccaaactgaataaagcataaaggagatgctaatgctgtcctagggatgctaaaagcaaaaccgaaagatgctaaaagcaaaactgaaaggatgctgtcctaaaaggggaaaaacaacctaaaagcaagagaaggaccacaaggaccaaagaccacaaggcttattccatcatttatgataatgcattttttcctactaacaggatgaagatgttaggcaccccccaaggagagttgttcagggtggttatggtgcatacaatgcatacataacagctgctaccagatatgcagctttgggtacaccaacatcgtatgatcatccaggaccagcttatggaagtaagttatacttataagttgtctgatattggacagaggaaggaatttgttagtgactggatatcgtgtcttaattggctaggaggacacttaggtgggtcgcttggaacaggcaaaaagatttttgttggtaggcttccacaagaagcaaatactgatgatttatgggattattttggccgatttggttgaattgtggatgcgtacattccaaaggtttggctgtgtccattattggttatgttcttagtttttcgtcatctcactttcttaagcactataggatcctaaaagaagtggccatggaggttttggttttgttacttttgctgatgatggtgtggcagatcgtgttgcacagagaagtcatgaaattcttggacaggaggtgagacaaaatagcggcgggctcagcacaatctgtgtagacgtgcatgtgtgctaaaaaaattaacctgtgaaaattataatattgattttctcatttttcatgtggtacgatttcccccacaggttgctgtggacacagctgagccacttgagggtggttcaggtggaggttacttggaacctgcagaggcatatggaccatatggagcttatggctcattactgccttatggcagattctctggtagccttggttatgatgtaagtagccatcagcatcaaggctgattataagtgcattttacagaacaaaggcctgttcatctgatagacttacaactagctagctttgcatgtccttcctcctgccagttgttttcttgtatatgtaacactacttaggctttatattggtctctcttcgttgttgtcgtgattgccatcatcctttttatcaattgaattgtggcacattctaacaatttttctcatattgcagtatggttatggccccagtggaaatagtagcaggtcaagaccagaatctcgatacagaccgtactgaggttcttattgtaggcatggcaataccgtatatcttgagaacaatatacgtctgaaaccgggtaagcttttgggggatgaatattctgctgtcactcgccaggattgcatgcggtagacgccttatgtggtagccaaatttcgtgtagacgccttgcacttttgtgtcactggttatgccatctattaagggcagttgctcagtttcgcgtcatttttttttgttcggaaaagatgccagtctgttgattgagaacattttcagtgctctcgagtcttgacaaacatgtgcttcaggaaaattctgcaagtttgggttgctgcttgatatcacttctacactggaaaaataatcaggtatagagcatcccgaagtatcaaaaccaatgcaaatcgagttccactgcatttttgtcatacggagcgctcacatggctggattcagcttcggtgacattgctatggcaagttacggtgtgacatag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0376000, RefSeq:Os05g0376000