Os07g0107800

From RiceWiki
Revision as of 20:30, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0107800

Description

Similar to Phytosulfokine receptor precursor (EC 2.7.1.37) (Phytosulfokine LRR receptor kinase)

Version

NM_001065246.1 GI:115470224 GeneID:4342205

Length

3389 bp

Definition

Oryza sativa Japonica Group Os07g0107800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:423972..427360

Sequence Coding Region

424022..427129

Expression

GEO Profiles:Os07g0107800

Genome Context

<gbrowseImage1> name=NC_008400:423972..427360 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:423972..427360 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggtgccgccgccgccgccttcccttctccccctctccctacaccccgcctctgcccgtgaggccaagtccatggcgagacgcgcgcccctacgctgtctcttcctctccctcgtcgcgctcttcgctttgctgccattcccgcccgctgcggcggcgccatgccacccggaagacctcctcgcgctgcgggcatttgcggggaatctctctgcgggtgggggcggcgccggactccgcgccgcgtggtcgggtgacgcctgctgcgcctgggacggcgtcgcctgcgacgccgccgcccgagtcacggcgctgcgcctccccgggcgaggtctcgaggggcccatcccgccctccctcgccgccctcgcgcgcctccaggacctcgacctcagccacaacgcgctcaccggcggcatctccgccctcctcgccgccgtctccctccgcaccgccaacctctcctccaacctgctcaacgacacgctcctcgacctcgccgcgctgccgcacctgtccgcgttcaacgccagcaacaactcgctgtccggcgcgctcgcccccgacctctgcgccggcgcgccggcgctgcgggtgctcgacctctccgccaacctcctcgccgggacgctctcgccgtccccgtcgccgccgccctgcgccgccacgctccaggagctctacctcgcatccaattccttccatggcgccctaccgcccacgctcttcggcctcgccgcgctgcagaagctctccctcgcctccaatggcctcaccggccaggtcagcagccgcctccgcggcctcacaaacctcacctctctcgatttgtccgtgaaccgcttcaccggccacctccccgacgtgttcgccgacctcacgtcgctgcagcatctcaccgcgcactccaatggcttctccggcttgctgccgcgctcgctctcgtcgctctcatctctccgtgacctcaacctccggaacaactccttttccggcccaattgctcgtgtcaacttctcctccatgccgttcctcgtgtccattgaccttgccactaaccacttgaatggctctctcccgcttagcctcgccgattgcggcgacctcaagtcactcagcattgccaagaacagcctcaccggccaattgcccgaggagtacggccgcctcggctcgctctccgtgctctcgctgtccaacaacaccatgcgcaacatctcgggggcgctcaccgtgctccgcgcctgcaagaacctcaccacactgatcctcaccaagaatttcgtcggcgaggatctccccgacgacggcattgctggattcgacaatcttgaggtgttggcccttggtgattgtgctctcaggggaagggtcccggaatggctgcatcagtgcaagagactggaggtgcttgatttgtcctggaaccaattggttggcaccatccctgaatggatcggtcaacttgataacctgacctacttggatctttcaaacaattccttagtcggcgagataccgaagagtttgacgcagctcaagagccttgtcaccgcccgacgttcgccgggtatggcgttcactaacatgccgttgtatgtgaagcataacaagagcacaagtggccggcaatacaaccagctctcaaacttcccaccgtcgttgttcttgaatgataatggtctgaatgggactatctggcccgagtttgggaacttgaaagagctacatgtgctggatttgagcaacaatgccatatctgggagcattcctgatgtgctgtcccggatggagaatttggaggttcttgatctgtcatccaataatctcagtggatcgattccatcgtcgctgacggacctgaccttcttgtcaaagttcagtgtggctcacaatcacttggtggggccgatcccaaatggaggacagttcttcaccttctcaaactcaagttttgaaggtaaccctggtctgtgcaggtcaagttcttgtgaccagaatcagcctggggaaactcctaccgacaatgacatacagcggagcggcagaaacaggaaaaacaaaattcttggagtggccatctgcatcggtttggtacttgtagtactgttggctgttatcttggttaacatctcaaagagggaggtcagcattattgacgacgaagaaattaatggctcctgtcatgactcgtatgattactggaagccagtgctattctttcaggattctgccaaggagctaactgtcagcgatctcatcaagtcaacaaacaactttgatcaggccaacataataggatgtggcggttttggccttgtgtacaaggcctacctcccagatggaacaaaggcggcggtgaagaggctatctggagattgcgggcagatggagagggagttccgtgctgaggtggaagcgctgtcgcaggctcaacacaaaaatcttgtttcactgagagggtactgccgctatggaaatgataggctgctaatctactcatacatggagaacaatagcctggactactggctgcatgagagatcagatggaggctacatgctgaaatgggagtcaaggctcaaaattgcacagggttccgcaaggggactggcttatctgcacaaggactgtgagcccaacatcatccaccgagatgtgaagtccagcaacattcttctgaacgaaaatttcgaagcgcacctggctgattttgggctagcaagactgatacagccatatgacactcatgtcacaactgatctggttggtacattgggatacataccgccggagtacagccagtcggtgatcgccactccaaaaggggatgtctacagcttcggcgttgtcttgctggaacttctgacaggcagacggcccatggatgtgtccaaagccaagggatcaagggacttggtctcctatgttcttcagatgaagtccgaaaagaaggaagagcagatctttgacaccctgatatggagcaaaacacatgagaagcaactgttttcggtccttgaggcggcgtgtaggtgcatcagcactgaccctcggcagcgcccatcgatcgaacaagttgttgcttggcttgacagcgtataa</cdnaseq>

Protein Sequence

<aaseq>MVVPPPPPSLLPLSLHPASAREAKSMARRAPLRCLFLSLVALFA LLPFPPAAAAPCHPEDLLALRAFAGNLSAGGGGAGLRAAWSGDACCAWDGVACDAAAR VTALRLPGRGLEGPIPPSLAALARLQDLDLSHNALTGGISALLAAVSLRTANLSSNLL NDTLLDLAALPHLSAFNASNNSLSGALAPDLCAGAPALRVLDLSANLLAGTLSPSPSP PPCAATLQELYLASNSFHGALPPTLFGLAALQKLSLASNGLTGQVSSRLRGLTNLTSL DLSVNRFTGHLPDVFADLTSLQHLTAHSNGFSGLLPRSLSSLSSLRDLNLRNNSFSGP IARVNFSSMPFLVSIDLATNHLNGSLPLSLADCGDLKSLSIAKNSLTGQLPEEYGRLG SLSVLSLSNNTMRNISGALTVLRACKNLTTLILTKNFVGEDLPDDGIAGFDNLEVLAL GDCALRGRVPEWLHQCKRLEVLDLSWNQLVGTIPEWIGQLDNLTYLDLSNNSLVGEIP KSLTQLKSLVTARRSPGMAFTNMPLYVKHNKSTSGRQYNQLSNFPPSLFLNDNGLNGT IWPEFGNLKELHVLDLSNNAISGSIPDVLSRMENLEVLDLSSNNLSGSIPSSLTDLTF LSKFSVAHNHLVGPIPNGGQFFTFSNSSFEGNPGLCRSSSCDQNQPGETPTDNDIQRS GRNRKNKILGVAICIGLVLVVLLAVILVNISKREVSIIDDEEINGSCHDSYDYWKPVL FFQDSAKELTVSDLIKSTNNFDQANIIGCGGFGLVYKAYLPDGTKAAVKRLSGDCGQM EREFRAEVEALSQAQHKNLVSLRGYCRYGNDRLLIYSYMENNSLDYWLHERSDGGYML KWESRLKIAQGSARGLAYLHKDCEPNIIHRDVKSSNILLNENFEAHLADFGLARLIQP YDTHVTTDLVGTLGYIPPEYSQSVIATPKGDVYSFGVVLLELLTGRRPMDVSKAKGSR DLVSYVLQMKSEKKEEQIFDTLIWSKTHEKQLFSVLEAACRCISTDPRQRPSIEQVVA WLDSV</aaseq>

Gene Sequence

<dnaseqindica>51..3158#gcgcgcacacacgcagacaagaaagctggaccaaacgggccccgccagcaatggtggtgccgccgccgccgccttcccttctccccctctccctacaccccgcctctgcccgtgaggccaagtccatggcgagacgcgcgcccctacgctgtctcttcctctccctcgtcgcgctcttcgctttgctgccattcccgcccgctgcggcggcgccatgccacccggaagacctcctcgcgctgcgggcatttgcggggaatctctctgcgggtgggggcggcgccggactccgcgccgcgtggtcgggtgacgcctgctgcgcctgggacggcgtcgcctgcgacgccgccgcccgagtcacggcgctgcgcctccccgggcgaggtctcgaggggcccatcccgccctccctcgccgccctcgcgcgcctccaggacctcgacctcagccacaacgcgctcaccggcggcatctccgccctcctcgccgccgtctccctccgcaccgccaacctctcctccaacctgctcaacgacacgctcctcgacctcgccgcgctgccgcacctgtccgcgttcaacgccagcaacaactcgctgtccggcgcgctcgcccccgacctctgcgccggcgcgccggcgctgcgggtgctcgacctctccgccaacctcctcgccgggacgctctcgccgtccccgtcgccgccgccctgcgccgccacgctccaggagctctacctcgcatccaattccttccatggcgccctaccgcccacgctcttcggcctcgccgcgctgcagaagctctccctcgcctccaatggcctcaccggccaggtcagcagccgcctccgcggcctcacaaacctcacctctctcgatttgtccgtgaaccgcttcaccggccacctccccgacgtgttcgccgacctcacgtcgctgcagcatctcaccgcgcactccaatggcttctccggcttgctgccgcgctcgctctcgtcgctctcatctctccgtgacctcaacctccggaacaactccttttccggcccaattgctcgtgtcaacttctcctccatgccgttcctcgtgtccattgaccttgccactaaccacttgaatggctctctcccgcttagcctcgccgattgcggcgacctcaagtcactcagcattgccaagaacagcctcaccggccaattgcccgaggagtacggccgcctcggctcgctctccgtgctctcgctgtccaacaacaccatgcgcaacatctcgggggcgctcaccgtgctccgcgcctgcaagaacctcaccacactgatcctcaccaagaatttcgtcggcgaggatctccccgacgacggcattgctggattcgacaatcttgaggtgttggcccttggtgattgtgctctcaggggaagggtcccggaatggctgcatcagtgcaagagactggaggtgcttgatttgtcctggaaccaattggttggcaccatccctgaatggatcggtcaacttgataacctgacctacttggatctttcaaacaattccttagtcggcgagataccgaagagtttgacgcagctcaagagccttgtcaccgcccgacgttcgccgggtatggcgttcactaacatgccgttgtatgtgaagcataacaagagcacaagtggccggcaatacaaccagctctcaaacttcccaccgtcgttgttcttgaatgataatggtctgaatgggactatctggcccgagtttgggaacttgaaagagctacatgtgctggatttgagcaacaatgccatatctgggagcattcctgatgtgctgtcccggatggagaatttggaggttcttgatctgtcatccaataatctcagtggatcgattccatcgtcgctgacggacctgaccttcttgtcaaagttcagtgtggctcacaatcacttggtggggccgatcccaaatggaggacagttcttcaccttctcaaactcaagttttgaaggtaaccctggtctgtgcaggtcaagttcttgtgaccagaatcagcctggggaaactcctaccgacaatgacatacagcggagcggcagaaacaggaaaaacaaaattcttggagtggccatctgcatcggtttggtacttgtagtactgttggctgttatcttggttaacatctcaaagagggaggtcagcattattgacgacgaagaaattaatggctcctgtcatgactcgtatgattactggaagccagtgctattctttcaggattctgccaaggagctaactgtcagcgatctcatcaagtcaacaaacaactttgatcaggccaacataataggatgtggcggttttggccttgtgtacaaggcctacctcccagatggaacaaaggcggcggtgaagaggctatctggagattgcgggcagatggagagggagttccgtgctgaggtggaagcgctgtcgcaggctcaacacaaaaatcttgtttcactgagagggtactgccgctatggaaatgataggctgctaatctactcatacatggagaacaatagcctggactactggctgcatgagagatcagatggaggctacatgctgaaatgggagtcaaggctcaaaattgcacagggttccgcaaggggactggcttatctgcacaaggactgtgagcccaacatcatccaccgagatgtgaagtccagcaacattcttctgaacgaaaatttcgaagcgcacctggctgattttgggctagcaagactgatacagccatatgacactcatgtcacaactgatctggttggtacattgggatacataccgccggagtacagccagtcggtgatcgccactccaaaaggggatgtctacagcttcggcgttgtcttgctggaacttctgacaggcagacggcccatggatgtgtccaaagccaagggatcaagggacttggtctcctatgttcttcagatgaagtccgaaaagaaggaagagcagatctttgacaccctgatatggagcaaaacacatgagaagcaactgttttcggtccttgaggcggcgtgtaggtgcatcagcactgaccctcggcagcgcccatcgatcgaacaagttgttgcttggcttgacagcgtataatcattaataattctgtgtttttaagttgtctgctgttcattttggattgcaggctaggcctgacatgagaagtagacagagggtataggagcaatctgagtgctaataatctttagaagatgcagtctatgtgatgtacatagcttagtgtcgttttgttatattatatccaggaatagacctgtatctttgttttgttgtctgaaacttggccttccagcaaaataccaa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0107800, RefSeq:Os07g0107800