Os05g0376300

From RiceWiki
Revision as of 10:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0376300| Description = Conserved hypothetical protein| Version = NM_001061916.1 GI:115463562 GeneID:4338615| Length = 3635 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0376300

Description

Conserved hypothetical protein

Version

NM_001061916.1 GI:115463562 GeneID:4338615

Length

3635 bp

Definition

Oryza sativa Japonica Group Os05g0376300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18168155..18171789

Sequence Coding Region

18168346..18168481,18168895..18169247,18169333..18169407,18169646..18169738,18169835..18170078
,18170332..18170411

Expression

GEO Profiles:Os05g0376300

Genome Context

<gbrowseImage1> name=NC_008398:18168155..18171789 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:18168155..18171789 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgagaggcgagaaggggatgcagcccaagatcagtgcgttcttcaagcgtcaggcccccgagcccgagacgagcagtggcggtgacacgcatagggaaggaacctgcgggacggaggtgaagaggcccaagagctgtgcggatggcaaggtcctcaacaagaagaggaactacgcgcagttccacctggagcttgggcagcccgattttctcctccacatgtgctcggtttgtggcatgatgtatgcccgcgggaacgacgacgatgagaaggctcacaaggcataccacaagagttacttcgagggtgtcccgttcaagggttggcgcaatgaaaccgtggtcgcgaggtctgaaggtggggatcggataattcttgtgactgatgaaaattcatgtgctcggaacagcaaggtccaggaggtgatcaaagtggtacagaaggagctggggtttggtgaaggtcagctccttcacaagctttgtaaggtatatttgttcatatctagtcagaggatagtgggatgccttgttgtggaaccaatcaaaacagcacataaagtgattccaggctccacagaggaaaacggcagtgatctgcctgttgataaaattgaaccagtcaaaacaaaccatacattagcgttcgggaaaatcagttttaagagggaagtcctgaaacggcatgatcattcagacaagaacaaagaagagtaccgagatcctggtgctataatatgtgaaaaggaagatgttcctgcacattgtggatttcgagcaatttgggttgtaccgtcacgcagaagaaagcgaatagggtcacaactgatggatgctgctagaaaaagcttccttgaaggcgagactttgtgcatctcacagtgcgctttctcaccgcctacttcctccgggaaggcgctggcacgcagctattgcaagaccagcgcattcttagtctacaaggagcaagatgcatag</cdnaseq>

Protein Sequence

<aaseq>MTRGEKGMQPKISAFFKRQAPEPETSSGGDTHREGTCGTEVKRP KSCADGKVLNKKRNYAQFHLELGQPDFLLHMCSVCGMMYARGNDDDEKAHKAYHKSYF EGVPFKGWRNETVVARSEGGDRIILVTDENSCARNSKVQEVIKVVQKELGFGEGQLLH KLCKVYLFISSQRIVGCLVVEPIKTAHKVIPGSTEENGSDLPVDKIEPVKTNHTLAFG KISFKREVLKRHDHSDKNKEEYRDPGAIICEKEDVPAHCGFRAIWVVPSRRRKRIGSQ LMDAARKSFLEGETLCISQCAFSPPTSSGKALARSYCKTSAFLVYKEQDA</aaseq>

Gene Sequence

<dnaseqindica>3309..3444#2543..2895#2383..2457#2052..2144#1712..1955#1379..1458#tgctccagttcctgtcgggagagagatggggaaaagggatgggtagatagatattaggtaaagggactcggtagagagagttggctgctaacatataagacccatgtgggtctcacgctgactcaaccagattgataatagtcaactcgtcacattagttaaaactggatgttatactatcatgtgacctcggttacaccgattttgcaaattggttgaaggacacaatctaaactcatagtcaataagagagacctaaagtgaacttattataatgaatattgactattgagttggcccagcagcccaccatgttcataagaataaggtccatgacaactgctgctcacctactctccgcctctcccagtctcctgttcgttcctctctcccaagtctagggatgaaagtggttggaaatggtcggaaacggcatcattattttattattttttaaaaaacaagcagaaacggtcgaaaaattttcatattcatgaattcatctatttagtgtcaacttcaatgccacgccgatagaaattaaaaaaactaaattttaaaaacgataaccatcgataaaaatattattattatattagtttttcggaaacggtatcggtacggtcggaaaatttccataccgttttcacccccagccaagtcccaacaacgttccgaggtcacagcgctcgtccgggcgtccatcgctgccaatttcaggcccgttgttttggcgcccgaatccccctcccgcatttttccccttcagaaaaccccgcgcgcgcggccttctcgattcctgcccgtccgatccgccctcacagcctcaccgcctcatctccgccgtcaattggccctaaccccaccgaccacccgcggccctcgtcttcctcctcgccgcgccccctttcacaacggagccgggcgctgtccccccctccgcgctgcaccgcaaaccagccgccgcctcccgtcaagaccgtccttcgccgctgcagccgtgagggcatccctccccctccccgccgagcgagctacaccggcctctttccccccctgccccgtgctggacggtgagtggcattcttcttccccctttaaaagttttctaaggttgatgtgtatatctcgcttaggtctggggatttttgggtatgatacttcttgattttgttaggctactcatatagcatatggtagttcagatttggatgtgtcttgcacatatgttgggttctgcacactggttaattctgtagtttagctattttcacatagaggttgcacatatgcatgctaataatttgctggcaaatttgcataattcaccgcagccaccgccgcgtccgtttcttcactctccgtctttccaagcagcatgacgagaggcgagaaggggatgcagcccaagatcagtgcgttcttcaagcgtcaggcccccgagcccgagacgagcaggttcttcatcttggtcccctcttcaaatctgttagctgtagcgatccggtaccaaatattgccggattccattctagtagcaaatttctgcaatattccatcaattagagcgaatattaaaatcgctcgtcaggttggaaaaaaatggttgttgatttagttctcgttaattcccaagcatgctgtccgacattggcatgttcctggattcagatttgataatggactgatcaatctttgttgatttggtaagtggcggtgacacgcatagggaaggaacctgcgggacggaggtgaagaggcccaagagctgtgcggatggcaaggtcctcaacaagaagaggaactacgcgcagttccacctggagcttgggcagcccgattttctcctccacatgtgctcggtttgtggcatgatgtatgcccgcgggaacgacgacgatgagaaggctcacaaggcataccacaagagttacttcgagggtgtcccgttcaaggtgttgcacctgatgtatatttgtgaatctcactcttctgttcatctcgtgttataaatttctgtgaagagtttatgacaaatgtttgagttgcagggttggcgcaatgaaaccgtggtcgcgaggtctgaaggtggggatcggataattcttgtgactgatgaaaattcatgtgctcggaacagcaaggtattttgcctgaatgactaactgtattgcctagatagttgaaagaaatcactagttggggtcttggggaaatgaatattgaaaagagtgggttcctcatagttctaaactgtagaatgtgtgtctttactaactgcgaagtttctgatccaattttgcaaccactttacatttacgagaagttcagaagcagattgcagacattttatgattatgtaatgtcatgtgaatatttcaggtccaggaggtgatcaaagtggtacagaaggagctggggtttggtgaaggtcagctccttcacaagctttgtaaggtaacatcagctcttagttcaaatatgacaacatctatgcacatatattcatcctaatgggtaaaacctcatttgcgttgcataggtatatttgttcatatctagtcagaggatagtgggatgccttgttgtggaaccaatcaaaacagcacataaagtgattccaggctccacagaggaaaacggcagtgatctgcctgttgataaaattgaaccagtcaaaacaaaccatacattagcgttcgggaaaatcagttttaagagggaagtcctgaaacggcatgatcattcagacaagaacaaagaagagtaccgagatcctggtgctataatatgtgaaaaggaagatgttcctgcacattgtggatttcgagcaatttgggttgtaccgtcacgcagaagaaagcgaatagggtcacaactgatggatgctgctaggtaagttctaagtttgatgcgcattctcacctactttgcttcacttagcatctttctttttcgcagcattcctgcaatgcccgtcttgaactcttgatagcatacattgttctttttggggggaatacgcaaaaggcttgcgcatcattgcactaagagaaggatagcatgcattgttctctgtaacaacaatgtatagatccatcatagcatgcattgtcaatttggacaaattccaagcttttgaccagattataggactaataaaactatttgttaactgacatcacactgcaaatatcactgaattatttatctgtctgtccagttgttctcttctatgctctgcaagcatttccaagagtttgatattatcttatcttgctaaggcactctccattcgtcttctgcagaaaaagcttccttgaaggcgagactttgtgcatctcacagtgcgctttctcaccgcctacttcctccgggaaggcgctggcacgcagctattgcaagaccagcgcattcttagtctacaaggagcaagatgcataggagatgctgcagaagatgttacatatctgaaacttctcttcccattgtaaaaattgttttgctggggatatatgtgaaacataaacaggcatgttctgtttttagtgtaagtctaagcaccagaagcagtgcgtttttgcaggatctctatgtattgacactttggatttcctgatcagcagcattttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0376300, RefSeq:Os05g0376300