Os07g0108400

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os07g0108400

Description

C2 calcium/lipid-binding region, CaLB domain containing protein

Version

NM_001065252.1 GI:115470236 GeneID:4342211

Length

1915 bp

Definition

Oryza sativa Japonica Group Os07g0108400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:450796..452710

Sequence Coding Region

451093..451377,451501..451596,451714..451824

Expression

GEO Profiles:Os07g0108400

Genome Context

<gbrowseImage1> name=NC_008400:450796..452710 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:450796..452710 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacggattggtaggcctcttgaaaatacgggtggtgcgtgggattaaccttgcctaccgcgacacaagaggcagtgatccatatgtcgtccttcgcctcggcaagcaaaaagtgaagactagtgtaaagaagaaatctgtgaatcctatttggcatgaagagctaactttgtcgatcatgaaccctattgcaccgattaagcttggggtgtttgacaaagacactttcagtagagacgacccaatgggagatgcagaaatagacctggagcccttcatggaagttctgaacatggacccggagaacattcggaatggttccatcataaaaacaattcgaccatccaaccagaactgccttgctgatgagagtcacctattctggaggaatggtaaatttgtccaggacattattctccgacttagaaacgtcgagagtggtgagctgcaagtgcaactgcaatgggtgaaaattcctggcaggcactaa</cdnaseq>

Protein Sequence

<aaseq>MDGLVGLLKIRVVRGINLAYRDTRGSDPYVVLRLGKQKVKTSVK KKSVNPIWHEELTLSIMNPIAPIKLGVFDKDTFSRDDPMGDAEIDLEPFMEVLNMDPE NIRNGSIIKTIRPSNQNCLADESHLFWRNGKFVQDIILRLRNVESGELQVQLQWVKIP GRH</aaseq>

Gene Sequence

<dnaseqindica>1334..1618#1115..1210#887..997#tacacttgctgctttaatttatttaccttacattttgctactcacataaactttgttccagaaacattgtttgaaaatatggtgatttttttaactattgttgataaaaacttggtgctgttatggacctggcctgatctgtggtggcgaatgagtgaggggatggcatcactctatatatgcgaaaagccgaaaacagccatgtgttctgctctttgttcctttttgtttaagttttgttgctgggataacactttgtagcctgcctctcatgaatcatgatggaaatggaaggggtctccctcttctggctataatacatttgcttctcaaatattacagtacatttctaaaggaaagaaaaaaaaagatatggtaaattgaaacttccatgcctttttccatatctatttataggttttgcacgtgttgtccaaatgtgatcctttatagaggtcacacctttatccaggtttcttatccgagctaatcgaaatccaagaacaaaaatactactgtggcaaaaaagaataaggaagaacataaggaactcccacatgtccaaaaatggaagcaattagtttggtttcaatacaggccacaaaagaaatggtcagctcaactcctacggttgaggctcacacctcattcaccctgtcctgagcaatcctttttaggctccttcctgcaaggctgcaactatataggccgatgaggacagaagggggaaaaaacacaggcgcattctaccgagaggcacaggggttgcaagaagtcgcctaattctcctattgaattaggcacatcttcgcccccacattgcctctcattgtaaaatagtatcaactgataatccacaggaactaaacaacaattaaatccaattatggacggattggtaggcctcttgaaaatacgggtggtgcgtgggattaaccttgcctaccgcgacacaagaggcagtgatccatatgtcgtccttcgcctcggcaagcaagtatgattacttttttgtttttatatctctagcgatttgcctcatctccatctcttttgtttgagtatatattgttctcagtgtcttaccgagttttgtgttttgatcatattacagaaagtgaagactagtgtaaagaagaaatctgtgaatcctatttggcatgaagagctaactttgtcgatcatgaaccctattgcaccgattaagcttgtgagtggatgttgttttcttacaagcatgtgtactaactgattatgatatttcatgttcaaccctgtttttttttaatgaatgctcacattgcggattttcttcttctgttgaaataaacagggggtgtttgacaaagacactttcagtagagacgacccaatgggagatgcagaaatagacctggagcccttcatggaagttctgaacatggacccggagaacattcggaatggttccatcataaaaacaattcgaccatccaaccagaactgccttgctgatgagagtcacctattctggaggaatggtaaatttgtccaggacattattctccgacttagaaacgtcgagagtggtgagctgcaagtgcaactgcaatgggtgaaaattcctggcaggcactaagtgtctcatggccattgggagatcttggctactgagatatcattgacatttccgaatgccaaaacatatattgtgcgaaatggatcatgtcaaccattggggctgtaaatactgtgcaaaaaatgaatcatgtcaagcacgttttgatgtggaggttgtgaccagcaaagggttcatcaggttagtcaatgtctgtaggaaaggaaaatgatgttaaaatgttgttgccgaaatgtattgggagcatgatcagtaaagcttgggatgacataatcaaatagtacaaacgataggacc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0108400, RefSeq:Os07g0108400