Os07g0127500

From RiceWiki
Revision as of 20:30, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0127500

Description

Similar to PR-1a pathogenesis related protein (Hv-1a) precursor

Version

NM_001065346.1 GI:115470424 GeneID:4342313

Length

721 bp

Definition

Oryza sativa Japonica Group Os07g0127500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1464835..1465555

Sequence Coding Region

1464905..1465423

Expression

GEO Profiles:Os07g0127500

Genome Context

<gbrowseImage1> name=NC_008400:1464835..1465555 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1464835..1465555 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcggaaagtaggctttgtcctggtgctactggcggcggcgacgctcgccatggaggccggaacggcggcggcgcagagctcgccgcaggacttcctcgacgcccacaacgccgcccggcgcggcgagggcgtggacctccccgacgtggcgtggaacgcgaccctggaggcgttcgcggagagcgtggtggcgagcgccgccgccggcggcgcgtgcgatctccggcacacgtcgggcagcggctacggcgagaacctctactggggccccgccgggaaggcgtggtcggcggcggacgcggttggcttgtggatggaggagaaggcgtcctacgtgtacagcagcaacacctgcaccaaaggggcgctgctcgactgcggccactacacgcagatcgtgtggcggagcacgacgtcgatcggctgcggccgcgccgtctgcaacaacggcgatgtcctcatcagctgcaactatttcccgcccggcaacgtccccaacgagcgcccgtactag</cdnaseq>

Protein Sequence

<aaseq>MARKVGFVLVLLAAATLAMEAGTAAAQSSPQDFLDAHNAARRGE GVDLPDVAWNATLEAFAESVVASAAAGGACDLRHTSGSGYGENLYWGPAGKAWSAADA VGLWMEEKASYVYSSNTCTKGALLDCGHYTQIVWRSTTSIGCGRAVCNNGDVLISCNY FPPGNVPNERPY</aaseq>

Gene Sequence

<dnaseqindica>71..589#gatcagctagcacagcacaatcgctttagctaccttgagaaactcttctgcattggatcgatctgcaataatggcgcggaaagtaggctttgtcctggtgctactggcggcggcgacgctcgccatggaggccggaacggcggcggcgcagagctcgccgcaggacttcctcgacgcccacaacgccgcccggcgcggcgagggcgtggacctccccgacgtggcgtggaacgcgaccctggaggcgttcgcggagagcgtggtggcgagcgccgccgccggcggcgcgtgcgatctccggcacacgtcgggcagcggctacggcgagaacctctactggggccccgccgggaaggcgtggtcggcggcggacgcggttggcttgtggatggaggagaaggcgtcctacgtgtacagcagcaacacctgcaccaaaggggcgctgctcgactgcggccactacacgcagatcgtgtggcggagcacgacgtcgatcggctgcggccgcgccgtctgcaacaacggcgatgtcctcatcagctgcaactatttcccgcccggcaacgtccccaacgagcgcccgtactagctagtagaattaatactggagtagatgcatgtacgttaggcgcgcatcagatatctatatgtaaaacatacagaatacagtacgttattcgtacttaaggagtacatgataaataaaggatttgttatgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0127500, RefSeq:Os07g0127500