Os09g0542200

From RiceWiki
Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0542200| Description = Thioredoxin fold domain containing protein| Version = NM_001070355.1 GI:115480452 GeneID:4347738| Length = 2626 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0542200

Description

Thioredoxin fold domain containing protein

Version

NM_001070355.1 GI:115480452 GeneID:4347738

Length

2626 bp

Definition

Oryza sativa Japonica Group Os09g0542200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22186863..22189488

Sequence Coding Region

22186951..22187112,22187233..22187391,22187643..22187745,22189088..22189377

Expression

GEO Profiles:Os09g0542200

Genome Context

<gbrowseImage1> name=NC_008402:22186863..22189488 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22186863..22189488 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggccgagggcgccgctgctgcggcggatgctgctgctgtgcgcggtggcggcctcctgctcctactacctcctcgtcctccacgcgcaggcctccgtgccgccgcgctacgacgggttcgcctacggggacgccgccaccgccgcctggaaggacaccatcctcgtcgaggccttcctcgacccgctctgccccgacagccgcgacgcctgggcgcccctcaggctcgccgtcgaccgctacgcccccagggtctccctcatcgtccaccccttccccctcccgtaccacaccaattcattccttgcctgccgtgcactttacatagctaacaaattgaactcatcatcgacctatcctttgctggagctgttcttcaagagccagggtaagttctacaatgctgcaacatcctcactatcgagcactgttataagtggcgagatgtcaaagctggcagcacgggttgtcggtaattcggtgtctgagttccagtcaggcttcagcgatataaggactgacctagcagcgagggtttccttcaagtatgggtgcacgagaggagtagccggtgcaccgttcttctttgtgaacggattccttcagcctggtggtggatcgcctattgactacagcacatgggtcagcatcctggatcccctcgctgggcagcatggcgatagattagagatgttcacctctatgtaa</cdnaseq>

Protein Sequence

<aaseq>MARPRAPLLRRMLLLCAVAASCSYYLLVLHAQASVPPRYDGFAY GDAATAAWKDTILVEAFLDPLCPDSRDAWAPLRLAVDRYAPRVSLIVHPFPLPYHTNS FLACRALYIANKLNSSSTYPLLELFFKSQGKFYNAATSSLSSTVISGEMSKLAARVVG NSVSEFQSGFSDIRTDLAARVSFKYGCTRGVAGAPFFFVNGFLQPGGGSPIDYSTWVS ILDPLAGQHGDRLEMFTSM</aaseq>

Gene Sequence

<dnaseqindica>2377..2538#2098..2256#1744..1846#112..401#tcgtcttcctcctccgtctccccacttgcgggagagaagagaaggttcagagtagcacacgctgcaccgcgcgcagcctcgagctcgaggagagggagatttggccccccgatggcgaggccgagggcgccgctgctgcggcggatgctgctgctgtgcgcggtggcggcctcctgctcctactacctcctcgtcctccacgcgcaggcctccgtgccgccgcgctacgacgggttcgcctacggggacgccgccaccgccgcctggaaggacaccatcctcgtcgaggccttcctcgacccgctctgccccgacagccgcgacgcctgggcgcccctcaggctcgccgtcgaccgctacgcccccagggtctccctcatcgtccaccccttccccctcccgtaagagttccttgctctctctctaccgtatttgtagaattgtgatgctctattcccagtattcgttgccgcaaaggggaaatttctcctttttttttctttttctttttttttacttttctatctatatgaaacgggaactggaagtattatagtatgtgtgacctcacagttttttagataggatagcaaattgatcctgagatagataaactggtgtaatttttgcgggtctggtagtctgtcttgcttgcactgactaatttggatagcaaaattgccctaatttaactgacaatcctcatatgtaggtgttatggataaaggttgtttaaacaagaaatcctctaccatttttgttatgagaaaagaaaccgtgatagagttaactgcagaagataagaaaatggccggagcaacattgacatatgtggtgccatcccatcaggccaccacaatgcaatgagcccaaacaacgactaaaatgtaaaaccctaggaaagccaaacacgagttcatggcatagtcactgctgtggaattagccaatagggttgtgaatgttcagattcattgcagctttatgtccatagaagatgtgaaattgggaattacctgatagcaagctagtttccatctcatcatagttagttttttgatatactccctccatatttttttgtttgacgttggttagctcaaaatagaactaaccaacgtcatacatttgtgcatggaggtagtaggtctgtacaattacaacggttgtttttatgttggtttctgcccttctgtttttggttgaaattctgtcctgctttgtactgtgtttgatcatacactgttcattgcttggcacggttcatagcaaagggttgtgctgggttatttccttttaaccggttatctttggatcaaacacctggacagcggttgacgtttctggtttatctgaggaatctttggtatcaggtagattaaatttcgttcaaatattaaggattccaatcctgatcctgccatccaaacagacctgtaatggcagcttgtgatacagaacaatttatttgttaatcaaacttgctatgcagaaccttgtttttgtaggatcaaccgttcaagtgaatgaatcaaatacagaccaatctgatgctatctattaaatccaagaacttcatttccttgatattaaagtgttaagtgtcttcaatttagacagcagatggttgggtattgcttcatgtgctgggttgaggtcattgtttttattgagtttgcccttttctattgttatactaaaaaagcaacaaattattcttacactttctactgtaaaattgcaggtaccacaccaattcattccttgcctgccgtgcactttacatagctaacaaattgaactcatcatcgacctatcctttgctggagctgttcttcaagagccaggtccttcacatttttctttactattctgtataattgtttgtgaatgctagttaggaagccatgtacaaggataaatctttcttgctttcagaatttcagtatcctcataaatcacaaaatggcatttgactcttgaatttgatagctttttttttgtcatacaattcatgcactgcagctccttttcttagtgctttacatggtagtttttctaatatagttgaattacaatactggatgaacacaagcagggtaagttctacaatgctgcaacatcctcactatcgagcactgttataagtggcgagatgtcaaagctggcagcacgggttgtcggtaattcggtgtctgagttccagtcaggcttcagcgatataaggactgacctagcagcgagggtttccttcaaggtcagctttactactgattgcatcaagtacattgtttgaattcttaagcagtttctcttgacttttttatcgttcttattgatggaaatgcctctgaattatggctttgtcctgttctagtatgggtgcacgagaggagtagccggtgcaccgttcttctttgtgaacggattccttcagcctggtggtggatcgcctattgactacagcacatgggtcagcatcctggatcccctcgctgggcagcatggcgatagattagagatgttcacctctatgtaagtatttgaagcgtgttgtaaacttgtaataatgattttgggaatactaacagttcgtctatttgatgcaataaatattgatcttaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0542200, RefSeq:Os09g0542200