Os05g0382000

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Revision as of 10:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0382000| Description = Similar to ABL164Cp| Version = NM_001061938.1 GI:115463606 GeneID:4338640| Length = 3669 bp| Definition = Oryza sat...")
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Gene Name

Os05g0382000

Description

Similar to ABL164Cp

Version

NM_001061938.1 GI:115463606 GeneID:4338640

Length

3669 bp

Definition

Oryza sativa Japonica Group Os05g0382000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18473793..18477461

Sequence Coding Region

18474027..18474127,18474247..18474302,18474851..18474950,18475060..18475135,18475440..18475603
,18475744..18475930,18476023..18476145,18476232..18476327,18476893..18477177

Expression

GEO Profiles:Os05g0382000

Genome Context

<gbrowseImage1> name=NC_008398:18473793..18477461 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:18473793..18477461 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatcgccaggacgtgaggacgaaggaggccgaggaggagaggatggaggagaacaatctcctgcattttctagatagcccaaacgcgcattacagaaggaaatgtgaagaatacgtatccgcgcatgatgatgaagcccattgcgatgcatcagatgtagatctggccaatgcaagggaaagattggagcatctgttgaaacaacctgccaacaagttctgtgcagactgtggtacccctgatccaaaatgggcggccttgccttttggtgcgttgatttgcataaagtgctctggaactcatagaagtcttggagtacacatatcaaaggtaatttccgtgaatctagacgaatggacagatgaagaggtcaattgtttagctggttcaggtggaaatgctacggtgaacacaagatatgaggcctttttgccagagaactttaaaaagcccagacatgattgcacaacagaggagcgttgcaatttcattaggaaaaagtacgagtttcaacagtttgtgactgatccacagttttcatgccctttacgattgaataccaaacacgcaccagacaagaatcagcagcagcaaaactgcagtgcgcgacatggttttggccatgcttttaggaatagctggaagagaaaggacacagataacaaaggactaaagaaaatgacggatgtgggtatggtggaatttgttggattaattaaggttgatattagacggggcacaaatcttgctgttcgtgatgtgatgtcaagtgatccatatgttatgcttaacctaggacaccaaaccatgaaaacgaaggtgataaagaacaccctgaatcctgtatggaatgaaagactaatgctatcgatccctcacccggtgccgcctcttaaattgcaagtgttcgacaaggacacgttcagctccgacgaccggatgggcgatgtggaggtggacatccagccgctgatcgccgcggcgcgagaacacgagagctcggccgccatcgccggctcggtggaggtcacgaagctgctggcgagcgacgacggcacgctggccagggacagcgtcatctccgtcgtcgacggcaaggtgaagcaggacatcgcgctgaggctccagaacgtggagcacggggagctggagatcgagctcgagtgcgtgccgctcagccagtag</cdnaseq>

Protein Sequence

<aaseq>MHRQDVRTKEAEEERMEENNLLHFLDSPNAHYRRKCEEYVSAHD DEAHCDASDVDLANARERLEHLLKQPANKFCADCGTPDPKWAALPFGALICIKCSGTH RSLGVHISKVISVNLDEWTDEEVNCLAGSGGNATVNTRYEAFLPENFKKPRHDCTTEE RCNFIRKKYEFQQFVTDPQFSCPLRLNTKHAPDKNQQQQNCSARHGFGHAFRNSWKRK DTDNKGLKKMTDVGMVEFVGLIKVDIRRGTNLAVRDVMSSDPYVMLNLGHQTMKTKVI KNTLNPVWNERLMLSIPHPVPPLKLQVFDKDTFSSDDRMGDVEVDIQPLIAAAREHES SAAIAGSVEVTKLLASDDGTLARDSVISVVDGKVKQDIALRLQNVEHGELEIELECVP LSQ</aaseq>

Gene Sequence

<dnaseqindica>235..335#455..510#1059..1158#1268..1343#1648..1811#1952..2138#2231..2353#2440..2535#3101..3385#aatagcaacgaattcaaccaaccaaccaaccaacccttctgctgcttcaatcgatcggcaacaaatctttctgggtggtctggtgctcaactcccccatcgccattttatgcccgaacctgtttctccagccaatttgatgaggattaatttccaaacgggctccgatcgatctccatgattaaccatccggcgtggtgatgagccgccgccgccgcatcgtcgtcgtctcccgatgcatcgccaggacgtgaggacgaaggaggccgaggaggagaggatggaggagaacaatctcctgcattttctagatagcccaaacgcgcattacagaaggtgccgcattttatcagtatatctgtcgggtttccttgcgaatttctctccgttttttgttcatgcaagattcagtaagaactttttttttctctcttcctctttttttttttataaaggaaatgtgaagaatacgtatccgcgcatgatgatgaagcccattgcgatgcatcaggtttttccccttgctccttcctttcctcttcacgttcatcgtggttaaactcattggggatctttgaaacgaatagattatagatctacgaaaagcttcacatgtatactgaatatcgcacaatgtcgaattttgttggaggagatttccatgatttttaactcttgttattaacattgtgcgaaactagctcaaacgggttaaatggctctcaaattggcattgcatggatggttcttccttggagctgcaatggctcacatttgcatggttaccaaatgccaagtgccaatccaccgaaaaatggggcttgcagagcccaaattgtgatctgcaaattcaattccccatgccatcttattctttatttgtgttcatgaccatcgtttctccaagaaatttgtctaatggtgttcaatgtcgatcatcgttgaaaattaggcggatctatatatgagcataatcttctgtgtttgtttgtctttaatgattcgcgtgtttccgacaatagctgcaacctgcatacaataacatgcaactcttaacagatgtagatctggccaatgcaagggaaagattggagcatctgttgaaacaacctgccaacaagttctgtgcagactgtggtacccctgatccaaaatgggcgtaagtatcagccgtttcccagacatacaacattatccctatatttttgtttttttttataaaattaatgctccttttgttatcctaatagctgatgtggttcttgcagggccttgccttttggtgcgttgatttgcataaagtgctctggaactcatagaagtcttggagtacacatatcaaaggtgcacacgattgactctttgtagttcactttgttctcccatctgctcatctcaaatttggtttcaactcgacttattctgattcaatggttgagatgttctaagagaccaaaggttgtcacgatatgaatctatttgtctctacagtaccaataaatttacactgcaggcaaacatttcgttactcaaaagcatggacatatatgatctagtttgtaaggcataagcatatggtaactgcaaactaatagacctcatactgaagtaataattattcaacaattcactgttcaattgagcacaggtaatttccgtgaatctagacgaatggacagatgaagaggtcaattgtttagctggttcaggtggaaatgctacggtgaacacaagatatgaggcctttttgccagagaactttaaaaagcccagacatgattgcacaacagaggagcgttgcaatttcattaggtataaattacgagtaagctagtatttttgtcgttactacttctgtagattctgctacggaaagtaggattctgatcgttactccttctgtaaattctgtttgacaaaactatgctttctctccatctacgtatatgcaggaaaaagtacgagtttcaacagtttgtgactgatccacagttttcatgccctttacgattgaataccaaacacgcaccagacaagaatcagcagcagcaaaactgcagtgcgcgacatggttttggccatgcttttaggaatagctggaagagaaaggacacagataacaaaggactaaagaaaatggtggggaaaacttacatattctacgtattttaagcgggtattgcactctatgaactgtttttactgcaacatggtctaattttttttttcagacggatgtgggtatggtggaatttgttggattaattaaggttgatattagacggggcacaaatcttgctgttcgtgatgtgatgtcaagtgatccatatgttatgcttaacctaggacaccaagtaagctcatcttgttaacagatgccagttatctctgaaaaaatatgcaatatatatttttcttactgccaaataacatttttcagaccatgaaaacgaaggtgataaagaacaccctgaatcctgtatggaatgaaagactaatgctatcgatccctcacccggtgccgcctcttaaattggtacatgctctttagtcataacaaatcatctaattttaatttttgccttgcccatcaatggagagtattgatcagtatctctatccagtgttgtagaatagctatgttgtgcaactttgtgtggcaagcaaattcttgatctttagtattcaagagttcaagactctaggttgcttttgaagtatagaaatttgctggctaaattcaatctgatttattgagttacctacttatggatataatgatctgaactcattttgcgtcaaaaaaaaatgatctgaacttacgagagcagagtgccttatttccccttaagaacagcaaagagagagtagcaaaagccaaattcaagcttgtgcttacatatatatagcctatgacaaaccgcatttttgtttggttggttctgaagtgagaattcttcgatcagatccaaacacatttgttacagataggatggaaacatggattacccactgatattcaaatttatgtacaaaaaagaaatgttctacaaactcacacattgcatctctatctgctcttctacctcctaatttaacagcaagtgttcgacaaggacacgttcagctccgacgaccggatgggcgatgtggaggtggacatccagccgctgatcgccgcggcgcgagaacacgagagctcggccgccatcgccggctcggtggaggtcacgaagctgctggcgagcgacgacggcacgctggccagggacagcgtcatctccgtcgtcgacggcaaggtgaagcaggacatcgcgctgaggctccagaacgtggagcacggggagctggagatcgagctcgagtgcgtgccgctcagccagtagtatagctatagctgctgtacacattttattgctactatagctggccgggatgaaaaatgctcgatctgcattcgctgtgggttgtgtgatcatatgcatggagcttaatttgcttctgtgttttactccatgcctgtatactttgtcaagttgtgtcatgttgagggcttaatgttcatgtcatcgtgtattaattagatatggtttgtataggtaggaaattaagggggaaatggatcgtctaaaacaactctaattttaggcttcaatgttggttttggctg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0382000, RefSeq:Os05g0382000