Os05g0382200

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Revision as of 10:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0382200| Description = Similar to Cation/H+ exchanger (Fragment)| Version = NM_001061939.1 GI:115463608 GeneID:4338641| Length = 3958 bp| ...")
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Gene Name

Os05g0382200

Description

Similar to Cation/H+ exchanger (Fragment)

Version

NM_001061939.1 GI:115463608 GeneID:4338641

Length

3958 bp

Definition

Oryza sativa Japonica Group Os05g0382200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18482335..18486292

Sequence Coding Region

18482335..18482496,18482593..18483612,18486113..18486292

Expression

GEO Profiles:Os05g0382200

Genome Context

<gbrowseImage1> name=NC_008398:18482335..18486292 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:18482335..18486292 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggtcaccgtgaagatggcgtcggacgggatgtggcagggggagaacccgctggacttcgcgctgccgctgctggcgctgcaggtggccgtcatcctggtgatcacgcagggcctcgcgctcgcgcttaagcccctgcgccagcctagggtggtcgccgagatcctgggtggcatcttgctggggccgtcggctctcggccggtggggccccttccgccgcaccctcttcccggcgtggagcgccgccgcgctggacaccgtctccggcctcggcctgctgctcttcctcttcctggtcggcctcgagctcgacttccgctccgtgcgccgcgtcgggccgcgcagcgtggccatcgccgcggcgggcatcgcgcccccgttcctcgccgccgcgggcctcgtgccgctcctcgacgtcgccgtcccggcgccgcgccgcgcgtccttcctcccgctctgcgtgttcgtcggcgccgcgctctcggtgaccgcgctccccgtgctcgcctgcatcctcaaggagctcagcctcctcggcgtgcccttcggcgacaccgccatggcggccgccgccgtaaacgacgtcttcgcttgggtcctcctcgccctcgcgctcgccgtctccggcggcggaggcggcgagccgaaggggccccctctcgcgccggtgtacatcctcgcgtcgggtgccgccttcgtggcgttcatgctcggcgcgctccgcccgctcatggcgcgcctggcgcgccgccttggccccgaccgcgcgggcgacctggcgtgcaccggcgccgtggcgtgcgtgctcctcgccggcgccgccaccgacgccatcggcgtgcacccggtgttcggcgcgttcgtgttcgggctggccatgccgcgggagggcggcctcgcggagcgcgcgggcgagaaggtggcaccgctggtgtccgggctgatgctgccgctctacttcgccacgagcggcctgcacacggacatcgacaacgtccgtggcgcggccgcgtggggcatggtcgcgctcgtcgtggccgtggccatcggcgggaagttcgccgggacgttcgcggtggccgccggcaccggcatgcccaggcgcgaggccgccgccctcggcgtggccatgagcgccaaggggctcgtcgagctcatcgtgctcaacatcggcaaggagaggaaggtgctggacgacacgacgtttgccatcttcgtgatcatggcgctaacgacgacggtgctcgcgacgccgttcatgacggcgctctaccggcgcacgccgacggcgaccacgccggagagcgatgacgtggagctcaatggtggcgacgcttgtccggcttag</cdnaseq>

Protein Sequence

<aaseq>MAAAAVTVKMASDGMWQGENPLDFALPLLALQVAVILVITQGLA LALKPLRQPRVVAEILGGILLGPSALGRWGPFRRTLFPAWSAAALDTVSGLGLLLFLF LVGLELDFRSVRRVGPRSVAIAAAGIAPPFLAAAGLVPLLDVAVPAPRRASFLPLCVF VGAALSVTALPVLACILKELSLLGVPFGDTAMAAAAVNDVFAWVLLALALAVSGGGGG EPKGPPLAPVYILASGAAFVAFMLGALRPLMARLARRLGPDRAGDLACTGAVACVLLA GAATDAIGVHPVFGAFVFGLAMPREGGLAERAGEKVAPLVSGLMLPLYFATSGLHTDI DNVRGAAAWGMVALVVAVAIGGKFAGTFAVAAGTGMPRREAAALGVAMSAKGLVELIV LNIGKERKVLDDTTFAIFVIMALTTTVLATPFMTALYRRTPTATTPESDDVELNGGDA CPA</aaseq>

Gene Sequence

<dnaseqindica>3797..3958#2681..3700#1..180#atggcggcggcggcggtcaccgtgaagatggcgtcggacgggatgtggcagggggagaacccgctggacttcgcgctgccgctgctggcgctgcaggtggccgtcatcctggtgatcacgcagggcctcgcgctcgcgcttaagcccctgcgccagcctagggtggtcgccgagatcctggtacgtactgaaatatatatactcctggatggagtattcccgattttgttttagtcgcaacgcatccaaccctttgattacgtatatgagcacatcatattcgtaattccattcctaaacatgtacgtgtactggaccacgtcaatccctcgatatatctaatacctaacaaaataaatagatcatttaaacccggtgatgtaaactcacttaattgtaaactagtagcaattgtttaggtatattagcatcatgctatattcaaattatacttaataaatatgtcaaacattattacaaaactaaattcaacggcctattattttgttggatattatattcgatggaacaacgcctaccttgagcatcttgcctacagattgaaatatgggtttggtgtgcttatatttggaattaaactgatgcatgtgcttacctataaaaatatgaggagtattctactcctcatatttctgggaaaaatattttttttccattgagacatgtccattcgtctcttatatgtcatccaaataaatataactttttttctaaaaaaaatgatatgatagattaatatatatcattcttcacatttctatgacaatttgctaaccgctacgttcacatttctatgacaatatgtatctcttaaaaaataattaggagatcataaggagaccggattaagaaatgcatatatgttagcgaaaggacgaaaacttttgctacatatataatgaggtcattttctctaccaacatgagcgatatcgatatgaaggccatgtttagatgggagggactaattttgatttctcttacaaaaattttaatccctcaaaaaaaattttagtccctccaccgggaacttacattccatccaaacagccccaagtagtagtgactaattaagtcagtgcatacatgcttagctagatttgtctcgcataaataaaaaaaacaaaagtggccctataattctttaataatgcgcgtcacatgtttggcattatttctcttgaacgtgttctctatatatctcccgagaatctaggattctcctaatgtacacacaacacaagggactaccaaactagagtatatagctaggcagccgcattttctagaagaggcacaacattgttgagatcatgaaagtactcccaattgtcattgaatataattgactatatattcagccagatgttgacgtgttggatggtgtacttgtacacagcaaaaaaagttaagtccactttttgattggggttatgcataagccacgaggacaaaacttcaacagttcagttattcccaccagaatttgagttttagatttaccacagattcaaatcatgtagttggcataactgatcgacaattcatattttctaatgatcaagccctagaattgacatgaatattcacaaactaagtcccgcatagctgtatttagtacgagtacttattttacctagaaaattttaggaggtactccatctgtccaaaaaaaaaccagcataagtgaaaatgtgacatcacctaaaacaataaatctgaacatgaggttatccggattcgttgtcttaggtgatgtcgcatccttcccgttaaattttttggggacggagagagtagtatatatcgcatgtgtatctgttcagtggtcaaaacacttaactctcctacatggaaagggagatgaccgatgtagctatatttatgacatcatatttttttattagaaacagtcacatttgttacacgataaattacatatatttgcacttcaattatcatgcaaatgttgatagctatattataaattttaatacttactgtataatttttcctaccatatatcagaaaattataataaaaaatttaattatctatatgaaaagggagatgggagaggtaaaaacatacttaaatattaaaaaagaggtagcaatcacatttttttaaaaataacctaaactaagaaaaactgtggctacatatttttaagcaaaaccggagggaaatatgcctgtttagctatctagaacacattaatttccagaaaactaatgacatactgtaacaatgaacattcattcgtacggcatgtccaagataaatagataatccatgctttatgcatttgctcttgttttcctgaatcatgcatgcctcataacaaataacctatatataaagtgttctagtatacttatgatcagtactctctccactccattttaaacacagggcatgagtttccatgaccaaatttaatcgttcatcttatttaattttttaaaaaataattaaaaatataagtcacgcataaagtatttttcatgttttatcatctaataacaacaaaaataataaccatagttttttttaaataagatatttttaaaagaccgacgatcaaagttggacacagaatggtatgaagggagtacatgatctgattgtttacttatacatatatgcatgctcgccagggtggcatcttgctggggccgtcggctctcggccggtggggccccttccgccgcaccctcttcccggcgtggagcgccgccgcgctggacaccgtctccggcctcggcctgctgctcttcctcttcctggtcggcctcgagctcgacttccgctccgtgcgccgcgtcgggccgcgcagcgtggccatcgccgcggcgggcatcgcgcccccgttcctcgccgccgcgggcctcgtgccgctcctcgacgtcgccgtcccggcgccgcgccgcgcgtccttcctcccgctctgcgtgttcgtcggcgccgcgctctcggtgaccgcgctccccgtgctcgcctgcatcctcaaggagctcagcctcctcggcgtgcccttcggcgacaccgccatggcggccgccgccgtaaacgacgtcttcgcttgggtcctcctcgccctcgcgctcgccgtctccggcggcggaggcggcgagccgaaggggccccctctcgcgccggtgtacatcctcgcgtcgggtgccgccttcgtggcgttcatgctcggcgcgctccgcccgctcatggcgcgcctggcgcgccgccttggccccgaccgcgcgggcgacctggcgtgcaccggcgccgtggcgtgcgtgctcctcgccggcgccgccaccgacgccatcggcgtgcacccggtgttcggcgcgttcgtgttcgggctggccatgccgcgggagggcggcctcgcggagcgcgcgggcgagaaggtggcaccgctggtgtccgggctgatgctgccgctctacttcgccacgagcggcctgcacacggacatcgacaacgtccgtggcgcggccgcgtggggcatggtcgcgctcgtcgtggccgtggccatcggcgggaagttcgccgggacgttcgcggtggccgccggcaccggcatgcccaggcgcgaggccgccgccctcggcgtggccatgagcgccaaggggctcgtcgagctcatcgtgctcaacatcggcaaggagaggaaggtatgtcttctttatacacgtatacgtctcacatgtgtccatgtacttcgatacgtacaaatatacgtatgtacgcgtgtatatatgtgtgtgcaggtgctggacgacacgacgtttgccatcttcgtgatcatggcgctaacgacgacggtgctcgcgacgccgttcatgacggcgctctaccggcgcacgccgacggcgaccacgccggagagcgatgacgtggagctcaatggtggcgacgcttgtccggcttag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0382200, RefSeq:Os05g0382200