Os07g0163900

From RiceWiki
Revision as of 20:31, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0163900

Description

Protein prenyltransferase domain containing protein

Version

NM_001065490.1 GI:115470712 GeneID:4342470

Length

2188 bp

Definition

Oryza sativa Japonica Group Os07g0163900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3458432..3460619

Sequence Coding Region

3458432..3458574,3458768..3460619

Expression

GEO Profiles:Os07g0163900

Genome Context

<gbrowseImage1> name=NC_008400:3458432..3460619 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3458432..3460619 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagctcggcgcgccaccgccggcggcggcggcggcggcggctgccgtctggcgagcccccaccttcgaggcccgccgcgccgccgacgcgagggagctccttgcggcgctgcttccgccgagccccaccgtccgccaagtccagcaggcgcacgcccgactcgccgtcctcgggctcgccgcctcgcgcgccatgccccacctcctcgccgtcctcccccgcctcctcccggacaagccgcgccaccgcggcgacgacggcggcggcgatggcgaccactacgcctacccgctcgcgctgttccggcgcgccaactccacctccgccttcgcgtccaacaacctcctccgcgtgctgccgcatccgctcccgctcaccctcttctcccgcttccggcgccgcaacccccactccttcaccttcctcctcgcctccatctccaaccacctcaacgccgcgggaccctccgcctccgcttgctccttcctgggctcccacgtgcacgccctcgccgtgaaggcgggcgccgcgggcgacctgttcgtgcggaacgcgctggtgcacttctacggcgtctccggcgacgtgggggcaatgcggagggtgttcgacgagctgccgcgcgtgcgggacgtcctcacgtggaacgaggttctcgcggggtacgtgcgagctggcatgatgaccgttgcgcgggaggtgttcgacgaaatgccagtgagggatgagatttcttggagcacgctggtgggcgggtatgtgaaggaagaggagctggaggtggcgctgggagtgttccggaacatggtggagcagggcgtgaggccgaatcaggctgcagtggtgacggcattgtcggcagcagcacggttgggcttgcttgaacatgggaagtttgtgcataatgtggtacagaggtcgggaatgccggtgtgtatgaatgtaggagcggcactcgtggacatgtatgcaaagtgcgggtgtgtggcggttgcgagggaggttttcgatggcatgaggaggagggatgttttcgcgtggaacgccatgatctgtggccttgctgctcatggtttggggagggatgcggtggagctcttcgagcggtttatcagtgagggtctgtcccctacaaatgtgacttttgttggtgtgctcaatggctgtagccgttctggtcttgttgctgaggggcgacgctatttcaaactgatagtggagaaatatcgcattgagccagaaatggagcattatggctgcatggttgatcttctgggtcgtgctggccttgttccggaagccattgaattgatcgaagggatgcatattgcacctgatccagttctctggggcacaatactctcttcttgcaagacgcatggcctggtggatttgggggtttctgttggtaacaagctaattgaactggatccaactcattctggctattatgtcctcctctcaggtatatatgcaaaggcaaacaaatgggatgaagtcagggaagtcaggaaattgatgtctagtcgcggtaccaacaagtcagccggctggagcttgatggaagcgcatgggaaggtgcacaaatttctagtaggagacacttatcacaaggattctgtgcagatctatgatacacttgacatgatcaacaaaaggttgacagaggcagggtatgtaccggatgtgtcatctgtattgcatgacattggggaggaagagaaggtgcacgcggtcaaggtgcacagcgagcgattggcaattgcttatggcttcatagttcttgaagctggcagcccaatccgtatcgtcaagaaccttcgtgtctgtggggattgccatgagttcattgccggcaacgccgatgagctcaccggggtaaagcaggtccagcgacggatccgggaggccggctgtgaggttcttcgtgtagatcatgctggtggtatggaggaggggcatgctaagcatggccgagcagattggggctaa</cdnaseq>

Protein Sequence

<aaseq>MQLGAPPPAAAAAAAAVWRAPTFEARRAADARELLAALLPPSPT VRQVQQAHARLAVLGLAASRAMPHLLAVLPRLLPDKPRHRGDDGGGDGDHYAYPLALF RRANSTSAFASNNLLRVLPHPLPLTLFSRFRRRNPHSFTFLLASISNHLNAAGPSASA CSFLGSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNE VLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVR PNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAR EVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSR SGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVL WGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLM SSRGTNKSAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSS VLHDIGEEEKVHAVKVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFIAGNADE LTGVKQVQRRIREAGCEVLRVDHAGGMEEGHAKHGRADWG</aaseq>

Gene Sequence

<dnaseqindica>2046..2188#1..1852#atgcagctcggcgcgccaccgccggcggcggcggcggcggcggctgccgtctggcgagcccccaccttcgaggcccgccgcgccgccgacgcgagggagctccttgcggcgctgcttccgccgagccccaccgtccgccaagtccagcaggcgcacgcccgactcgccgtcctcgggctcgccgcctcgcgcgccatgccccacctcctcgccgtcctcccccgcctcctcccggacaagccgcgccaccgcggcgacgacggcggcggcgatggcgaccactacgcctacccgctcgcgctgttccggcgcgccaactccacctccgccttcgcgtccaacaacctcctccgcgtgctgccgcatccgctcccgctcaccctcttctcccgcttccggcgccgcaacccccactccttcaccttcctcctcgcctccatctccaaccacctcaacgccgcgggaccctccgcctccgcttgctccttcctgggctcccacgtgcacgccctcgccgtgaaggcgggcgccgcgggcgacctgttcgtgcggaacgcgctggtgcacttctacggcgtctccggcgacgtgggggcaatgcggagggtgttcgacgagctgccgcgcgtgcgggacgtcctcacgtggaacgaggttctcgcggggtacgtgcgagctggcatgatgaccgttgcgcgggaggtgttcgacgaaatgccagtgagggatgagatttcttggagcacgctggtgggcgggtatgtgaaggaagaggagctggaggtggcgctgggagtgttccggaacatggtggagcagggcgtgaggccgaatcaggctgcagtggtgacggcattgtcggcagcagcacggttgggcttgcttgaacatgggaagtttgtgcataatgtggtacagaggtcgggaatgccggtgtgtatgaatgtaggagcggcactcgtggacatgtatgcaaagtgcgggtgtgtggcggttgcgagggaggttttcgatggcatgaggaggagggatgttttcgcgtggaacgccatgatctgtggccttgctgctcatggtttggggagggatgcggtggagctcttcgagcggtttatcagtgagggtctgtcccctacaaatgtgacttttgttggtgtgctcaatggctgtagccgttctggtcttgttgctgaggggcgacgctatttcaaactgatagtggagaaatatcgcattgagccagaaatggagcattatggctgcatggttgatcttctgggtcgtgctggccttgttccggaagccattgaattgatcgaagggatgcatattgcacctgatccagttctctggggcacaatactctcttcttgcaagacgcatggcctggtggatttgggggtttctgttggtaacaagctaattgaactggatccaactcattctggctattatgtcctcctctcaggtatatatgcaaaggcaaacaaatgggatgaagtcagggaagtcaggaaattgatgtctagtcgcggtaccaacaagtcagccggctggagcttgatggaagcgcatgggaaggtgcacaaatttctagtaggagacacttatcacaaggattctgtgcagatctatgatacacttgacatgatcaacaaaaggttgacagaggcagggtatgtaccggatgtgtcatctgtattgcatgacattggggaggaagagaaggtgcacgcggtcaaggtgcacagcgagcgattggcaattgcttatggcttcatagttcttgaagctggcagcccaatccgtatcgtcaagaaccttcgtgtctgtggggattgccatgagttcagtaagatggtgacaatggtttttcagagggagattattgtgagagatggtagtaggttccatcatatgaaagaagggaagtgctcttgccttgactattggtaaatgatcagttgattcttttagtgccaactagcagctatacatgttacatttacccaatgaactgcttcactcatctttggtggtggtagttgccggcaacgccgatgagctcaccggggtaaagcaggtccagcgacggatccgggaggccggctgtgaggttcttcgtgtagatcatgctggtggtatggaggaggggcatgctaagcatggccgagcagattggggctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0163900, RefSeq:Os07g0163900