Os07g0171300

From RiceWiki
Revision as of 20:31, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0171300

Description

Protein kinase-like domain containing protein

Version

NM_001065531.1 GI:115470794 GeneID:4342515

Length

6498 bp

Definition

Oryza sativa Japonica Group Os07g0171300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3805452..3811949

Sequence Coding Region

3806475..3806876,3807914..3808039,3808120..3808193,3808278..3808347,3808431..3808486
,3808578..3808649,3808717..3808811,3808967..3809030,3809111..3809240
,3809326..3809541,3809629..3809750,3810527..3810701,3810788..3810878
,3811040..3811197,3811330..3811518,3811626..3811685

Expression

GEO Profiles:Os07g0171300

Genome Context

<gbrowseImage1> name=NC_008400:3805452..3811949 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3805452..3811949 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccagagctgcgaagcagtactcgccaagcacgtctgaggtctaggaagcctgacgaccagaagccagcggaacaggctgcgaaaccagcgttgcctgctccacagagagcaggaaagcgtgttcctccccctgctatcaggggcagaaagggtgctgctgggagaagagggggagcagcaccaaggggtagaagaaaggcggttgaggttgttgatttggaggctggccagggtcgtggagattcccctaaacctgttgttggacaggcagttgttggtgaagcaaagaacgttaaggcacctgaggttgtcgccaataagggtttgcgaatggatggggaaagcgcagagaagcttgttgcggctgacgatgaatcatcactacctgtccctgagaggattcaagtaggtaattctccagaatatataactgacaggaaattaggtaaaggtggttttggtcaagtttatgttggtagaagggtatctggtggaactaatcgtactggtcctgatgcatatgaggttgcattgaagcttgagcatcgaaacagtaaagggtgcaattatggtgccccctatgagtggcaagtttaccataatcttaatggctgctatggcataccagctgtccactacaagggtcgtcagggcgactactatattcttgtcatggatatgcttggtcccagcctttgggatgtgtggaattcattagggcagacgatgtctccacatatgggtgcttgcattgctgtagaggccatttcaattcttgagaagctccattctaaagggtttgtgcatggtgatgtgaaaccagagaactttctgcttggccagcctggatcacctgacgagaagaagctttatcttattgatcttggtttagcatcgaaatggagggagtcatcagggcaacatgttgattatgaccaaaggcctgatatctttaggggtacaattagatatgccagtgtccatgcccatttaggccgtactggtagtaggagggatgatttagagtcattggcgtacacccttatatttctaataagaggaagattgccttggcaaggttaccagggtgataccaagagtttccttgtttgcaagaagaaaatggctacttctccggagatgctaagctgtttctgtccacctccattcaaacagtttcttgaagttgtcacaaatatgaaatttgatgaagagccaaattacgccaaactgatttctctctttgatagtttgattgaggtacctgcctcaagacctatcagaattgatggcgctcttaaggttgggcagaaacgtggaagaaaccatgaagaagatgagcaacccaagaagaaagttagattaggtagcccagcagctcaatggatttctgtttataacgccaggcgggccatgaagcaaaggtaccactataacgtggctgacaacaggcttcagcagcatatagagaagggtaatgaagatggtctatacattagttgtgtggcgtcttcagcaaatctttgggccctcataatggatgcaggaactggtttcctttctcaagttcatgagctctcaccagtttttctgcataaggactggataatggatcagtgggagaagaatttctacataacagcaatagctggatcagctaacggaagttctttagttgtgatgtccaaaggaacaccttactcccaacagtcatacaaggttagtgagtcattccccttcaagtggatcaataaaaagtggaaagaaggttttcatgtgacatctatggccaccgctggaaatcgctggggtgtagttatgtcaaggaactcaggttactctgaacaggttgtagaattggatttcctatatccaagtgaaggcatccatcggcgatgggagactggttacagaataacctcaatagcagcaacaaatgaccaggctgcttttatcttgagcataccgaaacggaagccagtagacgagacacaagaaactctccggacctctgccttccccagtaatcatgtcaaggataaatgggcgaaaaatctgtacatagcatcgatctgcttcgggcgaaccgtctgttga</cdnaseq>

Protein Sequence

<aaseq>MPELRSSTRQARLRSRKPDDQKPAEQAAKPALPAPQRAGKRVPP PAIRGRKGAAGRRGGAAPRGRRKAVEVVDLEAGQGRGDSPKPVVGQAVVGEAKNVKAP EVVANKGLRMDGESAEKLVAADDESSLPVPERIQVGNSPEYITDRKLGKGGFGQVYVG RRVSGGTNRTGPDAYEVALKLEHRNSKGCNYGAPYEWQVYHNLNGCYGIPAVHYKGRQ GDYYILVMDMLGPSLWDVWNSLGQTMSPHMGACIAVEAISILEKLHSKGFVHGDVKPE NFLLGQPGSPDEKKLYLIDLGLASKWRESSGQHVDYDQRPDIFRGTIRYASVHAHLGR TGSRRDDLESLAYTLIFLIRGRLPWQGYQGDTKSFLVCKKKMATSPEMLSCFCPPPFK QFLEVVTNMKFDEEPNYAKLISLFDSLIEVPASRPIRIDGALKVGQKRGRNHEEDEQP KKKVRLGSPAAQWISVYNARRAMKQRYHYNVADNRLQQHIEKGNEDGLYISCVASSAN LWALIMDAGTGFLSQVHELSPVFLHKDWIMDQWEKNFYITAIAGSANGSSLVVMSKGT PYSQQSYKVSESFPFKWINKKWKEGFHVTSMATAGNRWGVVMSRNSGYSEQVVELDFL YPSEGIHRRWETGYRITSIAATNDQAAFILSIPKRKPVDETQETLRTSAFPSNHVKDK WAKNLYIASICFGRTVC</aaseq>

Gene Sequence

<dnaseqindica>1024..1425#2463..2588#2669..2742#2827..2896#2980..3035#3127..3198#3266..3360#3516..3579#3660..3789#3875..4090#4178..4299#5076..5250#5337..5427#5589..5746#5879..6067#6175..6234#aggtaggcagcagagggaggtggcgcacacggcgcaaaacaactcgtccccccgccccgcaaggaaggggaggcgagacgcgacgagagcccaaaggcaaaagcccaccaccaccaccacgaggaggaggaggagctatctcgccaacaccaccaccaccaccagcgaggacgaggaggaggagagagaggagagagcttcccgtctccgcgcggctcccgaggcgacgccgcctccgccgccgccgccgcccgccgatgtaagcgcctcccatctctcctccacgggcgacggtctgcagatttttgttttttgttttttttttaattttttcgggcgtcggttcccgcggcgatcgggggtgttttggtattggggatcgtggcgtggtggattgatgcggggtggtcgtgctccgattcgggcgttcgccggcggatttgggttcccggagacgcggttttccggggcgcgcatgcgttggatttgggcggggttggatcggggatgcaggtggtggattgtaggttggaggcaatttgggggatggataggcggtaatctggtagcgaaggttggatttttttttcttctcatcgattggaaatctgctcgggggcatcgggtgatggggatgcttccccctttcttttccatgtggattgccgcatttgattcttcgctaaaggagatggtgtgatggggaagtcgggcgcctctcgatggcggattctgacggcgatgaaggatccagctcgatcgattgttacatacttcgttttttcaaatctgatttggttgctacccagagatgatgcagtagtcgtgtgtttggtcgcagtctggtgattctcgtggtaatttggtagttggaggaattgttatgcataattttgtgtatgtttgcgagtatattcttttgttctgtgtattgatctatggcttgaattgtgtgtttgtgcatgtggagattggaaggatcccagagggctggagaggtgacctgagttgcatggggagaggatgccagagctgcgaagcagtactcgccaagcacgtctgaggtctaggaagcctgacgaccagaagccagcggaacaggctgcgaaaccagcgttgcctgctccacagagagcaggaaagcgtgttcctccccctgctatcaggggcagaaagggtgctgctgggagaagagggggagcagcaccaaggggtagaagaaaggcggttgaggttgttgatttggaggctggccagggtcgtggagattcccctaaacctgttgttggacaggcagttgttggtgaagcaaagaacgttaaggcacctgaggttgtcgccaataagggtttgcgaatggatggggaaagcgcagagaagcttgttgcggctgacgatgaatcatcactacctgtccctgagagggtatgagtaatgacatctctccagtatttcttaaaatctcttcacgaattgccagttccatttacatttgttagctcttgataggttttgaagttcattcaattaaatcaaatccattgcttgtagccttctccttgcatttgtactctcagtattccattttgttctagatttagcccaaacatatggaactttaatacttgtctattctgtacagaataaacacaggcttgtcacacttatctttaaagcacataaaagattaaaaagtatgtcgaatgtcgaggctctccatctcacctgcagtcctgcacttcacccattgtttccttttcttcactattcatgacgctgacgcattttgggctcatttatcaatgtagactttgggcaagtttggaattgctctagtttgctgtgcaacctagtagatacagccttacatggacttttgcaaaacttttgtaatgcattactcttgtggctcttaaggaaaattatatcaattagttgatatggcacacagtagtaaaatagaattgcctcaataacacttctgatgacaggcacttcctacagtgctggttagaggctggccagagtagattgcttgcactggaatatctgacttttttccaaaagatgcataaaagtaaccccatgtaggtcctggcaatatcccttgaacaggatcatcatgtcctgtccaatctggctcacaagcccagtagattgtcatggaaaaggttattacatattcaagcttgagtatggttgcacaggacctgaaaactgaaagtagataagagttgatttattcccctctcatggtctcacctcccaagtttgattattgtgcctttaataatttatttttaatgataaagcaactccattggtcccccccttagcttttgcataaagtcacatagctggaaaaattcttctctaagatggtgtgatattggacctttacgtaatagatcttatttttgtcatgcttctaggaagcatctaatgttttgtcattgctgcagattcaagtaggtaattctccagaatatataactgacaggaaattaggtaaaggtggttttggtcaagtttatgttggtagaagggtatctggtggaactaatcgtactggtcctgatgcatatgaggtttgctctctaaatagaatatattttgctgtaaatatatccttttcacattaatacaatctaaaaatgaccctatgtaggttgcattgaagcttgagcatcgaaacagtaaagggtgcaattatggtgccccctatgagtggcaagtttaccagtatgtacttaatacagtcatctttcatttgtaccagattattctctgctctttgagtttactgattattacctttcctactagtaatcttaatggctgctatggcataccagctgtccactacaagggtcgtcagggcgactactatattcttgtgagtttactgaagttaataaccattctatgctgccatggagctcaacgtatcttgacttaatcttaattaaaattttccaggtcatggatatgcttggtcccagcctttgggatgtgtggaattcattagggcagacgtaagcacctagatttatcccattcattgctgttgcctcgtgttcctcatcatttgtgtttatgtattaaaagtaataacatcattaacaggatgtctccacatatgggtgcttgcattgctgtagaggccatttcaattcttgagaagctccattctaaagggtaacttattatctttgttctttatcaggttatccttagatgcaccattcttaatttatgtttgtaggtttgtgcatggtgatgtgaaaccagagaactttctgcttggccagcctggatcacctgacgagaagaagctttatcttattgatcttggtttaggtaagctattaatagtttgtttcatttcaccacattttcatggcatacactaggactaaaatcttatgctttatacacttgtatttccaattgttgttgcccctattagttttcaagtattttttgtatgatatggcattgtccaaattgtacagcatcgaaatggagggagtcatcagggcaacatgttgattatgaccaaaggcctgatatctttaggttggcaatattctctctgtacctgctatctgtctctcatatagtgctttttacttatttttatcttcgttttttttcaggggtacaattagatatgccagtgtccatgcccatttaggccgtactggtagtaggagggatgatttagagtcattggcgtacacccttatatttctaataagaggaagattgccttggcaaggttaccaggtatattttaatatgcctattaacttcatgataccaacttcagttcagattagccaattctaatgttgcttgcttaattatgcagggtgataccaagagtttccttgtttgcaagaagaaaatggctacttctccggagatgctaagctgtttctgtccacctccattcaaacagtttcttgaagttgtcacaaatatgaaatttgatgaagagccaaattacgccaaactgatttctctctttgatagtttgattgaggtacctgcctcaagacctatcagaattgatggcgctcttaaggtctgtaccacccaccattttactcacttccatattttgtttaggtctgctccatatctgtccatgaacccttctcttaaattataggttgggcagaaacgtggaagaaaccatgaagaagatgagcaacccaagaagaaagttagattaggtagcccagcagctcaatggatttctgtttataacgccaggcgggccatgaagcaaaggtaattacatcaaagaactagatgatataaagcatgatcgacctgcatttgtttagtctaggtacttgcttttcttggatgcaaacaatagtaatttgaaaacacaagttactgccttgtctgtgataaattaaatatttcatttaattttttttgaattgtcaaatcaaactcgacattttcttaaaaagacagttttgggtacctgacagaccatttaattttaattcaagataataatccattgcacattgttcatgttaaatttggatcacatgtcatgttactcctgctccatgagtccagacaaactactttttaaacatgcaccgtttcaggcccaatacagatgatcttgattgctactaactatttattaattgtcacatctgaattttgatagcccaaaacctagcatgatacatttaactctggtgcgctgattagaacattctaaaagtgacctgagtcctggaatcatttgagtgcagcatatatagttgtaaatctaaaaagctaaataactcttcactaactagacagcacgtgcctgatattaatacagcttgtaagtgctagtgatcatgggttttagtttgcgcttgtttcttttttctttcaaaatttacaatgtcatcttgttgtgattctctgtgcatgcctttctcttgaacaggtcttgaaatttggttgatgaatcattatcactcttttatggtgtgacaatattgttgctacaaggaaattaataccaagttatgctacttctttgttaggtaccactataacgtggctgacaacaggcttcagcagcatatagagaagggtaatgaagatggtctatacattagttgtgtggcgtcttcagcaaatctttgggccctcataatggatgcaggaactggtttcctttctcaagttcatgagctctcaccagtttttctgcataaggtaaagtacaatctgttgaggtgtgataattagtacttggattatttgtttgctgagagtcctaactctgtttcaattatacataggactggataatggatcagtgggagaagaatttctacataacagcaatagctggatcagctaacggaagttctttagttgtgatgtccaaaggtctgggatgtgtttcttattagtcattttatatcccgaccattcttctttgacgatgaattatccatatgtttcatatggacttaatcattttgttgctccccatgagttaacctggcttagttgtgatcacctatagtttgatatgtccattattgcaggaacaccttactcccaacagtcatacaaggttagtgagtcattccccttcaagtggatcaataaaaagtggaaagaaggttttcatgtgacatctatggccaccgctggaaatcgctggggtgtagttatgtcaaggaactcaggttactctgaacaggttagaataattgcttgacctagttcatattcagtccacaaatttggcaatttatattcctgtgagcattccattatttactgtagaatatatctacttatgaagctaacctttttctcatgccctttttaggttgtagaattggatttcctatatccaagtgaaggcatccatcggcgatgggagactggttacagaataacctcaatagcagcaacaaatgaccaggctgcttttatcttgagcataccgaaacggaagccagtagacgagacacaagaaactctccggacctctgccttccccagtaatcatgtcaaggtatatacattatcgcagctcattgaaatccggccgtgtcttgtaaaaaacaaacataatttctcgcgtttcggagttcagtaacatagccggtgtgctgttcgcaggataaatgggcgaaaaatctgtacatagcatcgatctgcttcgggcgaaccgtctgttgacggtgtggctggctggctgccttccattgaagttgaagcgattgccattcgagagatgaggagatctggagatggaagaggattcgcatgatcattgggctagggagcattagaagtttcggtattttgcaactgtaaagaaatgttgtattaccggatgccggccttgtgggcctttttccataaaagaagctaacacattcttgcatgttgaaatcgatatctctgcatttttatcatacgttctcccgatgtttcttttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0171300, RefSeq:Os07g0171300