Os07g0193200

From RiceWiki
Revision as of 20:32, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0193200

Description

Ankyrin repeat containing protein

Version

NM_001065640.1 GI:115471012 GeneID:4342634

Length

3199 bp

Definition

Oryza sativa Japonica Group Os07g0193200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5062778..5065976

Sequence Coding Region

5062778..5063089,5063912..5064194,5064883..5065976

Expression

GEO Profiles:Os07g0193200

Genome Context

<gbrowseImage1> name=NC_008400:5062778..5065976 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5062778..5065976 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccacggctgcacaaggcggcggtgcaggggaacacggcgagcctggcggcgctgctgggggaggagcagggcggcggcaagatcctcaactcgacgacgccgcaggggaacacggcgctgcacatcgccgccgggctcgggcgcgtcgcgttcgccgaggccgccgccgccgagcacggcgacctcctcgtcgccaggaacgaccagggggacacgccgctgcacctcgccgccagggccggcaagatggccgtcgccgacatgctcatcaccttcatcaccatggctgggccttgttggccggaggaggagccactgatgatgatgaacaagacacggaacacgccgctgcacgaggcggtgaagcagcggcggagcgcggtggcgctgcggctgctggaggcggagcccaactgcgggcacacgcccaacgtggacatgcagacgccgctgcacatcgccgcccgcgagggcctcgccgacgtcgtcgacaagatcctcgaccagccatgggtccccgagaagttcgtcaccgccgacaacgtcagcggcaccgccctccaccaggccgtcctcggcggccacacccgggtggtggagatattgctgatgaagacggcgccggggctgatcgacctgacggacgccgtcggcaacacggcgctgcacttcgcggcgcagaagaacgacaagcgcatggtgcggatgctgctcgaccacaagcccgacctcgcccaccgccgcaacgagcggcagcagtcggcgctccacgtcgcggcctactacggctcgacggcagcggcggcggagctgctccggcacagccccgacgcggcggagatgctggaccgggagggccggaacgccgtgcacgtcgcggtgtcgagcggcaaggtggacgcgctccggtgcctcctcggccgcgtccgccccgccgaggtggtgaaccgcggcgacaactccggcgacacgccgctccacctcgccgcgaagatggcccgcatcaagtcggcgctgatgctgctcagggacccccgcgtcgacccctgcctcctcaaccgcgaaggccactcggcgcgcagcctcgtggaggagcgcgtcgccggcggcgagatggacgcctacgtcgtctacctctgggagaagctcaagaagtacgagtcgcggcggtgcaagaaccagcagctgccgccggtggcgacgtaccagtcgctgcgcagccggcggccgggctccggcagcaacgacgagtacttcgagctcagcgtcggcacctacaccctcgtggccaccctcatcgccaccgtcaccttcgccgccacattcaccatgcccggcggctacaaccagaacacggggctcgccatccacgccgacagggcgccgttcaagatcttcgtggtgtccaacaccgtcgccatgtgcagcgccatcgtcgtcgtcttctgcttcatctgggcgtggagggaccccgtcaagttcaagctcgaccagctcacctggggacaccgcctcaccgtcgtcgcctgcctcgccatgatcgtctccctcatgacgtccgtctacctcaccgtcctccccacggagcggtggctggcgtacctggtcatcgccatcggagcctgcactccggccgtcgtcatactcatactgcgctgggaggtgttctacgtgccattgtga</cdnaseq>

Protein Sequence

<aaseq>MDPRLHKAAVQGNTASLAALLGEEQGGGKILNSTTPQGNTALHI AAGLGRVAFAEAAAAEHGDLLVARNDQGDTPLHLAARAGKMAVADMLITFITMAGPCW PEEEPLMMMNKTRNTPLHEAVKQRRSAVALRLLEAEPNCGHTPNVDMQTPLHIAAREG LADVVDKILDQPWVPEKFVTADNVSGTALHQAVLGGHTRVVEILLMKTAPGLIDLTDA VGNTALHFAAQKNDKRMVRMLLDHKPDLAHRRNERQQSALHVAAYYGSTAAAAELLRH SPDAAEMLDREGRNAVHVAVSSGKVDALRCLLGRVRPAEVVNRGDNSGDTPLHLAAKM ARIKSALMLLRDPRVDPCLLNREGHSARSLVEERVAGGEMDAYVVYLWEKLKKYESRR CKNQQLPPVATYQSLRSRRPGSGSNDEYFELSVGTYTLVATLIATVTFAATFTMPGGY NQNTGLAIHADRAPFKIFVVSNTVAMCSAIVVVFCFIWAWRDPVKFKLDQLTWGHRLT VVACLAMIVSLMTSVYLTVLPTERWLAYLVIAIGACTPAVVILILRWEVFYVPL</aaseq>

Gene Sequence

<dnaseqindica>1..312#1135..1417#2106..3199#atggatccacggctgcacaaggcggcggtgcaggggaacacggcgagcctggcggcgctgctgggggaggagcagggcggcggcaagatcctcaactcgacgacgccgcaggggaacacggcgctgcacatcgccgccgggctcgggcgcgtcgcgttcgccgaggccgccgccgccgagcacggcgacctcctcgtcgccaggaacgaccagggggacacgccgctgcacctcgccgccagggccggcaagatggccgtcgccgacatgctcatcaccttcatcaccatggctgggccttgttggccggaggtatccgtccgttttctttcttctagctttaattcgtcgtcaccggttgaatacagggtttgatactatttcagttaggctatttctgttgggtaccgatacaactgaaatttcgggtatttcgttttgacactatttaaaatttgcacaacgatttgtcaaatataaataaaattttctaaattcacaaaaaaaaattgtaaataacctgaaaattttaggccaaatagttttctaggtgtggggtccaatagactcgaagtttcagaaatttcgttttagaattttgaaccctggttgaatataagaaattcgaccatccggtatataattgtgacaagagagttgccatttttttgcaatgtagaatttgatactttttataaatctcatatgtaagaaatcgagagctgtcaaattcagcattataatgtgtgttagtaccttttggtaatcactaaaagacatcactcattgtgatatacttttatctgtttaaaaatataaacaaccataaaattaacatggtgtgaaaattctttcaaaaaatgaatttagtaataccatatattttgtcattttagttgtacaaatgtcgattcccttttttacagagctatagagccttatatttcaagacgaatgaagtatattcttttcaaataaatacattcttgctcctacgagtgctttgcgagttgataattacgttactctccctccgtgtagggaaatataaagtatattttgaccatacaattttggattaagatttaagactataatatttatgcgaaaaatgtacgtcatgtatgtatgtaggaggagccactgatgatgatgaacaagacacggaacacgccgctgcacgaggcggtgaagcagcggcggagcgcggtggcgctgcggctgctggaggcggagcccaactgcgggcacacgcccaacgtggacatgcagacgccgctgcacatcgccgcccgcgagggcctcgccgacgtcgtcgacaagatcctcgaccagccatgggtccccgagaagttcgtcaccgccgacaacgtcagcggcaccgccctccaccaggccgtcctcggcggccacacccgtaagaagaaattttgctcaaattaattcaaagagtactctttttgatgaattccagtactcaatatttttttttccacatccaacccctgaatgttaatgaatctagacatatatctcaatatgaatgtggtaaatgttagaatgacctacatgatgaaacggagggagtaacatttatatgttcaaaccttcacttaaactttgctttcttaccatgcttacgctcttacacataacatcattatataagtataaatttaataaccaatgattgatgatatgtaaatatgttttattaattattcaaaaactacatactccctccgtcctttaatattagcaacctagaaccggataattagttttatggtctaatgaatcagtcaggaggcctgtccagattcattatatgaaacgtcacatcctatcctagattgctagttgctatattatgggatactgggagtaattgtttaagcttgcgattttcaaaactatcttagcggtaaataatgaatgatattacaaagtttgggattgaaagtccagttttaaagtgttagatcaccgtcttccatcgttagtttagaggggtatatggatacttttaaaaaaaaaggtgaatagatttttgaggcatttgaatcaaatttgaagagatttgagtgtgtttgtgtgtggagcaggggtggtggagatattgctgatgaagacggcgccggggctgatcgacctgacggacgccgtcggcaacacggcgctgcacttcgcggcgcagaagaacgacaagcgcatggtgcggatgctgctcgaccacaagcccgacctcgcccaccgccgcaacgagcggcagcagtcggcgctccacgtcgcggcctactacggctcgacggcagcggcggcggagctgctccggcacagccccgacgcggcggagatgctggaccgggagggccggaacgccgtgcacgtcgcggtgtcgagcggcaaggtggacgcgctccggtgcctcctcggccgcgtccgccccgccgaggtggtgaaccgcggcgacaactccggcgacacgccgctccacctcgccgcgaagatggcccgcatcaagtcggcgctgatgctgctcagggacccccgcgtcgacccctgcctcctcaaccgcgaaggccactcggcgcgcagcctcgtggaggagcgcgtcgccggcggcgagatggacgcctacgtcgtctacctctgggagaagctcaagaagtacgagtcgcggcggtgcaagaaccagcagctgccgccggtggcgacgtaccagtcgctgcgcagccggcggccgggctccggcagcaacgacgagtacttcgagctcagcgtcggcacctacaccctcgtggccaccctcatcgccaccgtcaccttcgccgccacattcaccatgcccggcggctacaaccagaacacggggctcgccatccacgccgacagggcgccgttcaagatcttcgtggtgtccaacaccgtcgccatgtgcagcgccatcgtcgtcgtcttctgcttcatctgggcgtggagggaccccgtcaagttcaagctcgaccagctcacctggggacaccgcctcaccgtcgtcgcctgcctcgccatgatcgtctccctcatgacgtccgtctacctcaccgtcctccccacggagcggtggctggcgtacctggtcatcgccatcggagcctgcactccggccgtcgtcatactcatactgcgctgggaggtgttctacgtgccattgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0193200, RefSeq:Os07g0193200