Os05g0389400

From RiceWiki
Revision as of 10:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0389400| Description = Biopterin transport-related protein BT1 family protein| Version = NM_001061968.1 GI:115463666 GeneID:4338671| Length...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0389400

Description

Biopterin transport-related protein BT1 family protein

Version

NM_001061968.1 GI:115463666 GeneID:4338671

Length

3084 bp

Definition

Oryza sativa Japonica Group Os05g0389400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18849564..18852647

Sequence Coding Region

18849882..18850155,18851270..18852312

Expression

GEO Profiles:Os05g0389400

Genome Context

<gbrowseImage1> name=NC_008398:18849564..18852647 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:18849564..18852647 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaaggagaggaagatggagggggagaggagggtggaggcgacgcggcggtgggtgatcgcggtggggttctgggtgcaggggttccggctgttcccatggctgggcgtcaacttcttcctcaaggacggcatgggcgtcgccgcctcctcgctgcagatcctccaggcgtccgccaacctccccatggtcgccaagccgcttctcggcctcctctccgacgccgtccccatccgcggccaccgccgcctcccctacgtcgccatcggcgctctcttgcaggcaatttcatggttagcaattgccctctggccagctatttctcttccagttcttaccatttttctcctcttgagcaactttggtgcatccatatgtgaggttgccaatgatgccattgtagcagaagctgggaagcaagcaaccttgtcctcagggtcaggtcagcttcaatcctttgcttggatgtttggttcatctgctggcgctttaggaaatcttgttggtggcattgcactcagttacttttctccaaaaatcatgtttctgttttttgcaatccttctcgtgctccagttctgcactactgtggctatacctgaaagctccctccaactcccaaaggcagatactaatctatcagctgtctccagcgtccgtaagcaaatcaaagagctgtcatatgcgctgtgtatgcctgaaatattttggtcagtcatttggttttcattgtcctatgctgccataccatttctacttgggaccatgttcttctatcagactgaagtgttaagacttgactcatcagttatcggtttgtccaaggtttttggacaagtaactctattagcttggagtgtggcatacaacaagtacttcaaaacaacacctgcacagaaggttttatcagttctgcagtttcttacagcactcgtaatgctgtcagatgtactatttgttcagggaatatacagaaacttcggaataccggattccatgtacacaattgttttctcagggttgttggagggtcttatgttgttcaaggtgctgcccttcagtgttcttgttgcaaaactttgcccttctgggtgtgagggatcacttatggcttttgtcatgtctgcacttgccctcgcaactatcatcagcggttatcttggggttgcacttgctgaattcatgggagtatctggaggtgatttctcagcgctgccgacttgtctgttgattgaggctgcatgcacaatgctaccactctttttctcctcattgataaaagagaggagagaaaaggagaagaaagaagaatag</cdnaseq>

Protein Sequence

<aaseq>MEKERKMEGERRVEATRRWVIAVGFWVQGFRLFPWLGVNFFLKD GMGVAASSLQILQASANLPMVAKPLLGLLSDAVPIRGHRRLPYVAIGALLQAISWLAI ALWPAISLPVLTIFLLLSNFGASICEVANDAIVAEAGKQATLSSGSGQLQSFAWMFGS SAGALGNLVGGIALSYFSPKIMFLFFAILLVLQFCTTVAIPESSLQLPKADTNLSAVS SVRKQIKELSYALCMPEIFWSVIWFSLSYAAIPFLLGTMFFYQTEVLRLDSSVIGLSK VFGQVTLLAWSVAYNKYFKTTPAQKVLSVLQFLTALVMLSDVLFVQGIYRNFGIPDSM YTIVFSGLLEGLMLFKVLPFSVLVAKLCPSGCEGSLMAFVMSALALATIISGYLGVAL AEFMGVSGGDFSALPTCLLIEAACTMLPLFFSSLIKERREKEKKEE</aaseq>

Gene Sequence

<dnaseqindica>319..592#1707..2749#tctccaccacgcgcctacccgcacgccgagctgtcgccgcgtgtgcccccgcctcgttccatcgccttcgcgtcgcgctgtgcccactaaaacaatccggccagttaacacttcacacccccgcgccctctcgtcccccttcctacgtgtccccctccctgatcaagaacggatcaccggctcggcgccccactctcttcttggatcggggagcgggagagggggaggaagaggcggcggatcagaagatttgggcggcggcggcggcggcggcggcggcggcggaggtggtgtgggtgggtgagtgagtgaggagtgatggagaaggagaggaagatggagggggagaggagggtggaggcgacgcggcggtgggtgatcgcggtggggttctgggtgcaggggttccggctgttcccatggctgggcgtcaacttcttcctcaaggacggcatgggcgtcgccgcctcctcgctgcagatcctccaggcgtccgccaacctccccatggtcgccaagccgcttctcggcctcctctccgacgccgtccccatccgcggccaccgccgcctcccctacgtcgccatcggcggtatgtatatgctcccactcccactcccactcgttcctctcctcccttccccccctgaatttcccgtcccagatccagaattcctctcacatctcaactttgcgcggaacccgtgtcgccgaattgtgatgcggaattataataatctcaaatctgttcgtcttgcctgggcgcgcctggccatccaatgcagcatttcgttagagcagtatgtgaataactgaatatgcatagcatctccatctttagcattaacctcactgcacattcttttcttgcatttgtttggaggcgcatcacctaatcctgtggcagctggcgacaatggcatcgccgcaaaggatatgctctgatgctcacggactttgtcctcttgattcttctcaccctttccctttgtttcggtttacttttcatttttgtgcataatttgtagtatctgtcagtcatcttttcccgtattaacctttgacagcaacaacttttatctaatgctccaccaaatttgtcctcctgttagtatcacacattcgcaaagcaacaagcaagtaatcccttgccaaccagctcacgcacggcatgaatatttcatctactttaggactttgggtgtggccctttcggtccactttaattaaagctgtgttgaaaaacaagcacagaggaatgtcatgatgaaattcttcaaggatgaatggatagtgaaccatctcactccaacatcacataacttgggattttatatgtgcaaattctgtgtttttatcacaaactttttgaatgccatcaagttagtttaacctcagtgaggcctttaaactctagcttgcgttaagaagtttgctaaccggaaatatgacataaggataggcccgctatggaagttcagggacctaagtggcatgttaagcaatgaacagttgaatgtaaatgactgaaccaaatagggatggacataattgacaagatcatatgcctaaggacgttgctataatttacaaaatgaagtatacaaaattgggatatgcttactgtgcattgcaatgcctttttcttcttttgcgcttgtattagactatgatactaacctgacttgttattgctatctgtgcagctctcttgcaggcaatttcatggttagcaattgccctctggccagctatttctcttccagttcttaccatttttctcctcttgagcaactttggtgcatccatatgtgaggttgccaatgatgccattgtagcagaagctgggaagcaagcaaccttgtcctcagggtcaggtcagcttcaatcctttgcttggatgtttggttcatctgctggcgctttaggaaatcttgttggtggcattgcactcagttacttttctccaaaaatcatgtttctgttttttgcaatccttctcgtgctccagttctgcactactgtggctatacctgaaagctccctccaactcccaaaggcagatactaatctatcagctgtctccagcgtccgtaagcaaatcaaagagctgtcatatgcgctgtgtatgcctgaaatattttggtcagtcatttggttttcattgtcctatgctgccataccatttctacttgggaccatgttcttctatcagactgaagtgttaagacttgactcatcagttatcggtttgtccaaggtttttggacaagtaactctattagcttggagtgtggcatacaacaagtacttcaaaacaacacctgcacagaaggttttatcagttctgcagtttcttacagcactcgtaatgctgtcagatgtactatttgttcagggaatatacagaaacttcggaataccggattccatgtacacaattgttttctcagggttgttggagggtcttatgttgttcaaggtgctgcccttcagtgttcttgttgcaaaactttgcccttctgggtgtgagggatcacttatggcttttgtcatgtctgcacttgccctcgcaactatcatcagcggttatcttggggttgcacttgctgaattcatgggagtatctggaggtgatttctcagcgctgccgacttgtctgttgattgaggctgcatgcacaatgctaccactctttttctcctcattgataaaagagaggagagaaaaggagaagaaagaagaatagaattcacctataggattcgatgaggttgtactggtgctcgttatactttacagtcatctttgggatcatatggatttgccgatagttcggtttcataatcagaacatagctggtggacacaatttaaaagactaggttcctcgagaggttttcagtgtttgtcgagaatcatgttcagtgtagatggcatatttgtacctatatttgtgttaccattcttctatagatcaagtcttgtttcatgtaactagtattctttttgtgtatgctaatctgttttttgtagatgaaacaatataaatgttttgtgcatcttaaaagtgttattggctcct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0389400, RefSeq:Os05g0389400