Os05g0390000

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Revision as of 10:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0390000| Description = Lipase, class 3 family protein| Version = NM_001061973.1 GI:115463676 GeneID:4338677| Length = 1437 bp| Definition ...")
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Gene Name

Os05g0390000

Description

Lipase, class 3 family protein

Version

NM_001061973.1 GI:115463676 GeneID:4338677

Length

1437 bp

Definition

Oryza sativa Japonica Group Os05g0390000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18893214..18894650

Sequence Coding Region

18893214..18894650

Expression

GEO Profiles:Os05g0390000

Genome Context

<gbrowseImage1> name=NC_008398:18893214..18894650 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:18893214..18894650 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcccatctcctgccgcgaactctccccgcacctctcctctctcccccgcgccgccgccaccaccaccgcccacacgcacctctccttccgacgcgctccacctccgtgccgcctcctcaccggcacagccagcgacgacggcgacaggctgcgcctcctcccctccgcggccacgagggacgatgcgctcgcctccctcgtcggccagctcgagcacgacgtcgtcgttcgccacggacaagcggcggaggaggaggaggaggaggaggaggatgaggagctgtatcaccacgatagccaggacctcggggcggcgcggaggcgccatcaccggcagcaccaccaggacgggcacgagctggcggcgcggtggcgggagatccacgggcgcgacgactgggcggggctgctcgacccgatggacccgctgctccgctcggagctcatccgctacggcgagttcgcgcaggcgtgctacgacgccttcgactacgacccgtcctcccgctactgcggcagctgcaagtacccgcgccgcgccttcttcgaccgcctcggcatgcccgccgccgcgcggggctacaccgtgacccgctacctctacgccacctccaacttccgcttcccaaacttcttctcgcagtcgcgcgcgggtgccaagatctggagccagcgcgccaactggatcggctacgtcgccgtctccaccgacgaggagaccgcgcgcctgggccggcgcgacatcgccatcgcgtggcgcggcacggtcacgcgcctcgagtgggtctccgacctcatggacttcctccgccccgtcgccgacgagggcatcccgtgcccggaccgggaggtgaaggtggagtccggcttcgtggacctctacaccgacaaggaccccacctgccgcttctgcaagtactccgcgcgcgagcaggtgctcacggaggtccgccgcctcgtcacccgctacgccgcgctcggcgaggacgtgagcgtgacggtgacggggcacagcctcggcagcgcgctggcgatgatcagcgcgtacgacatcgcggagtcgggcgccgcgagcgcggcgcacggcggcgggaaggaggcggcggcggcggtgtgcgtgtactcgttcgcggggccgagggtggggaacgcgaggttcaaggagaggttcgagggggagctcggggtgaaggcgctgcgggtggtgaacgtgcacgacggggtggcgcggatgccggggatcctgctgaacgagggggcgccggcggcgctgcggcgggtggcggagggcatcctccgggtgccgtggtgctacgcgcacgtcggcgtggagctcgcgctcgaccacaagcggtcgccgttcctcaaggacacgctcgacccggcctgcttccacaacctcgaggcgcacctccacctcctcgacgggtaa</cdnaseq>

Protein Sequence

<aaseq>MAPISCRELSPHLSSLPRAAATTTAHTHLSFRRAPPPCRLLTGT ASDDGDRLRLLPSAATRDDALASLVGQLEHDVVVRHGQAAEEEEEEEEDEELYHHDSQ DLGAARRRHHRQHHQDGHELAARWREIHGRDDWAGLLDPMDPLLRSELIRYGEFAQAC YDAFDYDPSSRYCGSCKYPRRAFFDRLGMPAAARGYTVTRYLYATSNFRFPNFFSQSR AGAKIWSQRANWIGYVAVSTDEETARLGRRDIAIAWRGTVTRLEWVSDLMDFLRPVAD EGIPCPDREVKVESGFVDLYTDKDPTCRFCKYSAREQVLTEVRRLVTRYAALGEDVSV TVTGHSLGSALAMISAYDIAESGAASAAHGGGKEAAAAVCVYSFAGPRVGNARFKERF EGELGVKALRVVNVHDGVARMPGILLNEGAPAALRRVAEGILRVPWCYAHVGVELALD HKRSPFLKDTLDPACFHNLEAHLHLLDG</aaseq>

Gene Sequence

<dnaseqindica>1..1437#atggcgcccatctcctgccgcgaactctccccgcacctctcctctctcccccgcgccgccgccaccaccaccgcccacacgcacctctccttccgacgcgctccacctccgtgccgcctcctcaccggcacagccagcgacgacggcgacaggctgcgcctcctcccctccgcggccacgagggacgatgcgctcgcctccctcgtcggccagctcgagcacgacgtcgtcgttcgccacggacaagcggcggaggaggaggaggaggaggaggaggatgaggagctgtatcaccacgatagccaggacctcggggcggcgcggaggcgccatcaccggcagcaccaccaggacgggcacgagctggcggcgcggtggcgggagatccacgggcgcgacgactgggcggggctgctcgacccgatggacccgctgctccgctcggagctcatccgctacggcgagttcgcgcaggcgtgctacgacgccttcgactacgacccgtcctcccgctactgcggcagctgcaagtacccgcgccgcgccttcttcgaccgcctcggcatgcccgccgccgcgcggggctacaccgtgacccgctacctctacgccacctccaacttccgcttcccaaacttcttctcgcagtcgcgcgcgggtgccaagatctggagccagcgcgccaactggatcggctacgtcgccgtctccaccgacgaggagaccgcgcgcctgggccggcgcgacatcgccatcgcgtggcgcggcacggtcacgcgcctcgagtgggtctccgacctcatggacttcctccgccccgtcgccgacgagggcatcccgtgcccggaccgggaggtgaaggtggagtccggcttcgtggacctctacaccgacaaggaccccacctgccgcttctgcaagtactccgcgcgcgagcaggtgctcacggaggtccgccgcctcgtcacccgctacgccgcgctcggcgaggacgtgagcgtgacggtgacggggcacagcctcggcagcgcgctggcgatgatcagcgcgtacgacatcgcggagtcgggcgccgcgagcgcggcgcacggcggcgggaaggaggcggcggcggcggtgtgcgtgtactcgttcgcggggccgagggtggggaacgcgaggttcaaggagaggttcgagggggagctcggggtgaaggcgctgcgggtggtgaacgtgcacgacggggtggcgcggatgccggggatcctgctgaacgagggggcgccggcggcgctgcggcgggtggcggagggcatcctccgggtgccgtggtgctacgcgcacgtcggcgtggagctcgcgctcgaccacaagcggtcgccgttcctcaaggacacgctcgacccggcctgcttccacaacctcgaggcgcacctccacctcctcgacgggtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0390000, RefSeq:Os05g0390000