Os05g0391050

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Revision as of 10:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0391050| Description = Conserved hypothetical protein| Version = NM_001187479.1 GI:297724088 GeneID:9269714| Length = 6537 bp| Definition ...")
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Gene Name

Os05g0391050

Description

Conserved hypothetical protein

Version

NM_001187479.1 GI:297724088 GeneID:9269714

Length

6537 bp

Definition

Oryza sativa Japonica Group Os05g0391050, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18977153..18983689

Sequence Coding Region

18977153..18977571,18980923..18981317,18983125..18983200,18983351..18983467,18983514..18983525
,18983548..18983689

Expression

GEO Profiles:Os05g0391050

Genome Context

<gbrowseImage1> name=NC_008398:18977153..18983689 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:18977153..18983689 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggggaccgccgccgctgccggcgaagggggccactgccattgctgggagaaggggccgctgccgctgccggaagaagggggccgccgtcgctgcaaggataagggggccaccgttgatgcctccttacagccgctgccgctgccggaagaaggggctgctgccgctgcaaggagaagggggccgccgccgctgcctccttgtggccgctgccgctgccggaagaaggggccaccgccgcttcaaagagaaggggaccgcctccgttggagaaggggccgcctccgttggagaagaggccgccgccacccccgccgccagcgcgttgctgctaggagaaggaggaggcgagagagggcgagaggggaggggggtgcaagtggatggagtgagaagtgtgaggagcgagtggatgaggctcgtggaggagcctgcgcttagcttaagtgtgttagaacccgatgttggtgttggcggcggcagtggtggtggtggtggtggtggtgaaggtgataatggtggtgttttctttgtttctcctgctggggtcgtggaacaagttggggaactagctaggtctcctgttcttgatgtcccatatgttgctattgacattgttgattgggaaagcctagacattctggcccgaaacgacgatgaagggcggttagatattgttggggacgacaaattctatgagttgctgggtttaagggctgaagatgagcaagccgagatggctagacaagctggtggcaatgggggtcaggctgctggtggtgatggggctgaagctgctgctgctggtgatggtggcaaatctaaatccaaagctagtacatccaatactgagccaggaaagaaggtgttggtaaggggcaagagaaggaagaggaagccaagaagaaacactacaaaatatgggactagttctgatattcctagtcccaaaaggccttgtgtgcaacaaataattgaagagagcccaggaagagtcacaagaagagttacaataagccggctagcaatgctcatgatgggaggacaagcagccacaacttctcagccacaagcagccacaacttcaagtacccagcctactaacagctactcccagccaaggaggaagctgacgccaaagaagaagcttcaaatttga</cdnaseq>

Protein Sequence

<aaseq>MRGPPPLPAKGATAIAGRRGRCRCRKKGAAVAARIRGPPLMPPY SRCRCRKKGLLPLQGEGGRRRCLLVAAAAAGRRGHRRFKEKGTASVGEGAASVGEEAA ATPAASALLLGEGGGERGREGRGVQVDGVRSVRSEWMRLVEEPALSLSVLEPDVGVGG GSGGGGGGGEGDNGGVFFVSPAGVVEQVGELARSPVLDVPYVAIDIVDWESLDILARN DDEGRLDIVGDDKFYELLGLRAEDEQAEMARQAGGNGGQAAGGDGAEAAAAGDGGKSK SKASTSNTEPGKKVLVRGKRRKRKPRRNTTKYGTSSDIPSPKRPCVQQIIEESPGRVT RRVTISRLAMLMMGGQAATTSQPQAATTSSTQPTNSYSQPRRKLTPKKKLQI</aaseq>

Gene Sequence

<dnaseqindica>1..419#3771..4165#5973..6048#6199..6315#6362..6373#6396..6537#atgaggggaccgccgccgctgccggcgaagggggccactgccattgctgggagaaggggccgctgccgctgccggaagaagggggccgccgtcgctgcaaggataagggggccaccgttgatgcctccttacagccgctgccgctgccggaagaaggggctgctgccgctgcaaggagaagggggccgccgccgctgcctccttgtggccgctgccgctgccggaagaaggggccaccgccgcttcaaagagaaggggaccgcctccgttggagaaggggccgcctccgttggagaagaggccgccgccacccccgccgccagcgcgttgctgctaggagaaggaggaggcgagagagggcgagaggggaggggggtgcaagtggatggagtgagaagtgtgaggagcgagtggatgaggtagaatggccgcgatcgagagaagcgagtggataaggatgttgaccagtcggttttttattggtgacgttttctttaagtagaaccgacacctacatttatattataggtattggttcttttaaaaaaaccggcacctataacatttgtatcgggttttacgctaaaacagacacctataatatttgtaccagttttttgctagaaccaacacctataatataagtataggtgtcggttggtgtcggtttttcttgagaagcggcacttataatgcttaaaggtgtcatttttttattttattcatcgtgcgaaggttggaaaaggctcataggtgccggttttaaatgaaccggaacctataagaccagtctctatgagagtttttttataatgtaaataaacaatctaaatttcttatcacaaaaggacaaaagatctaatcgcaaaaagaccaccacaccctgtggttgcttcgcttcttccccttccgatctctttttctttttctttttttttctataaaataaacaaacaatttaaattcctaaaagtacaatgatctataataaataaaggatgaaaatatgtctcaccactcctgttcgtgttttatttcctcgtgatatcattttatctttatctttatctttacatatataaaatatttgtagtgtttctattattcgtcgttgtctaccgtacatcaacgattttcatgtttctgcactagcaccctagcagcgcgtgcgagtctgattgctcccaaactaaaaatcaccgcttccacgttgatggtcaagcatccccacgcgttagaatccattaggctccacacacagcacatcctatttgtcttcccacgccaatcacacaaccatcaatcatatcatgttttgcttctgctctatcggtaagtttacaatttgaacgatgtcaaaggattgccaactcgtgaattaggaaataaccgagtcattaatataataaaatatataatagtaacaagcctcataatccatatgacatgtggccataacaactaggaaatctaaattaaaaattaattaaagtaggtctactctttttaatattcacatggattcgttacgtgaactcgtgaacaaacaaacacctaatttgagaaatgatacatctgataatttaaataatatgttcttgagaaagtgcctggtgcctggcagcttgaagtggctattgacggtgacccatacactgacggaggccatgcaggtggtgtcggataggcctacgtgacatttaaggcggcggtgtagagtgtggagatactcgcaatgggaggcaaaatggttggtgtcgctgtgcattggtaaggcccaacagtggaagtggttcgatgaagatgaggaagcgatgtagttgaggagacgataggagtagaacatgagcccatgctttgatcgcacaagcacgaccatcatatgttcaatggatttctcaatcattgtgttgtaccgccaccacaagggatcagcatgtggtgcccaagcttttcactccaagaaattcctataatgcaggaagggcgaaagcagattttagtcaatccgcttattaaaaacaaaagtttccgaaaacccggtgaacatacacacaaacggagaaaacaaccatggaaaaaagttgaaacacagaaagaactgaaaacatactataatacagtggaacggaatgtttaacccctcttactagatcatgttgcaacgcacgggtatatttgctagtctaataataatttaggagataaatctagagcttaagtcttagctgccctagattatactaattaggtcgatcatatcgattccaagatggaaggatgatgaatggatgtattgtactccattaatttgtacaactggtacttgccatgggcgcttgtggcaactggcaaatgggaatgggatggtttgattggtttcacctcttggcggtttgcaggtcgatcttgacctgagctgcagcctgcaggaccggaggagatgtagatcgaggcttctcggacgatgaggacctgcctgactttaccctggcctttgactgcatgctccatgatatatctagcttaggcctagtttagttggcaaaattttttattttaagatatccacgtttatatggacacatatttaaaatgttaaatgttgtctaataacaaaacaaattacagatttcatcttggaaactgcgagacgaatttattaagcctaattaattcgttgttagcaaatgtttactgtagcaccatattgtcaaatcatggtgtaattagacttaaaagatttgtctcgcaatttacacgtaatctgtataattgatttttttatctatatttaatattttatgtatgtgtttaaacgtttaatgtgagaaggtgaaaagttttattttgagaactaaacagagccttagccggttcttccattctgcgggagaggagtacgcatgcattatactgatcagctttacgggatagtacattttactttgttcagatcgtgtgtatggctgtacatgtacagtaaggaaccagtagagaacatatgcacttggctgataagcaaactgctctaactcgaagctttggcttctctgccgcaggcgtgacactcgccgctcgatcgatatctctcgatgtatcgagcgccttcgtgtacagcttaattttaacagctgtaaatatatgcctggaccaggcacatcttttactggggtctcctgctacagagtaaaaccttttttctcctctgcaaatctctgcaaccacatcatggacaaaagcttctctctctctgatttttgtgtgtctcaggtgggagaaattggacattgtgccattcccaataagtggtttcgctggaatgccactccgctgaatcgattcgctaaaaaatcatccccaagcggtgcccaacattttctttgccacattcgccatttaatctcttttgctgctgttttcgcatttgggctgatgaaaatgcccttgtgctatgtttcttctatctgaggtgagagaaagcggattgagccgctattaggtctgagagagaaaggggatccccagatccagtcgctcctctgtcttggtcgtcgtcgccggcggtgccgtcgccatccaatggtgctagcgcgtgggaggtaggagcatagtggcattgatggattgcacctggcacgagttagtgtccgggtaagttcttctaccgatttgtggcttgcttttgtgattacgattggtttgaattagttagaggtgcgaatcagttagagagttctctaacattcgtccacatttgatttcttcaggctcgtggaggagcctgcgcttagcttaagtgtgttagaacccgatgttggtgttggcggcggcagtggtggtggtggtggtggtggtgaaggtgataatggtggtgttttctttgtttctcctgctggggtcgtggaacaagttggggaactagctaggtctcctgttcttgatgtcccatatgttgctattgacattgttgattgggaaagcctagacattctggcccgaaacgacgatgaagggcggttagatattgttggggacgacaaattctatgagttgctgggtttaagggctgaagatgagcaagccgagatggctagacaagctggtggcaatgggggtcaggctgctggtggtgatggggctgaagctgctgctgctggtgatggtgtgggtgatgctgctcaagacactactggggcagcaattcctgtgtctgatgaagtaccaggggagttggtgatgccctatgaccctgacaagccatgcatgaaggctggcaccatgtacccaaacatgaaggagtttaggttggctgtgaggcaatatgccataaatgaggaatttgagttgcatttgatcaaaacagatcctgaacgatatataggaggttgtatggttgatgactgcccttggcatattgttgggcataagcagcctaatcagaagacagtgatggtattattttttttcttttcagttagacagtagatgtgtcacacaatgcattaatgctgatagtttcttccatttgatttgcaggtgacagtgctaactgaccatcatacatgtacttctagcagcagaagaagaacaactacaccaactagtaaatgggtggttgcaaaggcaattccaattcttaggaagaatccaggtatgggtcctaaagccttgcagactaggctagtagaagatcaaaagtgcacaatcaactatgacacaatatgtaagggtagactcaaggctttggatcagctgtatggaacatgggaggaaagttttcacatgctgtataggtggagggcagaggtacttagaacatcacctagtagtgttatagagattgacattgtggaagtagataggagagttttttttaaaaggtttttctgtgcattaaggccttgtattgatggtttttttagaggggtgtaggccatacattagtatagacagcactgctttaaatggcagatggaatggccacttagcatctgctacagctgtagatgggcataattggatgtatcctctttctattgggtttatagatttagagactgaggataactgggagtggttcatgagtcagcttcatgctgccataggagatgttaaccctctagctgtatgcactgatgcatgtaaggggttggagaaggctgtgcacactgttttcaaacatactaagcagagggagtgcttttggcatttgatgaagaattttgtgaagaggtttggaggagatgtacactcacatatgtacccagctgctagggcatataggaaagaaatttggcaaatgcacatgaaggaggttattggttcttgcagtgaagttctcccttggcttgaaacctagtggatgaggagtggtttcaacccagagattaagtgtgattacataactaacaacattgtagaggttttcaacaactggattaaggactataaagcactaccaattggtgaccttgcagacaagtatagggtgctagttatggttctttggaataagaggaggaggattggagagaaattaactggcaagatcctgccagcagttacacaacaactgaaggctatgaataggggtttaggtcacctgtcagtagtgaaagccgattccttaactgcagaggttgttgataacagcagtagtaatggcaagcatgttgtgaaggcatacaataaatattgctcttgtgaggaatggcagcacactggaaaaccatgtcagcatgcattggcattgataacagcacaacagagcagagatgtcaacattgaggactttgtaaatccatattactcagtctaaatgttcaagaatgcctacaagagagttatagagccacttggtgacaagtcttactggccacaggttgagatgccatgggtgctaggtgcacctttacctaagaagacagcaggaagaaacaggatgcttaggatcaaaagttgtcttgaaggtggcaaatctaaatccaaagctagtacatccaatactgagccaggaaagaaggtgttggtaaggggcaagagaaggtgcaagggctgtggagaattgggacatactcagactagctacaagtgttcacttaatggaacaaagacaaggctagttcactaactcaaatgtcattgcattgagtattttttataacatgttacaataatttaccttgtaacttgcaggaagaggaagccaagaagaaacactacaaaatatgggactagttctgatattcctagtcccaaaaggccttgtgtgcaacaaataattgaagagagcccaggaagagtcacaagaaggtagcttcattgtcttttattaagtaccaatatttgcatattgcagagttacaataaggtaactttattattgcttgcagccggctagcaatgctcatgatgggaggacaagcagccacaacttctcagccacaagcagccacaacttcaagtacccagcctactaacagctactcccagccaaggaggaagctgacgccaaagaagaagcttcaaatttga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0391050, RefSeq:Os05g0391050