Os05g0392700

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Revision as of 10:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0392700| Description = Mitochondrial substrate carrier family protein| Version = NM_001061987.1 GI:115463704 GeneID:4338691| Length = 3942 ...")
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Gene Name

Os05g0392700

Description

Mitochondrial substrate carrier family protein

Version

NM_001061987.1 GI:115463704 GeneID:4338691

Length

3942 bp

Definition

Oryza sativa Japonica Group Os05g0392700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19115509..19119450

Sequence Coding Region

19115985..19116276,19116395..19116561,19117240..19117386,19117477..19117708,19119145..19119299

Expression

GEO Profiles:Os05g0392700

Genome Context

<gbrowseImage1> name=NC_008398:19115509..19119450 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19115509..19119450 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggggatggtgtggactgggagagcgtggcggaggccacgtccggggcggtgggcgcgctcgtcagcaccaccgtgctctacccgctcgacacctgcaagaccaagttccaggccgagctccagacgcagccgggcgcgcacaagtacaggaatctttcagatgtcttttgggaagctgttcagaaaagacaaattctatccctatatcagggccttaagacaaagaacatccaatctttcatttcacaattcgtttacttttatggctatagctactttaaaagactctacttggagaagagtggagcaaagtctatcggcacaaaagcgaacttgttagttgcagctgctgctggtgcttgcacagttgttgttactcagccactagatacagcatcttctagaatgcaaacaagtgcctttggaaagtccaaagggctgcgggcaactcttgccgaaggcacttggcttgaggcatttgatggcttgggaatttctcttatactaacgtgtaatccttctattcagtatactgtatttgatcagctcaagcagaagctaattcagagacagagacgtaaaaatgcagaagcagggggtggttcttcaccagttgctctttctgctttctcagcatttctccttggtgccatctcaaaaagtgttgctacaatattaacctacccactaatcaggtgcaaggtcatgattcaggctgcagaccctgatgaggatgatgacgatgaatctgaaaggccaggaaaatcaaaatctcccaaaacaatgttgggcgctttgcatgccatgtggagcaaggaaggcatcccaggcttcttcaaaggattacatgctcagatactcaagactgtcctgagttctgcattgctgctgatgataaaggagaagatttcaagatttacttggatttcactgcttgccctgcggcgatatctctttgtttctcagaagagaatcaagagtgcataa</cdnaseq>

Protein Sequence

<aaseq>MAGDGVDWESVAEATSGAVGALVSTTVLYPLDTCKTKFQAELQT QPGAHKYRNLSDVFWEAVQKRQILSLYQGLKTKNIQSFISQFVYFYGYSYFKRLYLEK SGAKSIGTKANLLVAAAAGACTVVVTQPLDTASSRMQTSAFGKSKGLRATLAEGTWLE AFDGLGISLILTCNPSIQYTVFDQLKQKLIQRQRRKNAEAGGGSSPVALSAFSAFLLG AISKSVATILTYPLIRCKVMIQAADPDEDDDDESERPGKSKSPKTMLGALHAMWSKEG IPGFFKGLHAQILKTVLSSALLLMIKEKISRFTWISLLALRRYLFVSQKRIKSA</aaseq>

Gene Sequence

<dnaseqindica>3175..3466#2890..3056#2065..2211#1743..1974#152..306#gctacttaccccgcgatttctcttcctcttattactcttcctctcggctctcgctcgctcgctccccgcgcgatttctccacgccgcacgccgctcgcgagttagggatcgatctcgtcgggggcgggcgggagagggagagggaggagagatggcgggggatggtgtggactgggagagcgtggcggaggccacgtccggggcggtgggcgcgctcgtcagcaccaccgtgctctacccgctcgacacctgcaagaccaagttccaggccgagctccagacgcagccgggcgcgcacaagtacaggtaagcagctcagccagcggctcctctctctctctctctctctctccctctcttcgccatgtggtggattgctgatccccttgtcaggagcttgctggggagatcgccgggttctcgatcgagaggcaggcgacccgtcggaattgggatctggctgctactgattcagtgtttgggctgatcgtgatgcactggtccgattgacgtggataacctggcgttagcggcggatgtcgtgatcttcgcataggccagttgataatttccctgggatagaactgtcgttgatttcttatttggtggccaaaggatgcagaaaaaccccagccatgtctcctttcgccagctttgttgttagaaggggggaaaggaactttagacctagtgtttgcattatatctctgaattaggctcacacttcacaaggagttcacttaatctggaatcgtatagtatgttggcactatgttgattggttggagattgtttggttcagctcccagttgcccaccaataggtgttggttatagaatggtttaaccaaataggaaggattatgcaccccacaaagagaaaaaaaaaagagagagaagggttatgcatatagagattttttttctgtggccaatcaatggactagtcatgaaaaagaaaaaaataatcagtgggtggaaataccttgtaattttttcctgaaccaaaggggtccaatacctgcttgtattgaaagccagagtttttcaggagataatatgaaagagaatagagttgggagcatctctggcactaaaagcaacatatagtacatattaggagacaccaccagattcaaagagaaattaccaaaagacaacagcagccagcatttagttcatgcaggttagttaggcatacagagcaggtcatagagcgctgaaaaattcaaatgatcttgaacctcaagtataccacaaaagctatatatttttattcaaggtcactaccctccacatcagtaggaagctcactaagaaataattttcatgcaaagatcttaatcttgagaggtattttgcctttccatattttgtttaccgatcgctccaccacaagatataagattgtagagggactttggcatgtacatgttatttttctcttccataacatccacctggatgatatggtccagttaattccttattcattaggttttgccagctaactctttgtagcatttgggatgtgcattgaccttgacattttcacatattggtacctcacttgattgcacctttatactcttaaaaaagttaaattgatttgggtgtcatgcatttttgccagcgtttgatgtatgtcctggcatccaggccttcatggtgttccatctcttctgaagttctgagttactctgtttcatacaataagtgacctcacgtgtttattttttccaggaatctttcagatgtcttttgggaagctgttcagaaaagacaaattctatccctatatcagggccttaagacaaagaacatccaatctttcatttcacaattcgtttacttttatggctatagctactttaaaagactctacttggagaagagtggagcaaagtctatcggcacaaaagcgaacttgttagttgcagctgctgctggtgcttgcacagttgttgttactcaggtaactaacgccataagtaattagctaccattcactgaaaatcgtttttacctgctgacctttatgtgttcatctctcctgtgttttcagccactagatacagcatcttctagaatgcaaacaagtgcctttggaaagtccaaagggctgcgggcaactcttgccgaaggcacttggcttgaggcatttgatggcttgggaatttctcttatactaacgtgtaatccttctattcaggtacaaaggttctgcattgttcaaattctctcttttttttgtatgtatagaaacatatgtactgagatgcttttaaaaatggcagttatacagtcatttatctgcaagctttagtgaaagtcacaaattcatttgtttgaaaaacacaggaaggggcaaaactattgtactgttgactggttgtgaactatactgtatttgcatataaatgaaatgcaactctcgtgccttttgacttaataattaagaatatcctgagctcaacaatggaggaactgcagaacttcatgtgtgagctgcttcaagtttgtttactagtagaattgagtatagctaactactactacaaaaatgatgtgtgggcctgcactaaactttcttcctatctgattcagttgtaaatgttattctagttctgtaattgaagaaacttcatttagttcaagtatcatgtatatattatctgcctaaaaattgcagacaagataacgtgttataaaaaaaacatttctaatataagatcacttcaatgacatggctgatgtctgtgtggaatttgtaacaaataagctctaagaaacacctagaactggatttcggacttattagcttcacttttattctttgcacgcaccaattgacaattattttatggttgccattacctgtctgttgcagtatactgtatttgatcagctcaagcagaagctaattcagagacagagacgtaaaaatgcagaagcagggggtggttcttcaccagttgctctttctgctttctcagcatttctccttggtgccatctcaaaaagtgttgctacaatattaacctacccactaatcaggtgaaccttcttttttctcagaagatgtacatctggacctttccacctgattttgcttgccaatgctacatataaattattatcaccatataaattatatgacatcattatcaaacaggtgcaaggtcatgattcaggctgcagaccctgatgaggatgatgacgatgaatctgaaaggccaggaaaatcaaaatctcccaaaacaatgttgggcgctttgcatgccatgtggagcaaggaaggcatcccaggcttcttcaaaggattacatgctcagatactcaagactgtcctgagttctgcattgctgctgatgataaaggagaagatttcaagatttacttggatttcactgcttgccctgcggcgatatctctttgtttctcagaagagaatcaagagtgcataacttttatcattatcccttcgtaaagaaaatgtaatccatgtggtattgcggtattttgagatcctgtaccaaagaataagtctcaggaataaggaacagatacagaaaagcaaaacatcacgtcatacatgtggggtctttttaatagcgtcagggaatgtttctgaataaattcgtttgtttcttcttttacccctgaatgtctacagctattgaaatgaaataggtgttccacagatcgaattagttgtagtgactacgtatagtatgtagcgtgtaaacatatcagttctgttcatattccttctttctttgctggaaatgaatcagttgcaataaatttatcttgtaatgtcagatgtctagtgtagagtactagagttctgccagaactcagcagccgaaggcattgtatgtgcaccaaaaaaaaaatgaaagatggtgtttacacttcttgcagttgcaggagtggtggt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0392700, RefSeq:Os05g0392700