Os05g0394900

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Revision as of 10:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0394900| Description = Conserved hypothetical protein| Version = NM_001061995.1 GI:115463720 GeneID:4338699| Length = 1417 bp| Definition ...")
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Gene Name

Os05g0394900

Description

Conserved hypothetical protein

Version

NM_001061995.1 GI:115463720 GeneID:4338699

Length

1417 bp

Definition

Oryza sativa Japonica Group Os05g0394900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19224081..19225497

Sequence Coding Region

19224205..19225099,19225175..19225221,19225316..19225495

Expression

GEO Profiles:Os05g0394900

Genome Context

<gbrowseImage1> name=NC_008398:19224081..19225497 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19224081..19225497 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgctatactcttcaaaacagatttgctgaagctgaagtggagactgtagcagctgagaagaagaaggttgaaagggaaacattggctgagaaaatgttgaatgaacaagaactcatacttgatgctacaaaggaaagatccaagatgctggaacagcaagtgcgggagaatgcaaagctgagggagttactaatggaccgaggccaaattgtggatgcattgcagggggaaatgctgggaatcttcgataaaatttcacaacttcaactcagggttgataagcaacttcctgaacccctgctatcaagcatgtcctcctcagtcaactcagctgataacattgcacagctccagtgcagagttgatgacccacagcattctgttgatgattcattgcaactagcttcacctagattgtccagctcattcaaatcaacagatagcactgcgcaagcccattgtagagttgatgagccacaaatttctgttgatgaatcgctgcttcctgttgacgagtgtgagcagctgaaactgattttaccaaggttatctagctcagtcatgtctgcacaatcccaatatagagttgatgaaccgctacttcctgttgatgaggtgttgcaactagcttcatcaagcttatccagttcgctcaaatcaggagataacatcgctcaacttttgggagtacttgatgtgcatttacctgttgatgagttactgcaactaccttcattgatcttatctagctcagtgaaatcatcagacagcattgcgcagttccaacaaaaggctgatgctgatgagatgctgcaatcatctagcttagccagctcagagaaaccagcaactttcaagaattggtcatctgcttcagacaccattacacagttccagcaaagggctaatgctgatgagtcgctgccgcttccttcatctagcttggccagctcagagaaaccagcaacattcaagagtacttggtcatctgctgcagaatcaaattcagttttcagtggtgatgaagagattgatgatgcttccttccatgacagtattgatttggatgatagctgggatttagttgacgatgaagccatctatatgtgtgctaactag</cdnaseq>

Protein Sequence

<aaseq>MRYTLQNRFAEAEVETVAAEKKKVERETLAEKMLNEQELILDAT KERSKMLEQQVRENAKLRELLMDRGQIVDALQGEMLGIFDKISQLQLRVDKQLPEPLL SSMSSSVNSADNIAQLQCRVDDPQHSVDDSLQLASPRLSSSFKSTDSTAQAHCRVDEP QISVDESLLPVDECEQLKLILPRLSSSVMSAQSQYRVDEPLLPVDEVLQLASSSLSSS LKSGDNIAQLLGVLDVHLPVDELLQLPSLILSSSVKSSDSIAQFQQKADADEMLQSSS LASSEKPATFKNWSSASDTITQFQQRANADESLPLPSSSLASSEKPATFKSTWSSAAE SNSVFSGDEEIDDASFHDSIDLDDSWDLVDDEAIYMCAN</aaseq>

Gene Sequence

<dnaseqindica>399..1293#277..323#3..182#agatgcgctatactcttcaaaacagatttgctgaagctgaagtggagactgtagcagctgagaagaagaaggttgaaagggaaacattggctgagaaaatgttgaatgaacaagaactcatacttgatgctacaaaggaaagatccaagatgctggaacagcaagtgcgggagaatgcaaaggtaacgacaagttgtgtacatgaaagatggatatcaagtgcaatattttggattcatgttttagcaaacaactaacttgcataatatgatgcagctgagggagttactaatggaccgaggccaaattgtggatgcattgcagtaagttttatggcaagtttaatacattttttttgttagacgtgcacatctcatactccaccttgtatgttttaggggggaaatgctgggaatcttcgataaaatttcacaacttcaactcagggttgataagcaacttcctgaacccctgctatcaagcatgtcctcctcagtcaactcagctgataacattgcacagctccagtgcagagttgatgacccacagcattctgttgatgattcattgcaactagcttcacctagattgtccagctcattcaaatcaacagatagcactgcgcaagcccattgtagagttgatgagccacaaatttctgttgatgaatcgctgcttcctgttgacgagtgtgagcagctgaaactgattttaccaaggttatctagctcagtcatgtctgcacaatcccaatatagagttgatgaaccgctacttcctgttgatgaggtgttgcaactagcttcatcaagcttatccagttcgctcaaatcaggagataacatcgctcaacttttgggagtacttgatgtgcatttacctgttgatgagttactgcaactaccttcattgatcttatctagctcagtgaaatcatcagacagcattgcgcagttccaacaaaaggctgatgctgatgagatgctgcaatcatctagcttagccagctcagagaaaccagcaactttcaagaattggtcatctgcttcagacaccattacacagttccagcaaagggctaatgctgatgagtcgctgccgcttccttcatctagcttggccagctcagagaaaccagcaacattcaagagtacttggtcatctgctgcagaatcaaattcagttttcagtggtgatgaagagattgatgatgcttccttccatgacagtattgatttggatgatagctgggatttagttgacgatgaagccatctatatgtgtgctaactagccgtatgaatactacacatatggtgctgaattcgtgaatggcgtgttttataagaagtaaaaccaaatctaggatcttgctatgaacttggtccttcttattatttgaattcgcaaatctgctt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0394900, RefSeq:Os05g0394900