Os05g0395000
| Gene Name |
Os05g0395000 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001061996.1 GI:115463722 GeneID:4338700 |
| Length |
2203 bp |
| Definition |
Oryza sativa Japonica Group Os05g0395000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:19228935..19231137 |
| Sequence Coding Region |
19229243..19231081 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:19228935..19231137 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:19228935..19231137 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgccgccgctctatctcctcctcctcctcccgctcctcgcctgcgccgacgaggtccctgaccgctacgccgtcctccgcgccccgcagggcccgggtgccagcgcggcggccaaggagtacctcgacccgaccttcccgctccccgcgcccccgccggcggcgccgtcctgcaccgtgccggtcctctcctactccttcggcgacacctacggcgccgcgccggccaaggcctcgtacgcgccccccgccgggtgccccgcgccctggtccctcgtcgtgctcaccttctccgcctcctgcgccggcgaccagtacgaccgcgtcgccgccgtctggctcgacggcgccgagctcctccggaccaccaccgcggagccgacccccgagggcgtccgctggaccgtccgcaaggatgtcacccgctactccgcgctcctccgctccccgcccggcggcgtcctctccgtcatgctcgagaacgtcgtcaacgacaagtacaccggggtgtacagcgtcaacgtctcgctggagttccatggaactccgccgtacctctccgacgcggcatcatcctcccctgctggcgtcgcaagcaacgatcccaaggaacctatgctgccggagtcatacttccagccggcggatctcatcgtcccgatctcggatgtcgccggcaacggcaagggcgggttctggttccgcatccagaacgcgtcggactcgcactccaggctcgtaaccattccgtcgagcacctaccgtgcggtgctcgaggtgttcgtgtcccctcactccaacgacgagtactggtactccaacccgccggacatctacatcagggagaacaacctcaccacgcggaggggcaacgcggcgtaccgcgaggtcgtcgtcagcgtggaccaccgcttcgtcggctcgttcgtgccgttcccggtcatctacacgggcggcatcaacccgctcttctggcagccggtggccgcgctcggcgcgttcgacctgcccacctacgacgtcgagctcaccccattcctcggcctcctggtcgacagcaacgcccacgagatcggcctcagcgtgttcgacggcatcgccgagtggctcgtcgacgccaacctgcacctctggctggaccccagcacgtcggacgtgcacgccgcgctcggcgcgtaccagacgccgcgcctgaaaatctcacgccactactcgacgcggctgctcgagggcaggttcaagatcaaggccaagaggaagtcctccttcagcggctgggtcaagtcctcgttcggcaacttcaccacggaggtggaggcggagctgaaggcgaccagcctggtggagttcaccggcgacggccggaacaagaccgtgtcgctggaggcgaagcaggagacgaagacgctgatccgggcgggcgacacgcggaaggtgatcggcagggtggagagggaggccaagtacccgctgtcgctcttcgcggagaccgaggacggcgagaacggcacgtccgtcgtcacggtgagcctcacccacggcctcagcgtggagacggaggtcgagacgaaggccctcgagagcaaggagaagctcgatgacgcgcaggccgcgcaagggtggatggtgctcctggaccacgacgtgctcaacgggtcggtgacgacgacccaggcgtaccggttcagcgacgacgagcgggagtacgagcgggcgatcgacgtcgtggacggcgccgtgctcagcgacaacgtcaccgagagcttcagcgccctggccgccgcagcggcggacgctcgccgccgccggttccacgccggcattgctgcgttgtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAPPLYLLLLLPLLACADEVPDRYAVLRAPQGPGASAAAKEYLD PTFPLPAPPPAAPSCTVPVLSYSFGDTYGAAPAKASYAPPAGCPAPWSLVVLTFSASC AGDQYDRVAAVWLDGAELLRTTTAEPTPEGVRWTVRKDVTRYSALLRSPPGGVLSVML ENVVNDKYTGVYSVNVSLEFHGTPPYLSDAASSSPAGVASNDPKEPMLPESYFQPADL IVPISDVAGNGKGGFWFRIQNASDSHSRLVTIPSSTYRAVLEVFVSPHSNDEYWYSNP PDIYIRENNLTTRRGNAAYREVVVSVDHRFVGSFVPFPVIYTGGINPLFWQPVAALGA FDLPTYDVELTPFLGLLVDSNAHEIGLSVFDGIAEWLVDANLHLWLDPSTSDVHAALG AYQTPRLKISRHYSTRLLEGRFKIKAKRKSSFSGWVKSSFGNFTTEVEAELKATSLVE FTGDGRNKTVSLEAKQETKTLIRAGDTRKVIGRVEREAKYPLSLFAETEDGENGTSVV TVSLTHGLSVETEVETKALESKEKLDDAQAAQGWMVLLDHDVLNGSVTTTQAYRFSDD EREYERAIDVVDGAVLSDNVTESFSALAAAAADARRRRFHAGIAAL</aaseq> |
| Gene Sequence |
<dnaseqindica>57..1895#actactccggagcagcgaccaacaccaactacctcgcgtcgcggcggccgcagaggatggcgccgccgctctatctcctcctcctcctcccgctcctcgcctgcgccgacgaggtccctgaccgctacgccgtcctccgcgccccgcagggcccgggtgccagcgcggcggccaaggagtacctcgacccgaccttcccgctccccgcgcccccgccggcggcgccgtcctgcaccgtgccggtcctctcctactccttcggcgacacctacggcgccgcgccggccaaggcctcgtacgcgccccccgccgggtgccccgcgccctggtccctcgtcgtgctcaccttctccgcctcctgcgccggcgaccagtacgaccgcgtcgccgccgtctggctcgacggcgccgagctcctccggaccaccaccgcggagccgacccccgagggcgtccgctggaccgtccgcaaggatgtcacccgctactccgcgctcctccgctccccgcccggcggcgtcctctccgtcatgctcgagaacgtcgtcaacgacaagtacaccggggtgtacagcgtcaacgtctcgctggagttccatggaactccgccgtacctctccgacgcggcatcatcctcccctgctggcgtcgcaagcaacgatcccaaggaacctatgctgccggagtcatacttccagccggcggatctcatcgtcccgatctcggatgtcgccggcaacggcaagggcgggttctggttccgcatccagaacgcgtcggactcgcactccaggctcgtaaccattccgtcgagcacctaccgtgcggtgctcgaggtgttcgtgtcccctcactccaacgacgagtactggtactccaacccgccggacatctacatcagggagaacaacctcaccacgcggaggggcaacgcggcgtaccgcgaggtcgtcgtcagcgtggaccaccgcttcgtcggctcgttcgtgccgttcccggtcatctacacgggcggcatcaacccgctcttctggcagccggtggccgcgctcggcgcgttcgacctgcccacctacgacgtcgagctcaccccattcctcggcctcctggtcgacagcaacgcccacgagatcggcctcagcgtgttcgacggcatcgccgagtggctcgtcgacgccaacctgcacctctggctggaccccagcacgtcggacgtgcacgccgcgctcggcgcgtaccagacgccgcgcctgaaaatctcacgccactactcgacgcggctgctcgagggcaggttcaagatcaaggccaagaggaagtcctccttcagcggctgggtcaagtcctcgttcggcaacttcaccacggaggtggaggcggagctgaaggcgaccagcctggtggagttcaccggcgacggccggaacaagaccgtgtcgctggaggcgaagcaggagacgaagacgctgatccgggcgggcgacacgcggaaggtgatcggcagggtggagagggaggccaagtacccgctgtcgctcttcgcggagaccgaggacggcgagaacggcacgtccgtcgtcacggtgagcctcacccacggcctcagcgtggagacggaggtcgagacgaaggccctcgagagcaaggagaagctcgatgacgcgcaggccgcgcaagggtggatggtgctcctggaccacgacgtgctcaacgggtcggtgacgacgacccaggcgtaccggttcagcgacgacgagcgggagtacgagcgggcgatcgacgtcgtggacggcgccgtgctcagcgacaacgtcaccgagagcttcagcgccctggccgccgcagcggcggacgctcgccgccgccggttccacgccggcattgctgcgttgtaaggctaccttggattgccgtgggagttgagctgtttcgtgtcatcgatggctacggaatccaggtgaaattcgtcagttcgaagaattcttatgtgcaggattcgtttccgaccgcatcgacgtgaccaagactattgcttttcttcagaggtaaattgtgcactgtaatttgtatttagcgtatagtttctgtaatctgtattatgtatgcaattttgtcggtgtgaatcgtcgtttctgcttttgcagttcaaattttggttgtgtttgtcttaataaaaacgaaataaagctggaaattgcagatt</dnaseqindica> |
| External Link(s) |
