Os05g0396900

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Revision as of 10:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0396900| Description = Conserved hypothetical protein| Version = NM_001062000.1 GI:115463730 GeneID:4338704| Length = 2204 bp| Definition ...")
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Gene Name

Os05g0396900

Description

Conserved hypothetical protein

Version

NM_001062000.1 GI:115463730 GeneID:4338704

Length

2204 bp

Definition

Oryza sativa Japonica Group Os05g0396900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19318207..19320410

Sequence Coding Region

19318543..19320348

Expression

GEO Profiles:Os05g0396900

Genome Context

<gbrowseImage1> name=NC_008398:19318207..19320410 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19318207..19320410 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggcgcaccacccgccgcacggcatcgccgccggggacgccaggaaggcccaccacctcggcggcgaccccaagaacctgtcgtggtgcggcgtcggcgtcggcgaccaccatttcctccccaggaagctcgtcgggggcggcggcccctccgcggcgaagctcgcgctcgtgtccttcctcgctgtcatcctcgtcctcgccgtcgacctgtccctcaccggcgccggggcgaaccggcggctgcggctccaatacctgcattacatcggcgacggcggcgggggtggcggtggtggcggggttggtggcggtggcgaagaggccaagaacaacgagcttccttggctctcagtgccggacccgtccaacttcacggaggagctcatcgaccggtggctgacgcccggggggactccgtgccgcgactcccgtacggcgaacatctccatccctgttcttgacgacgccgcggcggcgggcgaggtgaccacgctgggctccgccgagatccacgagttcacgttctgggcgctcgacgacgccggccagcggcgctgccttggcggggacttcttcgagatcgatctcgccggggacgagtggaagtcgcggccccccgtcgtggaccacggcgatggctcctactccttccgcctccaggtcgcgccgcgcttcgccgagggggatttccgcctcaccatcatcctcctgttccgcagcttcgagggcctcaagttctcctccctgaggttcaagtaccacgccgagatgcgccggattcccctcctgttcgggccgagcaactccacgcgcttcctcccggcattggagacctgccgcgccgcggacttcgcgcgcgacgtgtggtccggccgctggacgcgcctcgccaagaacgacagctgcgaggaggtggacgacgccggcaggtaccggtgcctggagccgcagcacccatgcgaggcgccatggtgcgcggggccactgggcgcgctggagagcaacgggtgggtctactcggcgcactgctcgttcagcctcttcacggccgacgcggcgtggcggtgcctggacggcaagtggctcttcttctggggcgactccaaccacgtcgacaccatccgcaacctcctgaccttcgtcctcggcgtcacgaacacgtccgccgtgacgcgccggttcgacgccgcgttcacgaaccccagtggcgggccggggactgtgaggatcacgagcattttcaatggccactggaacatgagcatgaactatcttggtctgcattccctccggaacaaggggttccagcgtcttgtccgttcatacttcttggctgaggaccgtgccccggacattgtcatcctcaactctggcctgcacgacgggtgctactggaccagcgtccgcgcatatgtgcaggctgctgagtatgctgcacaattctgggctggagttatggctgaagtgcggtcgcgtgggcatgccgtgccgaggatgttctaccgaacgaccatcgcgaccggcgggtatgctcgggacctggcattcaatcctagcaagatggaggcgttcaatggggtgctcgtcgagaagttgaggcgtcatggggtgctcactggtgggttgatcgacaacttcgatatgaccttcccatggcactatgacaatcgttgcaatgatggtgttcactatgggcgtgcaccggcgaagttgttatggcgggatggcaaggtcgggcaccagtatttcgtggacctcatgctggggcatgtgctcctcaatgccatctgcaatggatga</cdnaseq>

Protein Sequence

<aaseq>MSAHHPPHGIAAGDARKAHHLGGDPKNLSWCGVGVGDHHFLPRK LVGGGGPSAAKLALVSFLAVILVLAVDLSLTGAGANRRLRLQYLHYIGDGGGGGGGGG VGGGGEEAKNNELPWLSVPDPSNFTEELIDRWLTPGGTPCRDSRTANISIPVLDDAAA AGEVTTLGSAEIHEFTFWALDDAGQRRCLGGDFFEIDLAGDEWKSRPPVVDHGDGSYS FRLQVAPRFAEGDFRLTIILLFRSFEGLKFSSLRFKYHAEMRRIPLLFGPSNSTRFLP ALETCRAADFARDVWSGRWTRLAKNDSCEEVDDAGRYRCLEPQHPCEAPWCAGPLGAL ESNGWVYSAHCSFSLFTADAAWRCLDGKWLFFWGDSNHVDTIRNLLTFVLGVTNTSAV TRRFDAAFTNPSGGPGTVRITSIFNGHWNMSMNYLGLHSLRNKGFQRLVRSYFLAEDR APDIVILNSGLHDGCYWTSVRAYVQAAEYAAQFWAGVMAEVRSRGHAVPRMFYRTTIA TGGYARDLAFNPSKMEAFNGVLVEKLRRHGVLTGGLIDNFDMTFPWHYDNRCNDGVHY GRAPAKLLWRDGKVGHQYFVDLMLGHVLLNAICNG</aaseq>

Gene Sequence

<dnaseqindica>63..1868#ggatgcgaggccacgccacgggtcccgagtagggaacccccccttccacgccccccccggcaatgtcggcgcaccacccgccgcacggcatcgccgccggggacgccaggaaggcccaccacctcggcggcgaccccaagaacctgtcgtggtgcggcgtcggcgtcggcgaccaccatttcctccccaggaagctcgtcgggggcggcggcccctccgcggcgaagctcgcgctcgtgtccttcctcgctgtcatcctcgtcctcgccgtcgacctgtccctcaccggcgccggggcgaaccggcggctgcggctccaatacctgcattacatcggcgacggcggcgggggtggcggtggtggcggggttggtggcggtggcgaagaggccaagaacaacgagcttccttggctctcagtgccggacccgtccaacttcacggaggagctcatcgaccggtggctgacgcccggggggactccgtgccgcgactcccgtacggcgaacatctccatccctgttcttgacgacgccgcggcggcgggcgaggtgaccacgctgggctccgccgagatccacgagttcacgttctgggcgctcgacgacgccggccagcggcgctgccttggcggggacttcttcgagatcgatctcgccggggacgagtggaagtcgcggccccccgtcgtggaccacggcgatggctcctactccttccgcctccaggtcgcgccgcgcttcgccgagggggatttccgcctcaccatcatcctcctgttccgcagcttcgagggcctcaagttctcctccctgaggttcaagtaccacgccgagatgcgccggattcccctcctgttcgggccgagcaactccacgcgcttcctcccggcattggagacctgccgcgccgcggacttcgcgcgcgacgtgtggtccggccgctggacgcgcctcgccaagaacgacagctgcgaggaggtggacgacgccggcaggtaccggtgcctggagccgcagcacccatgcgaggcgccatggtgcgcggggccactgggcgcgctggagagcaacgggtgggtctactcggcgcactgctcgttcagcctcttcacggccgacgcggcgtggcggtgcctggacggcaagtggctcttcttctggggcgactccaaccacgtcgacaccatccgcaacctcctgaccttcgtcctcggcgtcacgaacacgtccgccgtgacgcgccggttcgacgccgcgttcacgaaccccagtggcgggccggggactgtgaggatcacgagcattttcaatggccactggaacatgagcatgaactatcttggtctgcattccctccggaacaaggggttccagcgtcttgtccgttcatacttcttggctgaggaccgtgccccggacattgtcatcctcaactctggcctgcacgacgggtgctactggaccagcgtccgcgcatatgtgcaggctgctgagtatgctgcacaattctgggctggagttatggctgaagtgcggtcgcgtgggcatgccgtgccgaggatgttctaccgaacgaccatcgcgaccggcgggtatgctcgggacctggcattcaatcctagcaagatggaggcgttcaatggggtgctcgtcgagaagttgaggcgtcatggggtgctcactggtgggttgatcgacaacttcgatatgaccttcccatggcactatgacaatcgttgcaatgatggtgttcactatgggcgtgcaccggcgaagttgttatggcgggatggcaaggtcgggcaccagtatttcgtggacctcatgctggggcatgtgctcctcaatgccatctgcaatggatgaaggttcttgcttccatgctcagtaagtttgtgcggctcaatcgtgtacactagagtaggatcctcagggaattgaatttgcttagatgaaattactggcattgaatcaattccagttcctgatatcatgtgtacatcggatatgggggtggggccttagctgaagcatgtatagtgagacatctgatctttcggctatgttgttggttgggatttactctagtgggcgaggaagatcgagttcgatcggagctagctatgagtgaaaatcaggtacatgtaaatacataccaaggctgcttgaggaggcttaatggatatacgaatttagtaggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0396900, RefSeq:Os05g0396900