Os07g0452500

From RiceWiki
Revision as of 20:35, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0452500

Description

ORMDL family protein

Version

NM_001066086.1 GI:115471904 GeneID:4343133

Length

2534 bp

Definition

Oryza sativa Japonica Group Os07g0452500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16262186..16264719

Sequence Coding Region

16262515..16262653,16263311..16263462,16264400..16264603

Expression

GEO Profiles:Os07g0452500

Genome Context

<gbrowseImage1> name=NC_008400:16262186..16264719 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:16262186..16264719 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcggagggcggggtcctacccctactacgtggaggcggcgccgccggtggacgtgaacaagaacacggagtggttcatgtaccccggggtgtggaccacctacatcctcctcctcttcttcgcctggctgctcgtcctctccgtctccgcctgctcccccgggatcgcgtggaccgtcgtcaacctcgcccacttcgccatcacttatcacttcttccattggaagaagggaactccatttgctgctgatgaccaaggcatctacaacagactaacttggtgggaacaaattgataacgggcagcaacttactcgtaataggaagttcttgactgtggtacctgtggtgctgtacctgatcgcgtcacacttgaccgactacaaacagccaatgcttttcctcaacaccattgcagttctggtactagtggtagcaaagctgccaaacatgcacaaggtccgtatatttggaatcaatgcagatatctga</cdnaseq>

Protein Sequence

<aaseq>MGRRAGSYPYYVEAAPPVDVNKNTEWFMYPGVWTTYILLLFFAW LLVLSVSACSPGIAWTVVNLAHFAITYHFFHWKKGTPFAADDQGIYNRLTWWEQIDNG QQLTRNRKFLTVVPVVLYLIASHLTDYKQPMLFLNTIAVLVLVVAKLPNMHKVRIFGI NADI</aaseq>

Gene Sequence

<dnaseqindica>2067..2205#1258..1409#117..320#atcatcacaccatcacgagcaccaccaccactcaccacgcgccacccacccccgcaccgcacgccaagatccgaccgccgccgccgccgccgccggagtagggagagggagaggagatggggcggagggcggggtcctacccctactacgtggaggcggcgccgccggtggacgtgaacaagaacacggagtggttcatgtaccccggggtgtggaccacctacatcctcctcctcttcttcgcctggctgctcgtcctctccgtctccgcctgctcccccgggatcgcgtggaccgtcgtcaacctcgcccacttcgccgtacgtcccgcctcgccccccgattcattcatccatccatccattcattgacggcgagtttgctccttctttcattagtccgatccgttcttgattagcgccgctagctagtcctatcctgtcgcgtgttggtctcacgcacccgatctgagagtcgcttctgctgctgttcttctttggtactatctttgatgagatacagtggcggaaggaatcgaggaacacaccaacttgcggagataatttttctcttcttcacaaatatctttttctcaaagaagcgtcgatttcgcaagctgaaatatcagggaataatcttccttacctttttctctgctagtttgtctcaagtatattccaaccttgcaaaagtcaaaagagatttcttggtgtatgtacaatctgttcaggttgaactcaagtccaactacgccttcagtctaaaacaactagcagtgagttgatgcaagaatctgttcactgttcacatcattgcgctaaaaaaaatgttaaatgttaaatccagattatgttatgcgtcgtgctttatttgtggacttgcatacgtttcttgattgtcctaattgacaaacgttgcattgatagaattatgggttgacaattgtcatatgttctttgtcatactgggtggttgtgtgtggcaaatggtttgttgggctggatatgtgcttgaacaaatttctctatgtaacgaagcaaagtaattttaaggccatcagcagcaagctgccaagcacacattatgttggagttgatttaatctaccattttctttctccctttaacacaataaaacattgcttctatatctgtaagagggcttgagttagatgtctacaatttgtagtcctcaacattcagctactagtactacatactgtatttaagtaaattttattttaattttttttggcagatcacttatcacttcttccattggaagaagggaactccatttgctgctgatgaccaaggcatctacaacagactaacttggtgggaacaaattgataacgggcagcaacttactcgtaataggaagttcttgactgtggtacctgtggtgctgtaagttccatttccatttcaacctaatgtacttcatcatgggattttgttgtagttgtagaaagaactcaaaatgtataattgttgttacaataagtatttctggggtggaagcatcgtccattgtgaaggaatttattttcctgcctttttttttgtgtgaaacgtggacaggaaggctgtctggatgattaacaaacaagggttcattttcctgctcttaagactattgtttgtttagttccataaggctagaacttattctgattaggattgtgcatgtttatttgcattgcacttaaatggaaagtttgattcatataactgatgtgatcggaagttgcatatcaatgttacttgcttttcacgttattctgttagttccagagtaagttaagaaagggttgtcatcatgatcgagcatcttctgacttaggagaaagtagattagcttcttttttgttgaagtcgctttctggaattctggtactattttcaggcaatggccttctgttaagatcatggatatcctattagtaatatctgttctttgcattagttgattctcctatgatgcttttaactctcaggccaacagagatgctctttttttcttgaatggcatgttctaagatatgctcatacactttgttgcaggtacctgatcgcgtcacacttgaccgactacaaacagccaatgcttttcctcaacaccattgcagttctggtactagtggtagcaaagctgccaaacatgcacaaggtccgtatatttggaatcaatgcagatatctgaggaccatatgaagaacatcagggcacaagcttctgtgtgtttgcaacgagggacaagcgaactttgtgcaaacacggtatctaaagtagtgaaaaaactaaactttttcaccactgcaatctgtagtatgtgcataggtgtaggaagaacctgtaaatgttactgtagcttataatttgcctacaggttggaggctgctgcatgtttgctcatgccacttcctttaagaactctagtggagagtgtagactgtaacttaaataaacatgtaatcttgtggatatggaaagtttggtggttgttaaaatggtgaaccggagttcagttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0452500, RefSeq:Os07g0452500