Os07g0456700
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os07g0456700 |
|---|---|
| Description |
Similar to (1,4)-beta-xylan endohydrolase (EC 3.2.1.8) |
| Version |
NM_001066096.1 GI:115471924 GeneID:4343146 |
| Length |
5675 bp |
| Definition |
Oryza sativa Japonica Group Os07g0456700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:16544515..16550189 |
| Sequence Coding Region |
16544839..16544946,16545500..16545864,16545940..16546081,16546429..16546793,16546871..16547030 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:16544515..16550189 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:16544515..16550189 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaggaggcgctgggggtgcctctcctccctgtgccgccctcgccggggtggacgcgcggcggcggccccgctcccgcagccagatccaccgcgtctcgagtccaaggaagtagaggagcacggcgcttccgataaagttgtcatggagaacattctgtcaaacaatgatttttcggaaggtctacatttgtggcatcctaatggttgccatggatttgtggctgttgaaggatcaggttatcatcatggaataaggcctcactcagggtcaaattatgccgtacttactcgtcgcacacataattggcaagggcttgagcaggacataacagaaaaggtcactgttggtactgagtacattgttgctgcccatgtcagagtccatggtgaactcaatgagcctgttggaattcaggccactctaaaacttgagggcgatggttcttctacgaactatcaatcagttgcaaggatctcagcatcaaaagactgttgggagaagttggaaggttcatttgaactaaaaactctaccaagacgtttggtattctacattgaaggcccccctcctggtgtagacttgctcatagattcagtcaccatctcctacaagaaaacagagcgggctgcatccaaactggttagtggaacagaaaacatcatttcaaattatgatttttcggaaggccttcatttgtggaaccctatctgctgtcatgcatatgtggcatctcaatggtctggtttccttgatggtattagagggagctcaggagaaaattatgctgtagtttcgaagagaactgaaagctggcaaggtcttgaacaagatattacagataaagtatctgctggtactgcttatgcagtatcagcctatgttagagttgatgggaatatccatacgaaagttgaagttaaagcaaccttgaggttgcataacacagatgattcaacgcactacagtccagttggaagcctgttagcttcaaaagaaaagtgggagaagatggaaggatccttttgcttgacaaatatgccaaaacgtgtagtattctacctggaaggacctcctgctggcgtggaccttatcattgattccgtaaatgtaacttgctctggatatcagcagttaaaagaagtaaaagtaccaagtggagttgataccatcgttaagaatcctcactttgacgaagggttaaacaattggtctggaagaggatgcaatatctgtaggcatgagcttactgcttatggaaatgtcaagcctctaaatggcagctattttgcttcagccactggacgggtccacaattggaacggtatccagcaagatatcactggcagggtacagagaaaagttctttatgagataagttctgctgtccgcatatttgggagtgccaatgatacagaagtctgcgttactctgtgggtacaagaatatggccgtgagcgatatgtaagccttgcaaagaacccggcatctgataagcaatggacacatctaaaaggaaagttcctcctccatgccccgttttcaaaagctgttattttcgtagaggggccacctgcaggcattgatattcttgttgatggccttgtcctatctccagcaagaaaactccatgctgcaccccgcccaagaattgagaatgtttcatatggagctaatgtaatacataacagtgctttcagtcatgggctttctgggtggagtcccatggggtcatgtcgattgagtatccatactgaatcaccccatatgctttctgccatcttgaaggacccctcagctaagcaacatataagaggttcttatattcttgccacaaaccgcactgatgtgtggatgggcccttcccagttgataactgacaagcttaggctgcacaccacttacagagtttctgcttgggtacgtgctgggtctggaggacatggacgttaccatgtaaatgtttgtcttgctgtagatcatcagtgggttaatggtgggcaagtagaagctgatggcgatcaatggtatgaactcaaaggagcattcaagcttgaaaagaagccatccaaagttactgcatatgttcagggaccgcctccaggtgttgatctcagagttatggggttccaaatttatgctgttgatagaaaagcacgttttgaatatctgaaggagaaaactgacaaggtaaggaagcgtgatgtcatcctgaagttccagggatcagatgctgcaaacctttttggttcatctatcaagatacaacagaccgagaacagttttccatttggatcatgcatagggagaagtaacattgagaatgaggatcttgctgatttcttcatgaagaactttaattgggctgtatttgaaaatgaactgaagtggtactggacagaggctgaacaagggagactaaattataaagattctgatgagttgcttgaattttgccggaaacataacattcaagttcgtggtcactgcttattctgggaagtagaagattcagtccagccatggattcgatcattacatggtcaccacctgatggctgctatacagaatcgtttgcaaagtctgttgtcaaggtacaaaggtcagtttaaacatcatgatgtaaacaacgagatgcttcatgggtctttctaccaagatagactgggaaatgatattagagctcacatgtttagggaagcacataaacttgacccttcagcagtactctttgtgaacgactacaatgttgaagatcgatgcgactcaaaatctacaccagaaaaattaattgaacagattgttgatctccaagaaaggggtgctccagttggtgggattggcttgcaaggtcatatcacgcatccagtgggtgacatcatctgcgattccctggacaagctctccatactgggtctccctatctggatcaccgaattggatgtcacggctgagaatgaacacatccgagccgatgatctggaggtgtaccttcgcgaagcctttgcgcatccttccgtggaggggattatcctttggggattctgggagctgttcatgttccgagaacacgctcacctggttgatgttgatggaacgatcaatgaggctggcaaaaggtacattgcactgaagcaagagtggctaaccagcattactggcaacgtggatcaccatggagagttgaagttcagaggctaccatgggtcatacacggtagaagtagcaacgccttcaggaaaggtaaccagatcgtttgttgttgacaaggataacgctgttcaggtggttaccctgaacatttag</cdnaseq> |
| Protein Sequence |
<aaseq>MRRRWGCLSSLCRPRRGGRAAAAPLPQPDPPRLESKEVEEHGAS DKVVMENILSNNDFSEGLHLWHPNGCHGFVAVEGSGYHHGIRPHSGSNYAVLTRRTHN WQGLEQDITEKVTVGTEYIVAAHVRVHGELNEPVGIQATLKLEGDGSSTNYQSVARIS ASKDCWEKLEGSFELKTLPRRLVFYIEGPPPGVDLLIDSVTISYKKTERAASKLVSGT ENIISNYDFSEGLHLWNPICCHAYVASQWSGFLDGIRGSSGENYAVVSKRTESWQGLE QDITDKVSAGTAYAVSAYVRVDGNIHTKVEVKATLRLHNTDDSTHYSPVGSLLASKEK WEKMEGSFCLTNMPKRVVFYLEGPPAGVDLIIDSVNVTCSGYQQLKEVKVPSGVDTIV KNPHFDEGLNNWSGRGCNICRHELTAYGNVKPLNGSYFASATGRVHNWNGIQQDITGR VQRKVLYEISSAVRIFGSANDTEVCVTLWVQEYGRERYVSLAKNPASDKQWTHLKGKF LLHAPFSKAVIFVEGPPAGIDILVDGLVLSPARKLHAAPRPRIENVSYGANVIHNSAF SHGLSGWSPMGSCRLSIHTESPHMLSAILKDPSAKQHIRGSYILATNRTDVWMGPSQL ITDKLRLHTTYRVSAWVRAGSGGHGRYHVNVCLAVDHQWVNGGQVEADGDQWYELKGA FKLEKKPSKVTAYVQGPPPGVDLRVMGFQIYAVDRKARFEYLKEKTDKVRKRDVILKF QGSDAANLFGSSIKIQQTENSFPFGSCIGRSNIENEDLADFFMKNFNWAVFENELKWY WTEAEQGRLNYKDSDELLEFCRKHNIQVRGHCLFWEVEDSVQPWIRSLHGHHLMAAIQ NRLQSLLSRYKGQFKHHDVNNEMLHGSFYQDRLGNDIRAHMFREAHKLDPSAVLFVND YNVEDRCDSKSTPEKLIEQIVDLQERGAPVGGIGLQGHITHPVGDIICDSLDKLSILG LPIWITELDVTAENEHIRADDLEVYLREAFAHPSVEGIILWGFWELFMFREHAHLVDV DGTINEAGKRYIALKQEWLTSITGNVDHHGELKFRGYHGSYTVEVATPSGKVTRSFVV DKDNAVQVVTLNI</aaseq> |
| Gene Sequence |
<dnaseqindica>325..432#986..1350#1426..1567#1915..2279#2357..2516#2922..3259#3361..3538#3677..4210#4399..5514#gttcgtctccttggcatctgatcctattcccctctccgcgcacgtcgggtttcccccccgtggacaacgcaaccgaccgaccaagctgcggacagcgccgtctctgctgtctctctctgtatgcttcccttcctcctcaagctgggcctcggtggtcggtggttaggtgaaggtaaaccaccggctttctcacgcgcctttctttctgttcatttccttggggtttaattcttggttgccagcgagcccggtaggcagtagtccacccaccggcaggttcttgctcctcctcctcagccgctgccggatttgagatgagatgagatgaggaggcgctgggggtgcctctcctccctgtgccgccctcgccggggtggacgcgcggcggcggccccgctcccgcagccagatccaccgcgtctcgagtccaaggtatctatatatcatccgtagctactagctagtgcctttgtttctttccaacttccaagggtaaatgagttttgctagttctctgacctggaaggatccaggatagttttgcttggtggtgccatcccttgctgattgactgcgtaccaaccgcaaagggcgcaaggaatgtttagtcagggcgtgtttacagtgtgattgatgaaaaatggtggtggagatcctaccaataagaaatggaattatcttttaatttcatggttggaattttgattgtttgcaagatatatagtcctaagagttaaatttcaaggttggaatgcaagatatgtatagttgtagagtttgacattgtaggaaaggatgaactagataccactaaaaaacatacagatccagtgatacacactaatatggtttgagacctatagttccacgagtccctaacaatctacatgtgtgataggatgttagctgtccatgaatttcagttcctctcccaatgacatggactagcaatgcagaaatttatttatcatacaatgttgagcaggaagtagaggagcacggcgcttccgataaagttgtcatggagaacattctgtcaaacaatgatttttcggaaggtctacatttgtggcatcctaatggttgccatggatttgtggctgttgaaggatcaggttatcatcatggaataaggcctcactcagggtcaaattatgccgtacttactcgtcgcacacataattggcaagggcttgagcaggacataacagaaaaggtcactgttggtactgagtacattgttgctgcccatgtcagagtccatggtgaactcaatgagcctgttggaattcaggccactctaaaacttgagggcgatggttcttctacgaactatcaatcagttgcaaggtattttaactggaaggtgattttatagaatattatacaccatcatggatttatcagttgaagttgttttaccaggatctcagcatcaaaagactgttgggagaagttggaaggttcatttgaactaaaaactctaccaagacgtttggtattctacattgaaggcccccctcctggtgtagacttgctcatagattcagtcaccatctcctacaaggtatgcttttaaatctctttgcttatgttcatgtcagagcaatcttgtgatatatgaatcatgctctaaaagtctgatttaatgctgtcttaatatgtccacaccatatttctcagtagtcatagcaaagaagaggaaaaatcatacactaagactaattgtgatcatgatatatttttcttaacatgccagtacatactactacagtttttgctatgcgtagttgagacatgtcatgtttttttccccatcaagctatcagtggtgcttaaaggttgacattgtattattcgattggatttgttactctaagctaccattttctaactacttcagagtttctgtagaaaacagagcgggctgcatccaaactggttagtggaacagaaaacatcatttcaaattatgatttttcggaaggccttcatttgtggaaccctatctgctgtcatgcatatgtggcatctcaatggtctggtttccttgatggtattagagggagctcaggagaaaattatgctgtagtttcgaagagaactgaaagctggcaaggtcttgaacaagatattacagataaagtatctgctggtactgcttatgcagtatcagcctatgttagagttgatgggaatatccatacgaaagttgaagttaaagcaaccttgaggttgcataacacagatgattcaacgcactacagtccagttggaaggtacatttcataaaagttgttcaacgatcaaattttttctcacctctcctctaatttttcccttcttgatttaatagcctgttagcttcaaaagaaaagtgggagaagatggaaggatccttttgcttgacaaatatgccaaaacgtgtagtattctacctggaaggacctcctgctggcgtggaccttatcattgattccgtaaatgtaacttgctctggatatcagcagttaaaagtgagtgcttttccaccagcatttgctttaacctttttctaagaaacgttattaactttttcttcatgtgaatcttggcgtgatacatgtttctcggaagtataattaggaggctgagcaactagcttgaatttactgattattgaatgtagagtgctaaaattcttcttagccaaaatttatgttttgaaccattgctatttttctgacctaatgtattcccaaataggttttttagtgcaaaggggtaacacatagttgattttttttacaaatttaaatatgtctgcttctaccttcagtggatttatctcatcatatgttcattcatgcttttcctgctatataatacaaacattgcctttttagccgatgcttattacttcttaatctttctttccaaaggaagtaaaagtaccaagtggagttgataccatcgttaagaatcctcactttgacgaagggttaaacaattggtctggaagaggatgcaatatctgtaggcatgagcttactgcttatggaaatgtcaagcctctaaatggcagctattttgcttcagccactggacgggtccacaattggaacggtatccagcaagatatcactggcagggtacagagaaaagttctttatgagataagttctgctgtccgcatatttgggagtgccaatgatacagaagtctgcgttactctgtgggtacaagaatatggccgtgagcgatatgtaagccttgcaaagtaagtatatgcttatttcattggttacactttctgtgacaagtggcagcgttatttttgtaaacatagactggtttactaacatattcttgtatacaaaggaacccggcatctgataagcaatggacacatctaaaaggaaagttcctcctccatgccccgttttcaaaagctgttattttcgtagaggggccacctgcaggcattgatattcttgttgatggccttgtcctatctccagcaagaaaactccatgctgcaccccgcccaagaattgaggtttaaactaattccttctgactaacattcttatttaaatgatcttgatacatgtttagaagtttatcaaatcatgatgatggacagtgaaattttgaacaccaattctgaatcaaggataatttctttatactgcagaatgtttcatatggagctaatgtaatacataacagtgctttcagtcatgggctttctgggtggagtcccatggggtcatgtcgattgagtatccatactgaatcaccccatatgctttctgccatcttgaaggacccctcagctaagcaacatataagaggttcttatattcttgccacaaaccgcactgatgtgtggatgggcccttcccagttgataactgacaagcttaggctgcacaccacttacagagtttctgcttgggtacgtgctgggtctggaggacatggacgttaccatgtaaatgtttgtcttgctgtagatcatcagtgggttaatggtgggcaagtagaagctgatggcgatcaatggtatgaactcaaaggagcattcaagcttgaaaagaagccatccaaagttactgcatatgttcagggaccgcctccaggtgttgatctcagagttatggggttccaaatttatgctgttgatagaaaagcacgttttgaatatctgaaggagaaaactgacaaggtaaactttccttacttcttttgtatgttaagatgataaatttatgtctgcagaagcttgaaaagaatctttattttcttcatggcaattttagaccaaaattttattctataaagtatccattgctttgcttataatagtgattgtgggcaacattgaagttacatttccttctttttcccaaataggtaaggaagcgtgatgtcatcctgaagttccagggatcagatgctgcaaacctttttggttcatctatcaagatacaacagaccgagaacagttttccatttggatcatgcatagggagaagtaacattgagaatgaggatcttgctgatttcttcatgaagaactttaattgggctgtatttgaaaatgaactgaagtggtactggacagaggctgaacaagggagactaaattataaagattctgatgagttgcttgaattttgccggaaacataacattcaagttcgtggtcactgcttattctgggaagtagaagattcagtccagccatggattcgatcattacatggtcaccacctgatggctgctatacagaatcgtttgcaaagtctgttgtcaaggtacaaaggtcagtttaaacatcatgatgtaaacaacgagatgcttcatgggtctttctaccaagatagactgggaaatgatattagagctcacatgtttagggaagcacataaacttgacccttcagcagtactctttgtgaacgactacaatgttgaagatcgatgcgactcaaaatctacaccagaaaaattaattgaacagattgttgatctccaagaaaggggtgctccagttggtgggattggcttgcaaggtcatatcacgcatccagtgggtgacatcatctgcgattccctggacaagctctccatactgggtctccctatctggatcaccgaattggatgtcacggctgagaatgaacacatccgagccgatgatctggaggtgtaccttcgcgaagcctttgcgcatccttccgtggaggggattatcctttggggattctgggagctgttcatgttccgagaacacgctcacctggttgatgttgatggaacgatcaatgaggctggcaaaaggtacattgcactgaagcaagagtggctaaccagcattactggcaacgtggatcaccatggagagttgaagttcagaggctaccatgggtcatacacggtagaagtagcaacgccttcaggaaaggtaaccagatcgtttgttgttgacaaggataacgctgttcaggtggttaccctgaacatttagcttgtgagatatgttcttatggagagtgaggtatatatatactgcgacatgtctttttggatgattagagtttactgttttctgtcaacaatttaccatgtatacgaactgctgaaattgctgtcatgccacttattaatgccatactcacatttaccttt</dnaseqindica> 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| External Link(s) |
