Os05g0399400

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Revision as of 10:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0399400| Description = Similar to Endochitinase precursor (EC 3.2.1.14)| Version = NM_001062012.1 GI:115463754 GeneID:4338719| Length = 109...")
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Gene Name

Os05g0399400

Description

Similar to Endochitinase precursor (EC 3.2.1.14)

Version

NM_001062012.1 GI:115463754 GeneID:4338719

Length

1095 bp

Definition

Oryza sativa Japonica Group Os05g0399400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19442214..19443308

Sequence Coding Region

19442214..19442827,19442918..19443308

Expression

GEO Profiles:Os05g0399400

Genome Context

<gbrowseImage1> name=NC_008398:19442214..19443308 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19442214..19443308 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaagccacgacgacagcagtggccctcctcgtggccgccgcggccatggcggcgcaggtagtcgccgagcagtgtggctcgcaggccggtggggcgctgtgcccgaactgcctctgctgcagctcctacggctggtgcggctccacttccgactactgcggcgacggctgccagagccagtgcgacggctgcggcggcggaggtggcggcggtggcggcgggggcggcggtggaggtgggggtggcggcgcggtggaggcggtcgtgtcgaaggagctcttcgagcagctgctgctccaccgcaacgacgcggcgtgccccgccagagggttctacacctacgacgccttagtcaccgccgccgccgcgttcccggacttcgccgcgacgggcgacgacgaggcgcgcaagcgtgaggtcgccgcgttcctcgggcagacctcccacgagaccacgggcgggtgggcgaccgcgcccgacggcccctactcgtggggctactgcttcaaggaggagatcggcgccacggcctcctactgcgtccccagcgccgagtggccgtgcgccccggacaagaagtacttcggccgcggccccatccaactctcctacaactacaactacgggccggcgggagaggccatcggcgaggacctcctgaacaacccggagctggtggcgtcggacccggtggtgtcgttcaagacggcgctgtggttctggatgacgccgcagtcgccgaagccgtcgtgccacgacgtgatcacggggcagtggacgccgagctcgggggacatcgcggccgggcgggtgccggggtacggcgtgatcaccaacatcatcaacggcgggttggagtgcgggttcggccccgacgaccgggtggcgaaccggatcggcttctaccagcgctactgcgacgtgctcggcatcggctacgggagcaacctcgactgctacgaccagaggccgttcaacagcgggttgacggcggcgcagtga</cdnaseq>

Protein Sequence

<aaseq>MKATTTAVALLVAAAAMAAQVVAEQCGSQAGGALCPNCLCCSSY GWCGSTSDYCGDGCQSQCDGCGGGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHR NDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAP DGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGE DLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYG VITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQRPFNSGLTAAQ </aaseq>

Gene Sequence

<dnaseqindica>1..614#705..1095#atgaaagccacgacgacagcagtggccctcctcgtggccgccgcggccatggcggcgcaggtagtcgccgagcagtgtggctcgcaggccggtggggcgctgtgcccgaactgcctctgctgcagctcctacggctggtgcggctccacttccgactactgcggcgacggctgccagagccagtgcgacggctgcggcggcggaggtggcggcggtggcggcgggggcggcggtggaggtgggggtggcggcgcggtggaggcggtcgtgtcgaaggagctcttcgagcagctgctgctccaccgcaacgacgcggcgtgccccgccagagggttctacacctacgacgccttagtcaccgccgccgccgcgttcccggacttcgccgcgacgggcgacgacgaggcgcgcaagcgtgaggtcgccgcgttcctcgggcagacctcccacgagaccacgggcgggtgggcgaccgcgcccgacggcccctactcgtggggctactgcttcaaggaggagatcggcgccacggcctcctactgcgtccccagcgccgagtggccgtgcgccccggacaagaagtacttcggccgcggccccatccaactctcctagtaagcacatcaaagctaggttcaattttttttatcaaattctcagcgcgataagaatggttttgaacttttgatcgatcgatctctcagcaactacaactacgggccggcgggagaggccatcggcgaggacctcctgaacaacccggagctggtggcgtcggacccggtggtgtcgttcaagacggcgctgtggttctggatgacgccgcagtcgccgaagccgtcgtgccacgacgtgatcacggggcagtggacgccgagctcgggggacatcgcggccgggcgggtgccggggtacggcgtgatcaccaacatcatcaacggcgggttggagtgcgggttcggccccgacgaccgggtggcgaaccggatcggcttctaccagcgctactgcgacgtgctcggcatcggctacgggagcaacctcgactgctacgaccagaggccgttcaacagcgggttgacggcggcgcagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0399400, RefSeq:Os05g0399400