Os05g0399700

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Revision as of 10:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0399700| Description = Chitinase (EC 3.2.1.14)| Version = NM_001062013.1 GI:115463756 GeneID:4338720| Length = 1587 bp| Definition = Oryza...")
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Gene Name

Os05g0399700

Description

Chitinase (EC 3.2.1.14)

Version

NM_001062013.1 GI:115463756 GeneID:4338720

Length

1587 bp

Definition

Oryza sativa Japonica Group Os05g0399700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19452714..19454300

Sequence Coding Region

19452788..19453280,19453366..19453498,19453698..19454094

Expression

GEO Profiles:Os05g0399700

Genome Context

<gbrowseImage1> name=NC_008398:19452714..19454300 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19452714..19454300 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcgcagcaagggctgcaaacctgcaggtggccatgaaggccctggcgctggccgtgctggccctcgcctacgccgcggcgacggcgcgcgccgagcagtgcggcaggcaggccggcggcgcccggtgccccaacaggctctgctgcagcaggtgggggtggtgcggcctcaccgacgactactgcaagggcggctgccagagccagtgccgcgtctcccgcgacggcggcgacgacgacgtcgccgcggtgctgctcacggcgccgggcggcggccgcgccggcgtggcgtccgtcgtgacgtcggaccagttcgagcgcatgctgccccaccgcgacgacgcggcgtgccccgcccgcgggttctacgcctaccgcgccttcgtcgccgcggccggcgcgttcccggccttcgccgccacgggcgacgccgacacccgcaagcgtgaggtcgccgcgttcctggcccagacttcccacgcgacctctggtgggccctactcgtggggctactgctacaaggaggtgaagggcgcgacgtcagacttctgcgtgccgaacgcgcgctggccgtgcgcgcccggcaaggcgtaccacgcccgcggacccatgcaaatcgcatacaactacaactatggggcggccggcgaggcgatcggcgcggacctgctgggcaacccggagctggtggcaacggacccgacggtggcgttcaagacggcgctgtggctgtggatgaccgcgcggtcgccgagccagccgtcgccgcacgccgtcgtcacggggcagtggactccgactcccgcggacagcgcggccggccgcgcgccaggctacgggctcaccacgaacatcctcaccggcgggctccagtgcgccggcggcaacggcggcgccgaccgggtcgcgttctacaagcgctactgcgacgtgctcggcgtcggctacgggcccaacctggactgcttcggccaggcgccgttcgacggcgacatcatgtcggcgtctgcggcgaagtag</cdnaseq>

Protein Sequence

<aaseq>MIAARAANLQVAMKALALAVLALAYAAATARAEQCGRQAGGARC PNRLCCSRWGWCGLTDDYCKGGCQSQCRVSRDGGDDDVAAVLLTAPGGGRAGVASVVT SDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTS HATSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGE AIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGR APGYGLTTNILTGGLQCAGGNGGADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIM SASAAK</aaseq>

Gene Sequence

<dnaseqindica>75..567#653..785#985..1381#actcaccagctacgtacactcaaccaacacaccactgaaaagcaagattttgttgaagaaataagcatcttgccatgatcgcagcaagggctgcaaacctgcaggtggccatgaaggccctggcgctggccgtgctggccctcgcctacgccgcggcgacggcgcgcgccgagcagtgcggcaggcaggccggcggcgcccggtgccccaacaggctctgctgcagcaggtgggggtggtgcggcctcaccgacgactactgcaagggcggctgccagagccagtgccgcgtctcccgcgacggcggcgacgacgacgtcgccgcggtgctgctcacggcgccgggcggcggccgcgccggcgtggcgtccgtcgtgacgtcggaccagttcgagcgcatgctgccccaccgcgacgacgcggcgtgccccgcccgcgggttctacgcctaccgcgccttcgtcgccgcggccggcgcgttcccggccttcgccgccacgggcgacgccgacacccgcaagcgtgaggtcgccgcgttcctggcccagacttcccacgcgacctctggtaacgtagtaacgtttacttgtcacgttggaactcacgtgtacgtacacatgtcttatgcacgagtgcgcatgtgtccctgcaggtgggccctactcgtggggctactgctacaaggaggtgaagggcgcgacgtcagacttctgcgtgccgaacgcgcgctggccgtgcgcgcccggcaaggcgtaccacgcccgcggacccatgcaaatcgcatagtaagagaacgcaaaggagcaaaccaaaacgtccatataaatgaacttgcaaacaaaaaatccacaaaatggacgaacactagaaaaatcttaaaatgcaacgggatttcatccgtgaaacgttcaatttcgagactagtactatttggactgaacaaatgacaaactactggaatctaattttcaaattcaatttcagcaactacaactatggggcggccggcgaggcgatcggcgcggacctgctgggcaacccggagctggtggcaacggacccgacggtggcgttcaagacggcgctgtggctgtggatgaccgcgcggtcgccgagccagccgtcgccgcacgccgtcgtcacggggcagtggactccgactcccgcggacagcgcggccggccgcgcgccaggctacgggctcaccacgaacatcctcaccggcgggctccagtgcgccggcggcaacggcggcgccgaccgggtcgcgttctacaagcgctactgcgacgtgctcggcgtcggctacgggcccaacctggactgcttcggccaggcgccgttcgacggcgacatcatgtcggcgtctgcggcgaagtagacgtgtgcgccgccgtgccggccccgatcgatcgaataaaattgcgtgtgagtacgcacttcgcacggtcgctctgcagccagagtgagtgagtttgctttatgtatttttcggtttcgggcgaggaattcttcatggatctgtgaaagcccatatgtatgcatggtcatggcatgaataaagtagtactgatcttctcgaatacg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0399700, RefSeq:Os05g0399700