Os05g0400600

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Revision as of 10:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0400600| Description = Cobalt transport protein family protein| Version = NM_001062017.1 GI:115463764 GeneID:4338725| Length = 5541 bp| De...")
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Gene Name

Os05g0400600

Description

Cobalt transport protein family protein

Version

NM_001062017.1 GI:115463764 GeneID:4338725

Length

5541 bp

Definition

Oryza sativa Japonica Group Os05g0400600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19489680..19495220

Sequence Coding Region

19489740..19490096,19490809..19490925,19491418..19491654,19491984..19492146,19492244..19492321
,19493246..19493310,19494364..19494513

Expression

GEO Profiles:Os05g0400600

Genome Context

<gbrowseImage1> name=NC_008398:19489680..19495220 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19489680..19495220 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccgtccacctccgccctatccactcgctgtctctccctctccctctcctcgcagccaaggccgccacgcccaatcccggctggctcccgctctcggcgaagccaggcgcagggaggaggagaagcttgctggtctgcgccgcctccgaccccagcaaggccgcggggaagggcgaggcgggggatgccgtcgccaggtgggcggcgtggatcccgcgggctgcggtgggaggggccggcccggagcaggtcctcaggctcatctccggcgccgcggccacgcccatctgccagttcgtcgactcgccccgcaccttcctccacgccatcgatccccgggttaagctggtgtggctcttggctcttgttgtcctaccagccagatcaaatatttacttgcggtttggtttagtagcataccttactctcctctctatgtgggttctcccaaaccatatttggaaggaccaacttggaagggtcgctctgctttcaggcatcatattcataatgctgggatttggttctgatggtgctccttcattagtccagacaagaactcctcccccatctgttataggtttgccaaacatacctacatccacaaatggctattcttacacaatcatgaaactgggtccactgcaatttacaaggaaaggcctatcagtagcgagtacgtcagcatgcctctcatttgcgatatttcaaagtgcaagtctctgcttgacaacaactactcctgagcagcttgcttctgctttatggtggtttatgattccactgaagcatatcggcgtaccagtacctgagataatactcacactcttactatctttgaggttcattaatcttgtatttgatgaggttcgcaattcagcactggcgattgtagcacgtcggataaattgggaaaagctggcaactatggaaactattgacattttcttcaactatgtgcggcgaattttcaaaaatatatttgatcacgcagagcaaatatccaaggccatgattgctcgcggatttcgtggtgaccctaacaaccacaagatctactttcttacagaatcttcttttggcattgtggatgtcttttcattactttgcctatttgctctagtggccctggcttccatttcggacaaattggtttga</cdnaseq>

Protein Sequence

<aaseq>MAAAVHLRPIHSLSLPLPLLAAKAATPNPGWLPLSAKPGAGRRR SLLVCAASDPSKAAGKGEAGDAVARWAAWIPRAAVGGAGPEQVLRLISGAAATPICQF VDSPRTFLHAIDPRVKLVWLLALVVLPARSNIYLRFGLVAYLTLLSMWVLPNHIWKDQ LGRVALLSGIIFIMLGFGSDGAPSLVQTRTPPPSVIGLPNIPTSTNGYSYTIMKLGPL QFTRKGLSVASTSACLSFAIFQSASLCLTTTTPEQLASALWWFMIPLKHIGVPVPEII LTLLLSLRFINLVFDEVRNSALAIVARRINWEKLATMETIDIFFNYVRRIFKNIFDHA EQISKAMIARGFRGDPNNHKIYFLTESSFGIVDVFSLLCLFALVALASISDKLV</aaseq>

Gene Sequence

<dnaseqindica>61..417#1130..1246#1739..1975#2305..2467#2565..2642#3567..3631#4685..4834#gagttatccttaccccggccgcgcacggcgcggcgcaggctgcccggagcggagaatccgatggccgccgccgtccacctccgccctatccactcgctgtctctccctctccctctcctcgcagccaaggccgccacgcccaatcccggctggctcccgctctcggcgaagccaggcgcagggaggaggagaagcttgctggtctgcgccgcctccgaccccagcaaggccgcggggaagggcgaggcgggggatgccgtcgccaggtgggcggcgtggatcccgcgggctgcggtgggaggggccggcccggagcaggtcctcaggctcatctccggcgccgcggccacgcccatctgccagttcgtcgactcgccccgcaccttcctccacgccatcgatccccgggttaagctggtaactaagatttccccggagacaagacaccttgcctcacctcacgcttatctgctccgtgtttttggatcgaatcgccagtaaacggcaggggataaggatgcacagtaagtgcttgtgaaaatgttcgcccctgggctatgaagggatgaatgaaatgctgaattgctgatgcaaatacatcgccaaaaatcttgctcaattttatatgctaagagccatttgtaccaccaacgtgagcgtgtgcaactgaccaactgtgcctattctcgggttaacttggattgttggttgagcatacataatgctgtcgtgaactttcatgacaacatactagtatgttttttcaatgattggctgattctcattggagccacaaactgtgaaatcattaggttttgacgttttgttttctgctattttagaaactgaccttaaccattgaacctgcgtcagtatatctataagttatattggacactttgtctgatgattatttagaatatttatgtaagttaagaaatagtgtccgacggatttttcccttcccccgagtttgtggaattttgattttgtcacggtagttgttttaacaaatttcgtagtatatatttaattgtcttttgtgcacaaaaataatgattaagttgatgattaactaaatgatcgtccaatttcatgctgcaacctgaccaatcacttttgttctcaggtgtggctcttggctcttgttgtcctaccagccagatcaaatatttacttgcggtttggtttagtagcataccttactctcctctctatgtgggttctcccaaaccatatttggaaggtacgctctctgatctactgttaaaatgggcattcaccattttatgcacaaatagtgctggcctgttgggttgccagttgtggtttaaattgtctactactttatatatatatggagattcccttatgatgttgaatgcaattcattttttttaaaaaaacatgagtgtggcttatgatttcctactgttgaaagggtgactgtgaagtactggacaagttatatgggttttgtactgacaaactatcatgcttggcttcgtttcatcgcccccccccccaaaaaaaaaaacacacacacacacaattttatgtgacttttaagtataccaatgaaagctgtccatgttttacttatagattttcctgtacgatttggctatttttcactccttcgatacatagtctctgccgttatgctatcttctttgttaaaatattacccttgaagtgaacctgctgtttagctttatacaaattacattctctataggaccaacttggaagggtcgctctgctttcaggcatcatattcataatgctgggatttggttctgatggtgctccttcattagtccagacaagaactcctcccccatctgttataggtttgccaaacatacctacatccacaaatggctattcttacacaatcatgaaactgggtccactgcaatttacaaggaaaggcctatcagtagcgagtacgtcagcatgcctctcatttgcggtatgtcctttccttttatgggtaatattttccatacaaattgttttttttctctaatgcaaatgagagctgtgcatcattatattaagaagaaagaaaagagtctgaaaaaattcaaacaagcccattagagaaagatttagcatgaaaggacttgccaaagaaataaaaaagaatatggccagcaacccaaagcccagaggatttgtttgaaccaatactttcatcatctagcaattggcacataagacaagcatgtcctgagttgacaatacactttttttaataaaccatttaggtataatctcccatactttcttttgatgcagatatttcaaagtgcaagtctctgcttgacaacaactactcctgagcagcttgcttctgctttatggtggtttatgattccactgaagcatatcggcgtaccagtacctgagataatactcacactcttactatctttgaggttcattaatcttgtatttgatgaggcaagtatagggtgctcaagtaaacatcggctatatttgtctttctaactagaacatgcattgtgattgtaacattattttaaatacttttcattaggttcgcaattcagcactggcgattgtagcacgtcggataaattgggaaaagctggcaactatggaaactattgacagtgagtacttcctacttctgtaaccaatgcccgggagtgaactagctgacaaacttagtcaggaaccagttgctggctgattttggtgggggaattgcagcagaaaactaatctctactgaatttactagttgttatgtaccttgatttattttgtcagcaagatttaactaagtgtttttcatgatttgcgctactgaaatgaaggcgattacagttagttgaagttggtccaacttcaagtgcttctgctcagttcaaattcaaagactttaatatatgagttctgtttcttagtctagttcatttgaggtagcttgtggcttgtgctgtctagctatagagaattggtctcctgtcagaggtaaataatggattatatcaactggtcctgtagtcctgttgataccgacaagttcatttattccaatatttcttattccaattcatttacccacttagcagttttatgtctgctactccctatgtcccaaaacatatctcctttagcattcaaaatttgtcccaaaaatatagccaccttttcacctgttaaccaatcacaaccatctcccatttaacatttccacttacttcctcttatcaaccaatcacaaccaaccataattgtatttgacctttctccttaatactcgtgcccaactataaaacttcttatattttgggatggatcatggaagcagtatatacttttgcaagtccaaaccttacttgagttcgtgaggttaaataactcttgcaaaggttggacttggtgaatttggctaatttcagcagatggcttttcaattgttctgtttatattgaaacacctaatgtaggataattttatgcatttaggttgtaatacagaacttttgttaacttctttttggggaattgatcctttgcatcaaaattgcagttttcttcaactatgtgcggcgaattttcaaaaatatatttgatcacgcagagcaaatatccaaggtcagtcagttctgaattttacctttgaggctttcactgactacgaagttataattaatgcactattgtgaaaaaaaaaaacaatttattgaacattggcataagctactcacgttatattgagctattaactaattagaatttcctatggatatcccgactctcatttagtgtaattcaaaacttttaaatagaaaaccttcattgaccatttgggaaattctgaaatgtcaactcagtgatatactcaatcttgactgcttcccaaacatgcgcttgccttataatctaaccaaatctgtgtggcttttctgaacttcagaattttgtaggattcttctgttgttgtcaagaattacaaccttgattctgtaatattagtcgcttctccttctctaaggagatcatcagttgtgatatttcatgagcctgacattggctatatataagcataggcttatgaccaatatgctattcctaatagctgggggtcctattacaaaatctaactgctggtgcatacatggccatgaatgtactggctagcctgacagttaaatgggcttttgctatacaggacgtcaatgataatactaatagtataagtccatgtctaatccttcattcctttcttgtgaaagtggtgttgcaggtctgttaagttgaatatgaatgtgtaagaggaaaatttattatggtctgaatgtattgaaccaaactgggttaagaattatgcgctcttagtcttatcacactattcaaacttgccaaagtttaggctgaaggcaatcatactgcaggttgtctggttagctgattgtgagaacttatcaagaattttactggttatgacctaaaagtaacatacagttttgataaaaagatcttgtactagtactgcggggcttgtaaggaggataaaacttaaattacatcattgctgctgcccaacattttcaagcacttatattgtacatacatggttcactatagccgaaattactttgcacatgactgcacttcatactctgaatgtctgtctgatttttgtaggccatgattgctcgcggatttcgtggtgaccctaacaaccacaagatctactttcttacagaatcttcttttggcattgtggatgtcttttcattactttgcctatttgctctagtggccctggcttccatttcggacaaattggtttgatggtatgataaggcacctgtgatctattcaccagtttgatgtcatggtagtgttgaacttattacatatgagagtatcttcttgattgtttcaggaatcaggaactaaagactatcacgacaacttcatccccttaattgcttaaaaatgctgagttgcaaaatcagtttttggggcatcttaggagccccttctgtgtagtggaatcgtggaaacgatggtaacgattgaatcgtcaggaagatcattttggaagatcattttgatcaagtgtatgcaccgcaagcccctttggaaggaagactgaaaggttaacctctggctctaacttctttgcagccttgcaggtgagttgagacttatatatccaaataatttttgctctttaccaatgttttatctcctgtcatctgatttctgttaataccgcaggagcagtgccgtatgcagatccttcattgaaggaccacgtgagaatattgagtataactgcacaatcaaagtatacttcctgtcttcattaggaagtgccgtcaagaacttaagtggggtgaccgctgtgttcttgctaacttattgtatctgcccttagcttgatcctaacatgaacaactgacagtgtaaacctatcttttttcattagccctttctttctctttagttttattttgcaaggatgcagttcgaagcattgaatgtttaattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0400600, RefSeq:Os05g0400600