Os07g0498900

From RiceWiki
Revision as of 20:36, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0498900

Description

Protein of unknown function DUF231, plant domain containing protein

Version

NM_001066247.1 GI:115472226 GeneID:4343306

Length

5565 bp

Definition

Oryza sativa Japonica Group Os07g0498900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19388146..19393710

Sequence Coding Region

19388202..19388610,19389080..19389257,19389669..19389809,19391473..19391593,19392307..19392441
,19393117..19393374

Expression

GEO Profiles:Os07g0498900

Genome Context

<gbrowseImage1> name=NC_008400:19388146..19393710 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:19388146..19393710 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgccggcgaggagcccggccgccggcgtgcggaggcgaggcgcgctcctccccctcgctttcctcctcctcctcctcctcctgctgctgcacctgacctcctcgcctgcccgctcccccaactccccgctgctccgcggctccggcgacggggagccccggcagcgcgggccctgcgactacgcgtccggcgagtgggttcccgacgacgacgatcccgcggtgtccggcggcctgaggtacgaccagacgtgcagggagatcttcaaggggtggaactgcctcgccaacgggaagcgcaacggccgggagctgctccgatggcggtggaggccacgcgggtgcgagctccccaggctcgacccgctccgtttcctggagtgccacaggaacaccagcattggatttgtgggtgattcattgaaccggaatatgtttgtctcgttggtctgcatgcttaggggggcgagtggggaggttcgcaagtggcgtcctgcaggagcagaccggggtttcacattcctgcgctataacctcaccctcgcataccacaggactaatcttttggtacgctatggtaggtggtcagccagtccaaatgggggtcccctagaatctcttggatacaagcaaggctacagagtagacgttgatattcctgaccaaacatgggcagaggcaccaagcttccatgatgttcttattttcaacacagggcattggtggtgggccccttcaaaatttaatccagtacagtcaccaatgctattctttgagaaggggattccagttatacctcctttattgccacctgcaggactggatttggctcttaaacacatgataatatttgtgaacaaagcaatgagacccaatggggtgaaactcttccgcactcaatctcctaggcattttgaaggtggtgactggaatgaaggtggatcttgtcaacgtgacaagcccttgtctgcagaagaggttgaggaacttttctctttggacaacaatggcacaaacgtagaagcacgcttggtaaaccagcacttggtgagggctcttgaaaagtctactttcaatgttctgaatataactggaatgagtgaattcagagctgatgctcatccttcaacaactggtgggaagaagcatgatgattgcatgcattggtgtttgccagggccaacagatacatggaacgatttgctagcagcaaatctattggcgactgagagttag</cdnaseq>

Protein Sequence

<aaseq>MPPPARSPAAGVRRRGALLPLAFLLLLLLLLLHLTSSPARSPNS PLLRGSGDGEPRQRGPCDYASGEWVPDDDDPAVSGGLRYDQTCREIFKGWNCLANGKR NGRELLRWRWRPRGCELPRLDPLRFLECHRNTSIGFVGDSLNRNMFVSLVCMLRGASG EVRKWRPAGADRGFTFLRYNLTLAYHRTNLLVRYGRWSASPNGGPLESLGYKQGYRVD VDIPDQTWAEAPSFHDVLIFNTGHWWWAPSKFNPVQSPMLFFEKGIPVIPPLLPPAGL DLALKHMIIFVNKAMRPNGVKLFRTQSPRHFEGGDWNEGGSCQRDKPLSAEEVEELFS LDNNGTNVEARLVNQHLVRALEKSTFNVLNITGMSEFRADAHPSTTGGKKHDDCMHWC LPGPTDTWNDLLAANLLATES</aaseq>

Gene Sequence

<dnaseqindica>57..465#935..1112#1524..1664#3328..3448#4162..4296#4972..5229#gcctcactccgccgccacgtcaccggatcccccacgcctcgcttcccccaccgcgtatgccgccgccggcgaggagcccggccgccggcgtgcggaggcgaggcgcgctcctccccctcgctttcctcctcctcctcctcctcctgctgctgcacctgacctcctcgcctgcccgctcccccaactccccgctgctccgcggctccggcgacggggagccccggcagcgcgggccctgcgactacgcgtccggcgagtgggttcccgacgacgacgatcccgcggtgtccggcggcctgaggtacgaccagacgtgcagggagatcttcaaggggtggaactgcctcgccaacgggaagcgcaacggccgggagctgctccgatggcggtggaggccacgcgggtgcgagctccccaggctcgacccgctccgtttcctggagtgccacaggaacaccagcattggtccgtgctcgttcccatttcgtgtgttttttaccactgcagcttgttctatggtgactagaatagtagaacttgaggagggagttatgtgcaaggtaaatgtggcgctgcaatttacaagctagatgcagttcattctgtagcgaggatcatttgacattgccaatgaaggcatctttgtggagtgtagcaacgtgcattgtgcgtgccgcttttagcttggaaagatcagcatggaaggaacgtggtttccacctgattaatttgcaattcaaggtagtatattttgccatgcgtgaattgtatgtcaaatatatagaagacgtgtaaatttttacctgcaatcttgtagtttgattatgtggcggagcatgttcagttgttgaggctctcatacatgtaaagaatcttagttggacaagaagtctcgacttgctgttcatgatttatgtttaatggtttgttgcaggatttgtgggtgattcattgaaccggaatatgtttgtctcgttggtctgcatgcttaggggggcgagtggggaggttcgcaagtggcgtcctgcaggagcagaccggggtttcacattcctgcgctataacctcaccctcgcataccacaggactaatcttttggtacgctatggtaggtaagaagtgtcatttgagtaataccaaattatagttctttggaagtatggtgtactccacatcatgcaattcccttctgtgttacaactgatttaattatataagtacaattctgtgcacagtagtacatatttttgttctgcagctttgggcatttgctattttgctttcagttttggactgtagctgttacttactagtagtattggaatgcttaccagtaggcagtagtaaacttttctcttgtctgttgactactgtttgtctttatattttcattaatttttaaatatagtagactctgccgctttcttaatgtttttcactgcgtcatagtttttctttcatgatgttgttgctcatatattgctgaggttattactcaaagccgtataatgctgatgttgtaggtggtcagccagtccaaatgggggtcccctagaatctcttggatacaagcaaggctacagagtagacgttgatattcctgaccaaacatgggcagaggcaccaagcttccatgatgttcttattttcaacacagggcattggtatgtgaacatcaatcataagccagataacatttttttcacttagatgcccaattaagtagatcctgatccatgaatgttatttcatgtttgaaaactttgagtaaccagttaacagcagaaatttattacgttaatcttccttgtactgtagttccaatatttgccttctccctcaaacctcggatatctaactagatattatccaccaatcaagatttgtgttgctattgatctagcttattaactaatttttgccaggacatatagtaatttggaaatacgcctacctttaacaaacactttccaagtatgagaaattaagtctggaagcttctcttggatatgattggccaatgtttttgcaataatttttgtaagaaatgttacgaagacttgtaggtctataatcagcaggagtggcaggactggatattttttggaattaaaacaatgttggtagcgtccatacctttttgcaaatttaactgcattgtagaactcctgtaccattttggtgacatcattctcaatccattgccaagctgctctataaaacgccacatttagcccatctagtcctggagatgcatctcttcgcatttgtttgaggatctgaaaattttgctcctctgttggaacttccggtggctcaaaagtgtgttgcccttgctgatcttgagaggatgtgactccttaatctgtgtttgaagtctggaaaagatctaaataagagataaatgttgagcaatttcgtcaggatcagttgttagatgattattatgcatgacaattggtatcctgtttttccttccccttttttgagctgcttgctgaaagaaagctgtgtttcaaccacctatttggacccaatatttcttagctctttgcctgtgaaaatccttgttgctgagccaagtttctctcttgaagggctagttaatctctattcggagagctctggatttttcaggattttttcctctacttggcatagtttctggcttcctgctgaaggggtttcttccttttgctccaagcaaagtagttctcttttggtaattaagatgctccgaatttttccaagctgcctgagcttcctgttgaaaatcttaccccccaccccccaccccccaaaaaaataaattccaccacttgtcaaatttgaaagttcttttaggttttctgtttttaggatttaaaatagaaatagtttgagtatgatcactataaagcttaggtaaatggtaggcagtagtattaggaaaatgcacaccattcaacatttcctaaacaacaaacaagatgttcaaggaccagatccttaccatctcttttgtttgactaggtgtaggctgggccattatacttcaggtatataagatcaatatttctgatatgatgttgaaaaatgtcaatacgagtttgattagcaggtgtagcaccagacttctcattagcatgcataatatcattcaaactgttttggtaaactgtttttattcttagctagaatgctagatatatctatagatgtatgcagcttgctacacgataagggctaatttgctaagctatctcctgacttcctgactctcgtttattttgttaaaatgcataaatattatctttgctgggattcaaactcatgtattttgtacaggtggtgggccccttcaaaatttaatccagtacagtcaccaatgctattctttgagaaggggattccagttatacctcctttattgccacctgcaggactggatttggctcttaaacacatggtatggatatctgcggttgtcttttgagaaaaaaacattttattttcttgataatgcataactattaagtatttttgaactttttgtgtaattttgtcccgaaattatttgctgattacagaatgaggtgtttttttttgtgaaatattatattaccaatgggctataagcttaaatattagccatgtctccatgagagagagagagagagagagagagagagagagagagattgtacttcatcaagcagtaaattcaatttgttcttgttgccttttccttaaactagctgaatgctcatactttcccacggataaaagaaaacatatttataatattgcccacaacaactacaaatatattttccataaatgtgtcattcatccttttactatagggaatattcaccttaatttgattttatgcatggctatccatttagatttgttattttttaaaatattaagaagtagatagggtggcagattcagtaccaccatcactaccttctttaaaggagtatagatatagaaaatatttttccacctttgttttacttgaatatatatatttccaccttgtgaattttatttgattgttgggccttagtagccttcgtatgtatccaaggtgaacattactaacttcctgttttctgtcgttatgccactcaacctatcttcctcattctatggatatacaatgtccatcagataatatttgtgaacaaagcaatgagacccaatggggtgaaactcttccgcactcaatctcctaggcattttgaaggtggtgactggaatgaaggtggatcttgtcaacgtgacaagcccttgtctgcagaagaggtactgaaactaaagctcattacatactttgatttttgttgtcttcctttacattattttcttttctttaccttttcctttatgctaagcttaacaagctgactatttgtgctaagcttaacaacttgtatatctgaatcaatggcacaccatctgttttaccttgacatagatgaataggaatttgattccttcaattgcctgaacttaacctttttgtcgaggattctaaaatcttttttcagccacctgtaatcttccctgttttcaattttctgtgttcttttgcatggacctaatcatttcaagcacatctgacacaaccaacaattcagcattcagttgacaattaaagagctgcaattttgaactatttatcctctgtggacatcaatttttgtacctaacaccacaaatccattagtatattgtatttgcgctataaatatgcattaactgatagttaattttgttttcctctgttgggagaacagtcttctgttaagtagcgtttgatatgaagatgattggatgattaattgttctgtattgcagtcatattattcttttccctttcttttattggtccaaataccaactataggggtttgagaacttgatgccgcttggaacctggaaatttgatattaataccttgagctcaaccttcttcaggttgaggaacttttctctttggacaacaatggcacaaacgtagaagcacgcttggtaaaccagcacttggtgagggctcttgaaaagtctactttcaatgttctgaatataactggaatgagtgaattcagagctgatgctcatccttcaacaactggtgggaagaagcatgatgattgcatgcattggtgtttgccagggccaacagatacatggaacgatttgctagcagcaaatctattggcgactgagagttagtttgacaaaacgttgagactcttttgcttgagaaattctcccgagatttttgtgggttgtgaacatgatgaagcatcgatcgttgcacagcattgttttgatcaaagcttattcacggcagcttcttcatataggcattagagtattgagcattagacaatgtaaagttaacttcatttttgtgtcattgtgtgtgtgttttgggcggtgggtgaggtacttctgttcaaatttgtcctagagtttggatagtgattctgtccatctgtaaactgcttcctaaactactaaacggtgtatatttttgcaaaaaaattatatacgaaagttgctttg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0498900, RefSeq:Os07g0498900