Os05g0404200

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Revision as of 10:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0404200| Description = Mss4-like domain containing protein| Version = NM_001062036.1 GI:115463802 GeneID:4338744| Length = 2830 bp| Defini...")
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Gene Name

Os05g0404200

Description

Mss4-like domain containing protein

Version

NM_001062036.1 GI:115463802 GeneID:4338744

Length

2830 bp

Definition

Oryza sativa Japonica Group Os05g0404200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19688581..19691410

Sequence Coding Region

19688610..19688977,19690728..19690884,19690997..19691161

Expression

GEO Profiles:Os05g0404200

Genome Context

<gbrowseImage1> name=NC_008398:19688581..19691410 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19688581..19691410 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgtccagcatctgctcaagctgaggatggcgtcgccccacccgcacccgcaccccggcgcgccgctcgccgcgcgcccgctctccgcgctcgcctccttcttcctcgcccggccctcctccaccgccgccgcgcctcctcctcggcacgtcaccctctcgtgctcgcggccgcactgcaaccacaaccagtgggccgccagccggtgccgcgggacggcgggccggcggcggctgcaggtcgtcgtggcgatgtcctcgtcggcgccgccgccgcctccgggatccgtgcagaagtcggaggaggagtgggaggccatcctctcgccggagcagttccgcatcctccgcctcaagggcacggagtatcctggaacaggtgaatatgacaagctcttcgctgagggtgtttatgaatgtgctggatgcgggactccattgtacaagtcatctactaaattcaactcaggttgtggttggccagcattctatgaaggatttcccggagccatcgcacgaacgcctgatcctgatggcaggcgaatagagatcacctgtgcggcttgcggaggacatttaggacatgtcttcaaaggggaggggttcaacacgcctacagatgagcggcattgtgttaacagtatctcactcaagttcattccagcctcagaagatagtaagctttga</cdnaseq>

Protein Sequence

<aaseq>MGVQHLLKLRMASPHPHPHPGAPLAARPLSALASFFLARPSSTA AAPPPRHVTLSCSRPHCNHNQWAASRCRGTAGRRRLQVVVAMSSSAPPPPPGSVQKSE EEWEAILSPEQFRILRLKGTEYPGTGEYDKLFAEGVYECAGCGTPLYKSSTKFNSGCG WPAFYEGFPGAIARTPDPDGRRIEITCAACGGHLGHVFKGEGFNTPTDERHCVNSISL KFIPASEDSKL</aaseq>

Gene Sequence

<dnaseqindica>30..397#2148..2304#2417..2581#agacgaaacacgccaaggaagaaaaaaaaatgggcgtccagcatctgctcaagctgaggatggcgtcgccccacccgcacccgcaccccggcgcgccgctcgccgcgcgcccgctctccgcgctcgcctccttcttcctcgcccggccctcctccaccgccgccgcgcctcctcctcggcacgtcaccctctcgtgctcgcggccgcactgcaaccacaaccagtgggccgccagccggtgccgcgggacggcgggccggcggcggctgcaggtcgtcgtggcgatgtcctcgtcggcgccgccgccgcctccgggatccgtgcagaagtcggaggaggagtgggaggccatcctctcgccggagcagttccgcatcctccgcctcaagggcacggagtaagacgtgtttcttcccactgtttatccttcttttccccttagaataaaaaatactagcgtaaagtcattgctaatttgctatctgtttctgtttccgtttctgataatgccaatttcttaaaactttgaatcagtatatactcggatcatgtatgagcatgtgtggaacggtgcatttccttgctactttgcaagagctctttcagaaatgacttgcctatgcatggttactggctctggacagccaaccatcctgtctctttattaatctgctcccgagtttccatctttttttttttttgccatgggtcaacagctgtaatgttatctagttgcatttctgggacatttttgcatgctgcaaacgtttctagatctgctaatgcaatttaaagtggttatgatttggccctgctcagctgtgaagtgtacagctgcacagccaaagctattcgcagtgggagcagcctcaaaaataatagccgaccaggccaattgattttaccaagcaaaagaagaaaaaacaaactaaaatgcttgtgatcagttgcgaagctaggctttaactatgaggggggcagcttaacaaatgattgtgataaaaaaaattgtataaaaagtattacataaattcaaagattttttatagatgataaaaaaaacatcagagctaaaagtctatataaattgacagtaattagaaaaaaaaaacttggcaaaattagcaacaaattgaaggactaatattccagaggtttaaaattaaaatgatgtgacaatagatatagttagtttcctaatcatcggctcaagcacaagaaaaacacgcacctatggctacagatttagtaggaaagtggaaactgatatgtaaactcacgatggctcccagtcatcatgtcgtgtaaactacaattgcttcttctaatacaatgacgtgcaatccttttgccagtttgtgaaaaaacataactctcatctgaatgactgaatgtacgttcttggaatggatgccttcctattttttgcattttgatgacataatgattttttgtgcacacaattgttcataaattaagtaccagctgtactttggatatcaaatggtagaattacatgtggaatttcatgtgtaacagtatctgatattttactctgaagacaaaatttatcagtttaccagcccgttactactggctgtgtatatacatatgattgtctaaaaaaatcagcttgttactatgatcctgtatgaaatgttaattttaggtttgtctctagacatatcctctttgtcttgagtcttgaccaggattgtatcttgctatacagacatagtactagtgcatgaacccttttctcggtaatatttcttttgtctactattcgaccaatatgttattgtctcattggacacagctgcatatcatgaagtgcagaatgtaagcgaaaaatagctcagccaaagttactaaagcgaagtcactacaaatgcttgttggttgtaaccaacttaccatcctttgaggcttgttttgttcctgatctgcaactgtagtcctgagtcctgacagttgagtaatgtaacaaaactgcaaaaagataattctgtacgaagttgcagtgctgatcctattctcattatcaacatttgtgttgtcgtacagttaacgaattactggtgtatgacatggttaatctggtagtcttgaactaattttttgatttgatctttttttttttccaggtatcctggaacaggtgaatatgacaagctcttcgctgagggtgtttatgaatgtgctggatgcgggactccattgtacaagtcatctactaaattcaactcaggttgtggttggccagcattctatgaaggatttcccggagccatcgcacgaacggtatggttttgtcttctacatcgaatggcgatgaatatatatggtgttttgttttcctctttcggtcgttccatactctcctactgatgctggcactattttgcaacttcagcctgatcctgatggcaggcgaatagagatcacctgtgcggcttgcggaggacatttaggacatgtcttcaaaggggaggggttcaacacgcctacagatgagcggcattgtgttaacagtatctcactcaagttcattccagcctcagaagatagtaagctttgagcatggaagtataagcccgcaatagaacagtctgcgcagtcatagtaaacctgtgattattaaaaaagtatcggatttttcagaaagcaatttatactctgcggtttgtcaataatgcgaaataccaagtctgatgattgtcgaaaacttttggctgtaacctatttacacttccagttctacttttttctgataaccagagaagttcatatccgtacataattgaacacggaagaaactatccgatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0404200, RefSeq:Os05g0404200