Os05g0406000

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0406000| Description = Conserved hypothetical protein| Version = NM_001062046.1 GI:115463822 GeneID:4338755| Length = 2076 bp| Definition ...")
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Gene Name

Os05g0406000

Description

Conserved hypothetical protein

Version

NM_001062046.1 GI:115463822 GeneID:4338755

Length

2076 bp

Definition

Oryza sativa Japonica Group Os05g0406000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19784758..19786833

Sequence Coding Region

19784759..19784852,19784945..19785160,19785819..19785861,19786325..19786403,19786525..19786617

Expression

GEO Profiles:Os05g0406000

Genome Context

<gbrowseImage1> name=NC_008398:19784758..19786833 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19784758..19786833 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gatgaagattctgcatttccagtttccaaatcgtcacaattatcagaaaccgcaagttcagtctcagaggaaagtagtcatgttgagccagatgtacccaggccaccccgtccacatgtatttttgccatcgtacaacagtacaccaagggttactcccccagactcacctccaaggagtttcgcgtcaatatcacctccaaggcggcattcaatttcaattacatcaaggaatttgtttgatgacaggtcctcggcctattctggtcatagttcagtgacatctccatttgatgcaggaagtcacacaggacgaacacgagttgatggaaaagagttcttccgtcaagtcagaaaccgtttgtcttatgagcagttcagtgcatttctagccaatgtaaaggagttgaactcacacaaacagaccagagaggatacactaaggaaggctgacgaaatatttggtccagataacaaggacctatacaccatctttgagggcctaattactcgcaatattcactag</cdnaseq>

Protein Sequence

<aaseq>DEDSAFPVSKSSQLSETASSVSEESSHVEPDVPRPPRPHVFLPS YNSTPRVTPPDSPPRSFASISPPRRHSISITSRNLFDDRSSAYSGHSSVTSPFDAGSH TGRTRVDGKEFFRQVRNRLSYEQFSAFLANVKELNSHKQTREDTLRKADEIFGPDNKD LYTIFEGLITRNIH</aaseq>

Gene Sequence

<dnaseqindica>2..95#188..403#1062..1104#1568..1646#1768..1860#agatgaagattctgcatttccagtttccaaatcgtcacaattatcagaaaccgcaagttcagtctcagaggaaagtagtcatgttgagccagatggtacattccattccatctcagttgattcacgttgttcaatgtgcaactccttttggtgataatttacataaagcacctttttatacttgcagtacccaggccaccccgtccacatgtatttttgccatcgtacaacagtacaccaagggttactcccccagactcacctccaaggagtttcgcgtcaatatcacctccaaggcggcattcaatttcaattacatcaaggaatttgtttgatgacaggtcctcggcctattctggtcatagttcagtgacatctccatttgatgcaggaagtcacacaggttagctgtgctagctcgaactaaatatctatgttcttgtttgcattgtaatttgctaatacttttgtgtgaaataaggaaccttcatatgtaggatgtattaatataaattttgtgagtaaattagtgaggctgagattcttcaaggacaaaaagctgactcaatcaaaatataccactgaaaattggctagtattctgctaatagagttctgtgttttcgtaatttagaacttataatatatataaaaggaggaaacctaacaaattgcctggtcatatgattcaatgaccatccatatgtgataaaggcttctatcaagtctcttgagtatttgcatgcaaaaaatatcgataatatctttttatgaattaatgaatgtcaaaatgcaatctagattccaaacagtcagtctacctttgtgaagaactagcaaactccattaaccatccattctgttgcactgatagtagagagctgaaatagataatctgcttgaagcaccagcattttaggacaaatgaaaaggattaattggtcagatagactggtaccagtctccagtgtagcttagggtttgatttctgactgagcatgctgatcatttccatgaatttagtagttctctatgtttattgtttgcgcgtttgttttccaggacgaacacgagttgatggaaaagagttcttccgtcaagtcaggtatgtggttttagatgaacatgactttggagagtacctctagctgtgccctttatgttgtgtaactttcctttagaaaaggatggaacatttgcttaggagttattgtaattccctaccttctcctagtccacttgtaaagttgcttaaggtctgccctgttgtgtttttttttcccaaaaagcttgacattataatgtacttgaagaaccacacaatattgcgctataggaattgtattaaccccggtccctgaagatccttttttcataaattgcaaaaacaaaattatggctgtcttgttgcttaaccaccagaaaagcaaccttttattgcaatagtcatggtgcacagttaacctccacattccttttgacttaaatttttgtgtgcatgcagaaaccgtcatggtgcacagttaacctccacattccttttgacttaaatttttgtgtgcatgcagaaaccgtttgtcttatgagcagttcagtgcatttctagccaatgtaaaggagttgaactcacacaaacagaccagagaggtataaaactatagaaactgcacttactgtatgttctactatatgtgaatctgtatctccctttttgtcctaggtttttcttctcttttggcgcttattgaagcttctgtgatgcttacaggatacactaaggaaggctgacgaaatatttggtccagataacaaggacctatacaccatctttgagggcctaattactcgcaatattcactagaatcctgaaaagtcaaaactggaacatttcttgtaattaaaagcggtccaggtttttttacaggaattatgagaaaaatacgtttggtactttttgtatttcagtggctactaatttcagatttctggtgtatagtttttaaaatttattcttgatgttaatgtagaatctgtaaggtatggttatatatgtaatacaaatgaaaaaaattggaat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0406000, RefSeq:Os05g0406000