Os05g0406800

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0406800| Description = Leucine rich repeat, N-terminal domain containing protein| Version = NM_001062051.1 GI:115463832 GeneID:4338760| Len...")
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Gene Name

Os05g0406800

Description

Leucine rich repeat, N-terminal domain containing protein

Version

NM_001062051.1 GI:115463832 GeneID:4338760

Length

2348 bp

Definition

Oryza sativa Japonica Group Os05g0406800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19835293..19837640

Sequence Coding Region

19836011..19837195

Expression

GEO Profiles:Os05g0406800

Genome Context

<gbrowseImage1> name=NC_008398:19835293..19837640 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19835293..19837640 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcggtgctcgcgcggctgggcgtcattgtggtgttgtgggcggtggtggcggaggggattcttgaccccgtcgacttcctggcgctgcaggcggtgcggcggtcgctcgacgatatgcctggctcgtcgttcttcgaagcgtgggacttcacggccgacccgtgcgggttccccggggtgttctgcgacggcaacaaggtgtcggcgctggcgctcggcgacccgagggcggggtcgccggggctgtccgggcggctcgaccaggcgctggggcggctgtccgcgctcaccgagctgtcgctcgtgcccgggcgcgtcgaaggcgagctcccggagtcgctcagctcgtgccggaacctccgattcttggccgtcagcaagaacctcatctccggccagataccggacggcctcggcgggctgtccaacctccggacgctcgacgtcagcttcaaccagatctccggcaccatcccggcgtcgatcgccacgctgccgtcgatcaccaacctcatcctctgccacaaccatctcaccggcggcatcccgtcgttcccggactcgtcgccgctcatccggctcgacctcaagcacaacgacctctccggcggcgtgccgaacctgccgagcacgctccagtacctctcgctctcggcgaaccggctcaccggcaccgtcgactccgtgctcccccggctcactcggctcaactacctcgacctcagcatgaaccagctcgacggcccaatcccggcgtccgtcttcacattgccgctgtccgtgctccagctgcagcgcaacttcttctccggcctcctccagccggcgaacgacgtgacgatccaggtggtggacctgagctacaaccgcttctggggccccgtgtcgccgctcctcgccggcgtggggcagctgtacctgaataacaaccggttcaccggcgaggtgccggcgcggctggtgcaggagctggtcggctccggcgggctccaggtgctgtacctgcagcacaacttcctcaccggcatcgagatttcgccggcgtcgtcgctcccctccagcgtctcgctctgcctcatgtacaactgcatggtgccgccggtgtacgcgccgtgcccgctcaaggccggctcgacgaacacccggccggccgaccagtgcccggagtggaggggctaa</cdnaseq>

Protein Sequence

<aaseq>MMAVLARLGVIVVLWAVVAEGILDPVDFLALQAVRRSLDDMPGS SFFEAWDFTADPCGFPGVFCDGNKVSALALGDPRAGSPGLSGRLDQALGRLSALTELS LVPGRVEGELPESLSSCRNLRFLAVSKNLISGQIPDGLGGLSNLRTLDVSFNQISGTI PASIATLPSITNLILCHNHLTGGIPSFPDSSPLIRLDLKHNDLSGGVPNLPSTLQYLS LSANRLTGTVDSVLPRLTRLNYLDLSMNQLDGPIPASVFTLPLSVLQLQRNFFSGLLQ PANDVTIQVVDLSYNRFWGPVSPLLAGVGQLYLNNNRFTGEVPARLVQELVGSGGLQV LYLQHNFLTGIEISPASSLPSSVSLCLMYNCMVPPVYAPCPLKAGSTNTRPADQCPEW RG</aaseq>

Gene Sequence

<dnaseqindica>719..1903#agtagtagtgggggcagtgggcgagttcttgctgcgagttcgtcgcgagagaggaagcagcagagagaaagagagcaaaagcagcgagaggttgtggggagagagaggagcgaattgattagtgtcgccacatcgtctccaccaccaccacctccgtccttcctcgccaagccaccatcattgcgccaccgccgcaagatctgagctcgactcctcctctcctcgcccccgcacgggcgcacgacgctagcttcttaagtatttttcttcttaccgcgcagcgcgcggcggctggctggctagctagcttctcggcaaaggcttgttgcggttgcggttgcagtacaggggcgtgtgtgcgcgcgagcggcggtggtacggtgcccgcacccacccaccaccacccccgccattaaaggcgctcacgcaccgcctccagcttcttcgtccacgagaaagcgaggtgatcagagagagagagagagagagagtgagtgaagcggagctcacttcctcccctcacgggagcagccaacgcccagcgccgccaccacccacgccgttcgcgcgctttaaagaaggcgcgccaccttcgcataagcttaaaagattccccacaccacctcctctcacctcgcgccacgagcgttgatcggtgcttttcattgttcttccttgctgcagaagagacagagagagggagaggcagaggacgaggatgatggcggtgctcgcgcggctgggcgtcattgtggtgttgtgggcggtggtggcggaggggattcttgaccccgtcgacttcctggcgctgcaggcggtgcggcggtcgctcgacgatatgcctggctcgtcgttcttcgaagcgtgggacttcacggccgacccgtgcgggttccccggggtgttctgcgacggcaacaaggtgtcggcgctggcgctcggcgacccgagggcggggtcgccggggctgtccgggcggctcgaccaggcgctggggcggctgtccgcgctcaccgagctgtcgctcgtgcccgggcgcgtcgaaggcgagctcccggagtcgctcagctcgtgccggaacctccgattcttggccgtcagcaagaacctcatctccggccagataccggacggcctcggcgggctgtccaacctccggacgctcgacgtcagcttcaaccagatctccggcaccatcccggcgtcgatcgccacgctgccgtcgatcaccaacctcatcctctgccacaaccatctcaccggcggcatcccgtcgttcccggactcgtcgccgctcatccggctcgacctcaagcacaacgacctctccggcggcgtgccgaacctgccgagcacgctccagtacctctcgctctcggcgaaccggctcaccggcaccgtcgactccgtgctcccccggctcactcggctcaactacctcgacctcagcatgaaccagctcgacggcccaatcccggcgtccgtcttcacattgccgctgtccgtgctccagctgcagcgcaacttcttctccggcctcctccagccggcgaacgacgtgacgatccaggtggtggacctgagctacaaccgcttctggggccccgtgtcgccgctcctcgccggcgtggggcagctgtacctgaataacaaccggttcaccggcgaggtgccggcgcggctggtgcaggagctggtcggctccggcgggctccaggtgctgtacctgcagcacaacttcctcaccggcatcgagatttcgccggcgtcgtcgctcccctccagcgtctcgctctgcctcatgtacaactgcatggtgccgccggtgtacgcgccgtgcccgctcaaggccggctcgacgaacacccggccggccgaccagtgcccggagtggaggggctaatcaaagctggcaacacaacgccgacgccattgccggatcgcctcggatcgtccaagctcaagaaaaccggaaaagaatggaggagattgcaaatggcggtctccgattctttgattaatttgtccagttactagcgttccaatgtggattactattctttttggttggggggagatggatggagatagtcacagacaagaagtaagttccttaataatcttgggtttataggcgtaatttctttctcctttttttgtgtttaggtggtgtatgttcttttgtgtcccctgctgtatagttgcgtgagtagtaaaacattggctcttgatgttatgtgaggtggcgacgatcgattgatgtatctgatgatgatcatgatgatggtggtgttagaaatctgtgatgttatttatatatcgcattgccattgggcaagcatagtatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0406800, RefSeq:Os05g0406800