Os07g0573300

From RiceWiki
Revision as of 20:38, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0573300

Description

Similar to FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate 5-kinase) (PIP5K) (PtdIns(4)P-5- kinase) (PIKfyve) (p235)

Version

NM_001066601.1 GI:115472934 GeneID:4343683

Length

3882 bp

Definition

Oryza sativa Japonica Group Os07g0573300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23829926..23833807

Sequence Coding Region

23830985..23831050,23831161..23831292,23831872..23832006,23832381..23832446,23832534..23832644
,23832974..23833066,23833292..23833396,23833489..23833566

Expression

GEO Profiles:Os07g0573300

Genome Context

<gbrowseImage1> name=NC_008400:23829926..23833807 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23829926..23833807 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttgatcccagcacaagcaggacactaaggatttatccccttgatacactgacaagatgggatgttttagattcaaccgtatttgcattttgggcgaagactccagttgattttgaagcaaagcgaataaggttgaagtcaaacagctatacctccaatactttgcttgacactgtgactgcagcaacagtgcagtttaaggagattggtggagatgcaagaggcagaggaactgtagacagtagcaaacccatgtcacaatcaaatgagaagaagaaaggttttgattggatgtttgcaaaacctgttgacgaagtgaaagaccattgggttccagatgaggctgcgaagaagtgctactcatgtgctgttgattttagtccttttaaccgcaggcatcattgtaggaactgtggtgaaatattctgtgacaaatgcagtcaaggaagaactgctctgactgctgaagataatgccccgcttgtccgagtttgtgatagatgcatggcagaagtctctcaaaggcttagcatagcacaggaagctgccaacaggtctgccacagtgcaaagtcatgaagatcttgcaagaaaacttaaggaggaaatggagagaaatcgcaagtcctcgggttctgcatctggaggttcatctgggaccagaatgagggaagttgcatgtcctacttgcactgtccatcttcaggttcaggttccaacctctggctcagaaacagtggaatgtggggtatgccagcatgctttccgtgtcagcgccaattga</cdnaseq>

Protein Sequence

<aaseq>MLDPSTSRTLRIYPLDTLTRWDVLDSTVFAFWAKTPVDFEAKRI RLKSNSYTSNTLLDTVTAATVQFKEIGGDARGRGTVDSSKPMSQSNEKKKGFDWMFAK PVDEVKDHWVPDEAAKKCYSCAVDFSPFNRRHHCRNCGEIFCDKCSQGRTALTAEDNA PLVRVCDRCMAEVSQRLSIAQEAANRSATVQSHEDLARKLKEEMERNRKSSGSASGGS SGTRMREVACPTCTVHLQVQVPTSGSETVECGVCQHAFRVSAN</aaseq>

Gene Sequence

<dnaseqindica>1060..1125#1236..1367#1947..2081#2456..2521#2609..2719#3049..3141#3367..3471#3564..3641#gatctccctcacgaagcaaccccagccttctttacctttcccgggccgtgtcgcccacgcgattcccttccctccaatcgaatcacgtcgccgtcctcctccgcctccgccgccgccaacctcgtcggcgccgccctcggatccacgccgcgcgatgcagcacggagactacgcctcctcggcccccccggctgcgggccactactacccgcaccagttcgcgccgaatccgcctccgcacccggcctcctccgccgccgacgccgcgccgccgacgatcccggcgagctacgcctccgcgccgccctactcggtgggagggtactccgatcagccgccgtcggccccgtcctacgcgccgccgccccagtacgccgggtacgcgccgccctacaacaatcccaaccccgcgccctacccaccggagtcgtccccggcgccggcgccgtactacagctacccgccgacggcggcgggggtggccacgcagcatgctccggcggcggagcccagccccgcgccgctgccctacgacgccccgtactacggaggctaccagccgcctcctaccgcggggtacggcgacgatgattacctgaacgagggcgcctacgcgtatagcggcgacggcggctccgagccgtacggggcgcgcggcacggcgccgacgcggtcgggtgccgcgatgtttgatgactacggccggtcgattgggccctcgtcgggaggggcggaccagtggcccaccggtggcggcggcggtgtgggtgggagctttgggaaaattgcgagggctgttccaaaagcagagtctcatgaggatgctaacggtggtgcgcagaagtttcgggttaaactgctgcctgagggtgccgggagccctaccgatgtgctttgtcaggtatgataggattggtcaaattatacatcacacatgcaaaatttagagtaatgatgtttgaaactttttagattatgcgctagagtgaccttggtagttccaatatgcctttaacatgtttatttttgctgttgcagattggtctggatggaattcgcatgcttgatcccagcacaagcaggacactaaggatttatccccttgatacactgacaagatgggatgtaagtgcgacatccttttgcagaggattatgtgtatatcttcttactacaaaatacaatggcaatgttgtttttctaatggacggttcatggttgtggtgcttggttaggttttagattcaaccgtatttgcattttgggcgaagactccagttgattttgaagcaaagcgaataaggttgaagtcaaacagctatacctccaatactttgcttgacactgtgactgcagcaacagtgcaggtgatcatcttcctccattatcaatcgctatttaccctcattttaagattcttaggtttagacttgctttgctctgtaacacactaacaccactactaatagctgcttttggtgaaaaagtgttaattagaaaaaccaaagcgatgaatatttgaatttgaaccaatacttaggaaacagcaaaatatgacttatatcatgaatgtctctcttctccaaaatattactagaaatcaatatgtcatactgcggcgagtatgatgccatataagttggctaacttggataccaccttattactctgtttgaattatattccaatattctgtgtttgaattactctcttgtatattgatgaatggaatataagttgctaacttggattccacattgattggcagtatcctttcacaatatttgtagaaactagttttttttttaaagaaaaggttttgctccaacatatttttcttgatagattttgttcacggagttgctcatacattcagcatatttaatgcttcttcttttttttttacaaaacattcacattttttaactttgtgaaactacttacagtttaaggagattggtggagatgcaagaggcagaggaactgtagacagtagcaaacccatgtcacaatcaaatgagaagaagaaaggttttgattggatgtttgcaaaacctgttgacgaagtgaaagaccattgggtaagttgaattgctgcgacacacatttactacttgatcttagttacaagaatgctggaacctttttagtttattatttgtttacttgcattgttccacttcttatttttgataattttcttgcaatatctgctcttccctgcgaatgcatgtagtttggccccttttttgaagtgtatatagtttaccctttgattagtcctttacatgacgatacactctgtaaccattttggttgagcatttcagcatataatgaagaccacttcagttcacttagcagtactgttgctctagccactgactgttttgccatcttgtaccaccattttgttaatcttatgatcgtgtttcttctctttatcccctttctaggttccagatgaggctgcgaagaagtgctactcatgtgctgttgattttagtccttttaaccgcagggtaatttgaatactctttgttcggatatacttatttgttacttttatgatgatattttgataaattaagatgatgttttctttgcagcatcattgtaggaactgtggtgaaatattctgtgacaaatgcagtcaaggaagaactgctctgactgctgaagataatgccccgcttgtccgagtttgtgatagatgcatggtacgttctgcttcttgtttcttaattatatattctttcttttgcttgatgttatcttaggtatagttacttagctcattttaagcatagcttgactgtgttacttcttggttgtatttctcttgttttccaaagcgagcacagctcgcataacctctgcagcaactcacctattgtctgttgctctacttatacatgctttagcagttttatcactgaccaaatggaaaacatagtaaaatttgaatagctgtgcactatagctcttcttggcgagtttcaattcagtgccatgtgttcatacgttagaatgtttcttattctctcaggcagaagtctctcaaaggcttagcatagcacaggaagctgccaacaggtctgccacagtgcaaagtcatgaagatcttgcaagaaaacttaaggtgacgtactagataacacttcctctatattatacattcattggagtgacttgtacacttgacggattaattgagcatgatttgttggaatgtaagagttgtaaatgtttgttggcacatgttttgccgccaaaattttagtccctaacatcttaggtgccatcaggaaatttcagcatgttctatgagtctgtgatcttaacaaatttatgctttgatcaacaggaggaaatggagagaaatcgcaagtcctcgggttctgcatctggaggttcatctgggaccagaatgagggaagttgcatgtcctacttgcactgtccatcttcaggtcggtctgactttaggcactcaaatgtgaatgctcttacagtaatgacttcgtttggcgcttacatactaacagtggatgtgcaattgcaggttcaggttccaacctctggctcagaaacagtggaatgtggggtatgccagcatgctttccgtgtcagcgccaattgataaaccgggagacagagcatgtctatagcaattattctgtttataactcacttattttgctgttccatacataataagcgtgtgtgcagcctgtagatatttcctggttgtgttggtgaccatgacaggatatactaggtttttcttgtacatgggttaatcctaaaatatatgctctaatactgctgaaattgaaacatgcttggatgtctctggagaatatcaaagaaacattcgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0573300, RefSeq:Os07g0573300