Os05g0408900
| Gene Name |
Os05g0408900 |
|---|---|
| Description |
Similar to 1-D-deoxyxylulose 5-phosphate synthase |
| Version |
NM_001062059.1 GI:115463848 GeneID:4338768 |
| Length |
5872 bp |
| Definition |
Oryza sativa Japonica Group Os05g0408900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:19963984..19969855 |
| Sequence Coding Region |
19964237..19964398,19964522..19964806,19964908..19965189,19965282..19965589,19965712..19965985 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:19963984..19969855 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:19963984..19969855 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgctcacgacgttctccatttcgagaggaggcttcgtcggcgcgctgccgcaggaggggcatttcgctccggcggcggcggagctcagtctccacaagctccagagcaggccacacaaggctaggcggaggtcgtcgtcgagcatctcggcgtcgctgtccacggagagggaggcggcggagtaccactcgcagcggccaccgacgccgctgctggacacggtcaactaccccatccacatgaagaacctgtccctcaaggagctccagcagctcgccgacgagctccgctccgacgtcatcttccacgtctccaagaccgggggacatctcgggtccagcctcggcgtcgtcgagctcaccgtcgcgctccactacgtgttcaacacgcctcaggacaagatcctctgggacgtcggccaccagtcgtaccctcacaagattctgaccgggcggcgcgacaagatgccgacgatgcgtcagaccaacggcttgtcgggattcaccaagcggtcggagagcgagtacgactccttcggcaccggccacagctccaccaccatctccgccgccctcgggatggcggtggggagggatctcaagggagggaagaacaacgtggtggcggtgatcggcgacggcgccatgacggccgggcaggcgtacgaggcgatgaataacgcggggtatctcgactccgatatgatcgtgattctcaacgacaacaagcaggtgtcgctgccgacggcgacgctcgacgggccggcgccgccggtgggcgcgctcagcagcgccctcagcaagctgcagtccagccgcccactcagggagctcagggaggtggcaaagggcgtgacgaagcaaatcggagggtcggtgcacgagctggcggcgaaggtggacgagtacgcccgcggcatgatcagcggctccggctcgacgctcttcgaggagctcggcctctactacatcggccccgtcgacggccacaacatcgacgacctcatcaccatcctccgcgaggtcaagagcaccaagaccacaggcccggtgctcatccacgtcgtcaccgagaaaggccgcggctacccctacgccgagcgcgccgccgacaagtaccacggcgtggcgaagttcgatccggcgacggggaagcagttcaagtcgccggcgaagacgctgtcgtacacgaactacttcgcggaggcgctcatcgccgaggcggagcaggacaacagggtcgtggccatccacgcggccatggggggaggcacggggctcaactacttcctccgccgcttcccgaaccggtgcttcgacgtcgggatcgccgagcagcacgccgtcacgttcgccgccggcctcgcctgcgagggcctcaagccgttctgcgccatctactcctccttcctgcagagaggctacgaccaggtggtgcacgacgtggacctccagaagctgccggtgaggttcgccatggacagggccgggctcgtgggcgccgacgggccgacgcactgcggcgcgttcgacgtcacctacatggcgtgcctgccgaacatggtcgtcatggccccgtccgacgaggcggagctctgccacatggtcgccaccgccgcggccatcgacgaccgcccctcctgcttccgctacccaagaggcaacggcatcggcgtcccgctaccacccaactacaaaggcgttcccctcgaggtaggcaaagggagggtactgctggagggcgagagggtggcgctgcttgggtacggttcggcggtgcagtactgcctcgccgcagcgtcgctggtggagcggcacggcctcaaggtgaccgtcgccgacgcgaggttctgcaagccgctggaccaaacgctcatcaggaggctggccagctcccacgaggtgctcctcaccgtcgaggaaggctccatcggcgggttcggctcccacgtcgcgcagttcatggccctcgacggcctcctcgacggcaaactcaagtggcggccgctggtgctacccgacaggtacatcgaccacgggtcaccggcggatcagctggcggaggcagggctgacgccgtcgcacatcgcggcgacggtgttcaacgtgctgggccaggcgagggaggcgctcgccatcatgacggtgcccaacgcgtag</cdnaseq> |
| Protein Sequence |
<aaseq>MALTTFSISRGGFVGALPQEGHFAPAAAELSLHKLQSRPHKARR RSSSSISASLSTEREAAEYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSDVI FHVSKTGGHLGSSLGVVELTVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTM RQTNGLSGFTKRSESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMT AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPL RELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNID DLITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPA KTLSYTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAV TFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHC GAFDVTYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVPLPPNY KGVPLEVGKGRVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADARFCKPLDQ TLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGS PADQLAEAGLTPSHIAATVFNVLGQAREALAIMTVPNA</aaseq> |
| Gene Sequence |
<dnaseqindica>5458..5619#5050..5334#4667..4948#4267..4574#3871..4144#1032..1303#790..940#370..675#160..282#atcttgctccactacgcggaccaccgcgcgcgagcagagcatctcctcactctctagcttgctccagtttcgcgtagctgcgtgacagttcaattgaactctctggattcgttggttacttcgtctgagctgctgcagcgttgaggaggaggaggagcaatggcgctcacgacgttctccatttcgagaggaggcttcgtcggcgcgctgccgcaggaggggcatttcgctccggcggcggcggagctcagtctccacaagctccagagcaggccacacaaggtctgtgtggtcgattgctgctacggtactgggctattggctctgttcttacgctatggtttgttgttgctgcattcgccattgcaggctaggcggaggtcgtcgtcgagcatctcggcgtcgctgtccacggagagggaggcggcggagtaccactcgcagcggccaccgacgccgctgctggacacggtcaactaccccatccacatgaagaacctgtccctcaaggagctccagcagctcgccgacgagctccgctccgacgtcatcttccacgtctccaagaccgggggacatctcgggtccagcctcggcgtcgtcgagctcaccgtcgcgctccactacgtgttcaacacgcctcaggacaagatcctctgggacgtcggccaccaggtaacccttcgctcttagctccggtcggacaacgtgcctcgccatgtgagggtgcttcgaagctcggagacaaggcctgaccaacccacccactttctttattcaccaacgcagtcgtaccctcacaagattctgaccgggcggcgcgacaagatgccgacgatgcgtcagaccaacggcttgtcgggattcaccaagcggtcggagagcgagtacgactccttcggcaccggccacagctccaccaccatctccgccgccctcggtaacctcctcttcttcctccagtctctctgcatcgagctgtaaattctctgtgaaactgacctacaggccggcgtacgtgagattggcagggatggcggtggggagggatctcaagggagggaagaacaacgtggtggcggtgatcggcgacggcgccatgacggccgggcaggcgtacgaggcgatgaataacgcggggtatctcgactccgatatgatcgtgattctcaacgacaacaagcaggtgtcgctgccgacggcgacgctcgacgggccggcgccgccggtgggcgcgctcagcagcgccctcagcaagctgcagtccagccgcccactcagggagctcagggaggtggcaaaggtaaggcctcacaagcgttcaacgctcacgctcgattgcccactgcccagaaaggcacgtgaatgaaaaagaaaagggaagacaaaaaaacaaaaaatagtgtcgccggataagcgtataactactacgaaatgcgccaaatttttaacgggttttagaatgaaaccgtctagtttttacctaaattttaaggacacgttcgcttgtccagagagcagaggggccttacgaaatttgaaggcgaccgtggaaattagtgaggaaatagtgacaatttaacttgcgtccagcagcagcaatcaacagtgttaagagtacgccgttagcaaacgtgtcagtgtctcgctcgctttttcaatttcaattgcatgttgtttgatgcttgcgtcgcatacattccaaaataagctgtgtcagacatgggctagttatacgtgtctcgcatggatccactcaccacaaaagaaaatggcgatgaaatctatatgcttcagtcaataaactagtaggagtactattatagagtacagtagtaccgcacacaaaccataacacatttgtcctttacaaagcagcttaagccagtatctcaacaagtttgagacgtctcttaagaaccaaaatattagagtatttcaagagtacaattggaccatactgcgtgttctctatgcacgcttgaaacataggcatcagattaatcctgaagtacaaacacacgcataccccactgaagcatatacatgttttctatgtcgtccaatcttttcctttttacggattcaattatcaaggacatgctttcaaagcttctaaacggtccaattttttaaaaaagttctacatataaatgtaatagttaattcattcatctgttcctttaaatattatcacaaaatcagataatccatcatccattgagccctttcaaactgggctgatgtttgggcttaaaagaaggggttgctatacaacggaatcccattgggacaggataatatcggttagatatcaggtcctaatacctctgaggtaacatgtcctgatatataactggtaggtgatacctataaggtatcaggcgatttctaccacatatcaggtgatacttgcgaaatatcaggtgaaacctgtcaggtatcaggcgattcctaccacgtatcatgtgatacttatgaactaacaggtgaaacctgtcaggtatcaggcgattcctaccacgtattaggtgatagttgtgaaatatcaagtgaaacgtatcaggcgattcctaccacatattaggtaatgcttgcgaagtgtcagctgaaacttgtcaggtatcaggcgattcctaccacgtattaggtgatacttgcaagatatcaagagccgggcaccaaagcgtcgtcgccggtggtaccaccgtccacgtctcacgccggagcttgtcgccggtggcagcatcctccacagtccacgctatgtcagagctaggtgatacttgcaagatatcaagagccggacaccaaagcgtcgtcgccggtggtaccaccgtccacgtctcacgccggagcttgtcgccggcggcagcatcctccacagtccacgctatgtcagagctcattgccggcggcggcgtcctctgtcatccacacttcacgctagagctagtcgccgacggccgcgtcctccaccgtctacgccacgtcaaagctcgttgccggcggccgcgtcctccgtcatccacgcctcacgccggaggtcaaagctcgttgccggcggccgcgtcctccgtcatccacgcctcacgccggagctagtcaccgacggccgcatcctctgtcgtctacgccacgccatagctcttttctggcggccgcgtcctccgtcatccacaccccacacccgagctcgtcgcggcagccgcgtcctccatcatccacgccccacggcccacgcggagctcatcgttgatggccgcatcctcctctgtccacgccacgtcagaactcgttgatggcggccgtgtcctccttgctccgcgactattcactccggcgacagctctgtccccggccgtcgcgacaacccacgtccatcaattccgacaccgagctcgtgctgctcctcaatgcgtcaccactcttcgatttagcgacggcggccaagccccgcgcgacgccgccgtcctcagctggcgcgagtagctgtgcagcgcgacgatgacgtgcacgacgtcctacaatgactcacatcgcgccgcaaccttgcgcgaaatatcctgtctcagctgcaacgccgccgtgaaacctggttgtggctattcttatccataagcgcgtgaggctgggagaggatgacgatcctgtcctgaacgttagcaacggtatcccggtatttagcattcccgtaaaagaaacgttggctgggccagtcaaatttgctcttttgggctggaaaagaatccccagacgaaccagcccagatcctatgtgggctaaaagacacacctaaatgaaaggtcggcccagttaatacaattttgacaccctactcttcttctgtgcgcgcgcgtgtgaatccagggcgtgacgaagcaaatcggagggtcggtgcacgagctggcggcgaaggtggacgagtacgcccgcggcatgatcagcggctccggctcgacgctcttcgaggagctcggcctctactacatcggccccgtcgacggccacaacatcgacgacctcatcaccatcctccgcgaggtcaagagcaccaagaccacaggcccggtgctcatccacgtcgtcaccgagaaaggccgcggctacccctacgccgagcgcgccgccgacaagtaccacggtgagaatcccaaatcgtcgtgacctcctgcgtttcttgttgaaatgtttgaatcatcatgcgtgagaccaaccgcgggcgattgatcgagtttggtgtgttcttggtgatcgatgatgcaggcgtggcgaagttcgatccggcgacggggaagcagttcaagtcgccggcgaagacgctgtcgtacacgaactacttcgcggaggcgctcatcgccgaggcggagcaggacaacagggtcgtggccatccacgcggccatggggggaggcacggggctcaactacttcctccgccgcttcccgaaccggtgcttcgacgtcgggatcgccgagcagcacgccgtcacgttcgccgccggcctcgcctgcgagggcctcaagccgttctgcgccatctactcctccttcctgcagagaggctacgaccaggttcgccattcttcacaccatctcgatcgatctctgctttcccgtaccgccgtacgccattgctgacgacgccgtcgttgctggctgaacaggtggtgcacgacgtggacctccagaagctgccggtgaggttcgccatggacagggccgggctcgtgggcgccgacgggccgacgcactgcggcgcgttcgacgtcacctacatggcgtgcctgccgaacatggtcgtcatggccccgtccgacgaggcggagctctgccacatggtcgccaccgccgcggccatcgacgaccgcccctcctgcttccgctacccaagaggcaacggcatcggcgtcccgctaccacccaactacaaaggcgttcccctcgaggtacgacgcacatacgtacactccatggccggcttctctcggagaccaatgcatgcaaatatctcacagctggccggcgccggtcgccggagttttggcaggtaggcaaagggagggtactgctggagggcgagagggtggcgctgcttgggtacggttcggcggtgcagtactgcctcgccgcagcgtcgctggtggagcggcacggcctcaaggtgaccgtcgccgacgcgaggttctgcaagccgctggaccaaacgctcatcaggaggctggccagctcccacgaggtgctcctcaccgtcgaggaaggctccatcggcgggttcggctcccacgtcgcgcagttcatggccctcgacggcctcctcgacggcaaactcaaggtaattttcgtctcgctattgaccaacatcccgtcttagaatactaccagtagagaataccgtgacgtaaacgtatcggtgtgtgtaaggacaggtcctgatgtttgtgtttgattggtgcagtggcggccgctggtgctacccgacaggtacatcgaccacgggtcaccggcggatcagctggcggaggcagggctgacgccgtcgcacatcgcggcgacggtgttcaacgtgctgggccaggcgagggaggcgctcgccatcatgacggtgcccaacgcgtagcagatgcgtggcgcctctggtagagacaatgctttgtacatgtagagatcagtgaattgtatattagtcggcgtcgggataaatattgattagtgatgctgaggggaacagttacagtttttttgctcttcagttgttcgtggacggagacccggctgctcgatgttcgatcgcttgtatatctaagaaatgttgtaagtggatagatttattgatcatgataaggattagtcgggtattaattgaaagcatc</dnaseqindica> 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| External Link(s) |
