Os05g0409300

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0409300| Description = Similar to Cysteine protease inhibitor| Version = NM_001062062.1 GI:115463854 GeneID:4338771| Length = 3887 bp| Def...")
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Gene Name

Os05g0409300

Description

Similar to Cysteine protease inhibitor

Version

NM_001062062.1 GI:115463854 GeneID:4338771

Length

3887 bp

Definition

Oryza sativa Japonica Group Os05g0409300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19990591..19994477

Sequence Coding Region

19990655..19990879,19992940..19993165,19993552..19993640,19994166..19994180

Expression

GEO Profiles:Os05g0409300

Genome Context

<gbrowseImage1> name=NC_008398:19990591..19994477 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19990591..19994477 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttcgccgccgcggcttctgctgctgctccggcgcacccgccgccgccgccgccgccttgctcctactggccgtggcggcggccgccccccgcgccgccgggttccacctcgggggcgacgagagcgtcctcgtgcggggcatgctcgccgcgatccgccgcgagcaggccgaggcggaggacgcggcgcgcttcgccgtcgcggagtacaacaagaaccagggtgctgaattggaatttgcacggatagtgaaagccaagcgtcaagttgtgactggtaccttgcatgacctgatgttggaggtagttgattctggaaagaaaagcctgtatagtgcaaaggtatgggtgaagccgtggctagattttaaggcagtcgtcgagttccgtcacgttggggactcccagtcacagtcggccactgctgctgatgataacgctgggcaagatactgctgatcccactgtggcatcaaggaacgacctgcacaacactgagaacaataaagtctctgttgtcctgtcaaccttttctcagacatactcggtgtga</cdnaseq>

Protein Sequence

<aaseq>MLRRRGFCCCSGAPAAAAAALLLLAVAAAAPRAAGFHLGGDESV LVRGMLAAIRREQAEAEDAARFAVAEYNKNQGAELEFARIVKAKRQVVTGTLHDLMLE VVDSGKKSLYSAKVWVKPWLDFKAVVEFRHVGDSQSQSATAADDNAGQDTADPTVASR NDLHNTENNKVSVVLSTFSQTYSV</aaseq>

Gene Sequence

<dnaseqindica>65..289#2350..2575#2962..3050#3576..3590#ccggagaggaaaggaaagctcgggatcggagcagtagtagtactaggacgactcaacgacgacgatgcttcgccgccgcggcttctgctgctgctccggcgcacccgccgccgccgccgccgccttgctcctactggccgtggcggcggccgccccccgcgccgccgggttccacctcgggggcgacgagagcgtcctcgtgcggggcatgctcgccgcgatccgccgcgagcaggccgaggcggaggacgcggcgcgcttcgccgtcgcggagtacaacaagaaccaggtccgctttctgcgccttcccctcgagttcaattccgttggattttcttttatttagttcttataaatcggagaaccgcatcagcttacgcagatataggtctactagtctccttacaaacaggttaaattaggtccatgaaccggagtagattgcattatctcgcgagagcgcttcactttatcacttaggtctggtcagcgcggtgcagatttaagacattaatctactgctgataatgttagaatcactagctagtcctggttccgttgacttaagtaggaacatacgatttgtgcaatgaaattgttggaatcgtatagaaccttggcaatttgatgtttttgcttcaagctgtaaacagctagcactgatcaatgatgatcacacaattatgcgtgtgccttatttgcgactatagtatcgtgccctgttgttctgagttacttttcttttttaagataagttgggttttttttgggtcaaatgttccttttcttttttaagatatggaagatgagtaatactaacatttacagcctctgcatttggtgcatcgagccgaaaccgtagtaagcggttggacaaaccccaacctgctagaaaactgaaacatgctagtagtaaaaaaaatctagaaagcactaaactgggaggctagaccaaaaaaggagcataaccaataattaacaagcctaagtgagctgtatcatccaatgaggctattagatccttggcttgcctccatggaaactgaattttaaggggacaattgtatccatgcccccacttttaacctcaactgttgttttaccctcactttttagggtttgcaattttactctcactttttgaaaacgaggaagccggttgccctcagttttgacgcctggtttgacggtgttagttctagggcgaaaggacatttatatccttggtggtggttgtattttttccttatatcttcctgttaacttcttccttgaaaatctattgataggatttcgggcctgtttggttggtgccttcagcaacatgcctaataaatttgtgtgcctgagagacatgagtgcttgcccggtcaggtagcctgagaatgaacttgttcatggcaagaaacaaatctgagcataactgcaccttctctccaaccaaaataattgtactgtctagcctcccatgaaaaagtcattcgtgaatcaagaaaagaaaaagaaaggagaacacgaggaaagagatccccaaatcaacggatttgcaacaagaagagaaggaaggagaatacaaggaaattaagaaaatccccaaatccaatacagttgcaaaaaaaaaaaaaccatccattatttctccgatctgcatgtgctaagcaaaaatcgaaggatgacaaagatccaacagtaattgcttcgtgttgacggccagatcgagcaaagcaacagagatgacggcatcatgagaaaacggcggtttcgatcgatgacggaagcggcggtggcggctgcttcactcgaccgccactcgccgggcctgggagtggacaccacgggaagccccgcgactgccgacccgccggagactcgccgcgtctggccaccacgctcgtcgccgcacgcacgccgacgtctctaggtctcgggttgttcacggttcaccacgaccaatggttgactcggtggggaggagaggtgaaagatccctatccattcactcaggggtataatggtaaattaatattttgtaaataaatttttcattgccatttgtatttctttaacccaaaaacgtgggacccacctaactgacgtcaaaactgggggcaaacggctggttcgctttcaaaaagtgagggtaaaattgcaaaccctaaaaaatgggggtaaaagtgtaaaacggtcagtagttgaggttgaaagtgggggcatggatgcaattgtccaaattttaagatgctctctgcagatcttctggaatattgtgacgtttcctcttgtacgcaggatgaattcttcatcaagtatttgttcttgatttcttctaattttaatcttgtttctcagggtgctgaattggaatttgcacggatagtgaaagccaagcgtcaagttgtgactggtaccttgcatgacctgatgttggaggtagttgattctggaaagaaaagcctgtatagtgcaaaggtatgggtgaagccgtggctagattttaaggcagtcgtcgagttccgtcacgttggggactcccagtcacagtcggccactgctgctgatgataacgctgggcaaggtatgtttcatctcattacgtttctggaatagtttcggtaataatgctgagtgttctctacattactgaagaacttcttatgcggacaggatgacagttgtatattcttttaagttttgagcaacttccccattaattacgtatctaatgtataattttctaggaattaaagcgagtgcaggaaaaaaatatttaaatgatatgacttgtcatgttggcctgataataactcctgaaaagcttccctaaaaacaaaattctgaaaagctagaaacttggtattgtttggcaaaccttcatatcgtgtgttttctgatatatgaatttcatatcatccggttcaatctactggggagaaagataactcgtaccagttgtttttccagatactgctgatcccactgtggcatcaaggaacgacctgcacaacactgagaacaataaagtctctgttgtcctgtcaaccttttctcaggtattgtccttcatccatctcatgcttttatggaactcattattaatgcaatttctatcagtttgctgattggtaagcctgcttgtcaacttctagcgcatgttaatgggttaatctttggcttgatttatagatagtaagaaataatggctttgcatgatgtcctgaatcctgattcaggctaatccttaaaaatttattctgatgcaggctaatccttaaaaatcttgagaaagaacttcattttaaagcacttgcattgtgtagctctgttttgtatatttggtttggtccttcggcatatgtggtataccgtactacgtcctgttcaaagagagactcccaggatgcatgcagtcagaccacataatttctgaataagcatatgatctaaatatgtagttttgattatgagaatgatgagcattttgtgtaaaagtaggaacatttttcatactgcatttgcttcttttggttcattgtgaacaaatcttgacttacagtttaactcatatttactttcagacatactcggtgtgaatctagctccatggagaggatatggaagacttgagcttctgagagctagctgtcagtaatttgtgaagtaaagtagctgttatccttttgtgaagttttccccactgttatggaatgatgtctagatcgtaatatgccgttgagcagacatgagtttgacatctggagtgtatatttgttgctgcaaactgcaaagtgaacactcccatgtatattccatacctttcgttcccatgcatgtatataaggcattactgctaccgttgtatggtatacccgctgcatgtgtttgcattt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0409300, RefSeq:Os05g0409300