Os05g0409500

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0409500| Description = Similar to MtN21 protein| Version = NM_001062064.2 GI:297604497 GeneID:4338773| Length = 1678 bp| Definition = Oryz...")
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Gene Name

Os05g0409500

Description

Similar to MtN21 protein

Version

NM_001062064.2 GI:297604497 GeneID:4338773

Length

1678 bp

Definition

Oryza sativa Japonica Group Os05g0409500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20004614..20006291

Sequence Coding Region

20004614..20004902,20005000..20005151,20005249..20005407,20005522..20005891,20005999..20006291

Expression

GEO Profiles:Os05g0409500

Genome Context

<gbrowseImage1> name=NC_008398:20004614..20006291 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20004614..20006291 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtggcgcagcagcagcagcagcagcagaggcaggccaccggtgagtcgctgatgcagaagtgcaagccgtacgtggcgatggtctcgctgcagttcgggtacgccggcatgaacgtgatcaccaaggtgtccctcaaccacggcatgagccactacgtgctcgtcgtgtaccgacacgccttcgccaccctctccatcgcgcccttcgcgctcgtcctcgagcgcaaggtccgccctcgcatgtccttctgggtcttcctccagatcttcgtcctcgccctcctcgggccggtgatcgatcagaatttctactacgccgggctcaagttcacctcgccgaccttctcctgcgccatgagcaacatgctcccggccatgaccttcgtcatggccgtcatcttcaggatggagaaggtgaacctgaagaaggcgaggtgcgtggcgaaggtggtgggcacgctcgtgacggtggccggcgccatgctcatgacgctctacaaggggcgcgccgtcgagatggtctggaccaagcacatgcacctccacggcccgcaccaggacgccgtcgccgccgccgccgccgacaaggactggctcaggggctccatcttcctcatcatcgccaccctcgcctgggcctccctcttcatcctccaggccgcgacgctgaagaggtacgacgcgccactgtccctgaccacgctcatctgcttcgtgggcaccctgcaagccatcgtcgtcaccttcgccatggagcacagcatgtccgtgtggaagatcggcttcgacatgaacctcctcgccgccgcctacgccggtatcgtgacatcgagcattgcctactacgtgcaagggctggtgatgcagagcagggggcccgtgttcgcctcggcgttcagcccgctcatgatgatcatcgtcgccatcatggggtcgttcatcctcgctgagaacatctacctcggagggatcattgggtcggtgctgatcgtcgccggcctgtactcggtgctctgggggaagcacaaggagaacgctgagaagaaggaggccgaggcgatggagatcccggtggcgatcaagggcgtcgacggcaacggcagggtcatggacatcgtggagctggacgaggtgcagctggagaaggcccaggtgaacggcaaggcggcggcggcggcggcgcacgagcacgccgcggtggtcgccgtcacggtccccgccgaggaagcccggatgcagggcaaggacgaggcctag</cdnaseq>

Protein Sequence

<aaseq>MAVAQQQQQQQRQATGESLMQKCKPYVAMVSLQFGYAGMNVITK VSLNHGMSHYVLVVYRHAFATLSIAPFALVLERKVRPRMSFWVFLQIFVLALLGPVID QNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVIFRMEKVNLKKARCVAKVVGTLVTVA GAMLMTLYKGRAVEMVWTKHMHLHGPHQDAVAAAAADKDWLRGSIFLIIATLAWASLF ILQAATLKRYDAPLSLTTLICFVGTLQAIVVTFAMEHSMSVWKIGFDMNLLAAAYAGI VTSSIAYYVQGLVMQSRGPVFASAFSPLMMIIVAIMGSFILAENIYLGGIIGSVLIVA GLYSVLWGKHKENAEKKEAEAMEIPVAIKGVDGNGRVMDIVELDEVQLEKAQVNGKAA AAAAHEHAAVVAVTVPAEEARMQGKDEA</aaseq>

Gene Sequence

<dnaseqindica>1390..1678#1141..1292#885..1043#401..770#1..293#atggcggtggcgcagcagcagcagcagcagcagaggcaggccaccggtgagtcgctgatgcagaagtgcaagccgtacgtggcgatggtctcgctgcagttcgggtacgccggcatgaacgtgatcaccaaggtgtccctcaaccacggcatgagccactacgtgctcgtcgtgtaccgacacgccttcgccaccctctccatcgcgcccttcgcgctcgtcctcgagcgcaaggtccgccctcgcatgtccttctgggtcttcctccagatcttcgtcctcgccctcctcgggtacgtacgcatacaaaaattggagatatatgctctgattttttagcacagtatttgctctattctcacgcactgaccggccaatgtgtatgtatgtccacgtgtaggccggtgatcgatcagaatttctactacgccgggctcaagttcacctcgccgaccttctcctgcgccatgagcaacatgctcccggccatgaccttcgtcatggccgtcatcttcaggatggagaaggtgaacctgaagaaggcgaggtgcgtggcgaaggtggtgggcacgctcgtgacggtggccggcgccatgctcatgacgctctacaaggggcgcgccgtcgagatggtctggaccaagcacatgcacctccacggcccgcaccaggacgccgtcgccgccgccgccgccgacaaggactggctcaggggctccatcttcctcatcatcgccaccctcgcctgggcctccctcttcatcctccaggtcaatatacagatgccgccatgaatccatgcaacgctttagctcgtgattagttgctcgctccaagaacgttggagctcaaggtgttcggtcgaatctgctctgttcttgcaggccgcgacgctgaagaggtacgacgcgccactgtccctgaccacgctcatctgcttcgtgggcaccctgcaagccatcgtcgtcaccttcgccatggagcacagcatgtccgtgtggaagatcggcttcgacatgaacctcctcgccgccgcctacgccgtcagtctcgaaaaccatcttacccatcctctgcctcatcgatcgggggggatcaaacatggcgtgacactgaccaagaaccgatctgtacgtgcagggtatcgtgacatcgagcattgcctactacgtgcaagggctggtgatgcagagcagggggcccgtgttcgcctcggcgttcagcccgctcatgatgatcatcgtcgccatcatggggtcgttcatcctcgctgagaacatctacctcggagggtacgtagccatcgatcgaccaatcaccatgtcgactggcagagctcaagctcgatcggatgttcacgttcttgctgtttcgttcttggttttgcaggatcattgggtcggtgctgatcgtcgccggcctgtactcggtgctctgggggaagcacaaggagaacgctgagaagaaggaggccgaggcgatggagatcccggtggcgatcaagggcgtcgacggcaacggcagggtcatggacatcgtggagctggacgaggtgcagctggagaaggcccaggtgaacggcaaggcggcggcggcggcggcgcacgagcacgccgcggtggtcgccgtcacggtccccgccgaggaagcccggatgcagggcaaggacgaggcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0409500, RefSeq:Os05g0409500