Os07g0588800

From RiceWiki
Revision as of 20:39, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0588800

Description

Conserved hypothetical protein

Version

NM_001066681.1 GI:115473094 GeneID:4343766

Length

4571 bp

Definition

Oryza sativa Japonica Group Os07g0588800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24645530..24650100

Sequence Coding Region

24645599..24645668,24646143..24646286,24646625..24646723,24647159..24647235,24647550..24647658
,24648710..24649038,24649575..24649667

Expression

GEO Profiles:Os07g0588800

Genome Context

<gbrowseImage1> name=NC_008400:24645530..24650100 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24645530..24650100 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccgtgcgcgcgtcggcggcgtgggtggccagccgctcctcccacgtcaaggtcgacatgttagaggtcgagaaggtggtggacaaaatccaaggaaatgttccaaaagttgaatgggacttcgaaggaattcactattttgacgatggccccctcactgtccagtacctcttcgtcctggatgctctgaacttctgcttctggccagataaggatctgagctatgaccatttggcttctggactaaagttagccttagagaaagataagacagcccttgatgcagatcgtctccagagttacactgggcctcagctccgccaactgctgaactggccacgcccactgccaattgaggaggaaagagtacggcttcttcatgaggttggtatggaacttgaaagaagctttggaggtgaagctgcaaatctagtgaagtctgctggaaactctgctgctactctaatcgaacttattacccgtcattttcctggttttcgggatcattcactttacaaaggacaccaggttttcttgtataagagagctcagatatttgttgctgatctgtggggtgcttttaagggacaaaactatggcgagttccacgacatcaagtccatcaccatatttgcagactatattgttcctgctgtcttgagggagcttggcatactgaaatatggctccaacttatcttgctcaattgattcgagcagtgagattgtgcctggaagtgaagaggaagtggagattcgtgcttgttctgtatatgccgtggaaaaaatgagagagctcatcaacaagaagtttggaaagcagcttctgagcattgacatcgatctatggctctggtcatgtggcgttcagaacatggcgttgtcacatcaccgcaccctctcaatatattactga</cdnaseq>

Protein Sequence

<aaseq>MEAVRASAAWVASRSSHVKVDMLEVEKVVDKIQGNVPKVEWDFE GIHYFDDGPLTVQYLFVLDALNFCFWPDKDLSYDHLASGLKLALEKDKTALDADRLQS YTGPQLRQLLNWPRPLPIEEERVRLLHEVGMELERSFGGEAANLVKSAGNSAATLIEL ITRHFPGFRDHSLYKGHQVFLYKRAQIFVADLWGAFKGQNYGEFHDIKSITIFADYIV PAVLRELGILKYGSNLSCSIDSSSEIVPGSEEEVEIRACSVYAVEKMRELINKKFGKQ LLSIDIDLWLWSCGVQNMALSHHRTLSIYY</aaseq>

Gene Sequence

<dnaseqindica>70..139#614..757#1096..1194#1630..1706#2021..2129#3181..3509#4046..4138#agccgcctcccccaaccccgcgctcccctcattgccttatccgaatcgcctcgccgtctccgtctcgccatggaggccgtgcgcgcgtcggcggcgtgggtggccagccgctcctcccacgtcaaggtcgacatgttaggtatgctctctctctctctctctctctctttttgctcgcggcttccggatgtttctcaggtgatagggtttaggattacccccaacgttttatttttgtaaagaaaataggggattgctcgatgttgtctgtctatgtagcagtatgatttctggtctggaatgcatgccatagttgttctagatttattttagataatgagtagttgactctagtagtttagttagccttgcaacgatctctgattgattcagagttctgtgcctgaaattccttgttggctatttatccttttctgggtgtttgttgtttcaaatagtttccaagtatttcttttgagagaagaacttgagattttgtgggaagcaaatgcttttgattagtgcctacaaattgacgctaatgtttcctttgttttgcaaaggaaagcgcatgtacaatcctcatgtatttttattaatttttcccttacagaggtcgagaaggtggtggacaaaatccaaggaaatgttccaaaagttgaatgggacttcgaaggaattcactattttgacgatggccccctcactgtccagtacctcttcgtcctggatgctctgaacttctgcttctggccaggtataagttctagcaatgctgcatcgtttcgaacatgtaaaagttagtcgtactcgtacctaaggatatacaaaataggaccaacaggtatcaagtatcaaccactgtaattatctgatttcaattcttttactcctgtatcaactatagcctttccagattgtgtactagtggttctgtaatctccatgaattataggtgtactaggctactactagcttccagtgacctgaaattgatgttcttactattaagctgcagtatagcctttttcatttctatgtttgtttcttgtagaaccatgatcagtaatatcataatgtttgtaactgaaacagataaggatctgagctatgaccatttggcttctggactaaagttagccttagagaaagataagacagcccttgatgcagatcgtctccagagttacactggtaacttttcttctatacggacatcttgcattatataacaagtatattttatggtttttattgacatcagtatactgaaatatgggattattgtaccagttgtggtgacatggaatcaatagttatacattatgatagcctgcatatggtgcaactttagatcttctcaggccccttattcacgctctacatccttctatcataaaaaagttatgccctctatctcaaaatatagcaacttctccacctacttcctcatctcaactaatcacaacaatatatcatttagtttcacctctccttaatctcactgaaagactctagaagtgcttatattttgggacagtgggaggtattctttttttattagctgagatgcattttgaatactctgtaagtatctcttaaactaaaaaaaacgtttttaaaatgtagggcctcagctccgccaactgctgaactggccacgcccactgccaattgaggaggaaagagtacggcttcttcatgaggtactgttctgtcgcacttaattggttcattgaaaagttgatctctagaaccctgtattctgcttcatgcattttgaaatttgtcagtgtcatcacctaaaagcataaagacactcaccatctctattatgatgaatttagtcatctagttgtttctggaatcatcttgagattgttgataggatctaattatgctcctataatagttattatttttgccataggtttgttgccaagcaattgcataggctacatggctacatccaagaatctcttatttgtaaattatctcttattctggtggatgcatttaggttggtatggaacttgaaagaagctttggaggtgaagctgcaaatctagtgaagtctgctggaaactctgctgctactctaatcgaacttattacccgtcattttcctggtaaatcttccgttacacttatcctctacttggtagcactagttttaactagtccaagagtcccaaccaggatttgtccagctatattacagagagagaaaacaaaaattgaagatactatctgaccccagttgatctgtctgatctaaactgttgcaagcttggtttttgagaacttcttgtaggcttttagatgcccctgaagacaccatatccctgacgaggggagctgtatttactgagaggattatagcattgttctgtagatgggccatttgtccaatgggccaatgagatgtatggtagtgaaacaggactagagaaatggccgtacaaccactggttgtgcatccagatttggcccgctactgtggatctgggaggacacagtaatgagttggtgtggtcaggttgcacttgcagcattccaggcatgtagcttaatcttgtgtgggccatgcacccctgcataggctgtgtttcaaacatgtcatctgatgccatgtccaattgattgttttaaaagtcattttgatttcccttttagaaaagtccctcgtcaagcaaatctttgttctgactacagccattttgttcttgacattctttttttattagtttacttgaatgcctgatgattggaatctttaaaatgaaattgttccagcaagtggttagaacttatttgagtaatttgctcattgattccttgattcttggttcatttcgcttggtgcagaagcttgagtagaattgaagatttatgtttatattacctggccggtttatcatgattatgattatttcctttttaatgtctatttgaaaataaggactaatgcattaaattgtctgcttccagcttccaagttccacctctcaccttagcctaatagggaattctttgctagaggcagtccagcttagcatgtttacatttccaccattcttttcacctgttcatactgcgttgtttcattttgctattttcaatgggcagtaagcacatctgtacagcgatataaattgttctaagatataattttggcaggttttcgggatcattcactttacaaaggacaccaggttttcttgtataagagagctcagatatttgttgctgatctgtggggtgcttttaagggacaaaactatggcgagttccacgacatcaagtccatcaccatatttgcagactatattgttcctgctgtcttgagggagcttggcatactgaaatatggctccaacttatcttgctcaattgattcgagcagtgagattgtgcctggaagtgaagaggaagtggagattcgtgcttgttctgtatatgccgtggaaaaaatgagagagctcatcaacaagaagtttggaaagcaggtaggcacatctgaatcactatcacctaatactttcataccatttcttggtagatacaaagagggggtgtttggttcatggccacactttgccacaccacattttttgtctgccgcagtttgttaggcatgtgtttggtttactgccacagttgtggtttgccacactttttcaatagcatatgccccacatgtcagagactaacaatttgtccaccacacttttgtggctatcacaatttgcctaacgttagttgtggtaaagtgtggccagcaacaaacacacccctagtcactgcacgctccgctacattgatgagcaatcagaaaaggttatattatatttactcttaagtattgaaaaagagcaaaattgaccattctgctttagtttacggtcaagacattcatctagtaggagttttctcaccttatccatgtaactctaagtttgaggcatactataaagcagtcaatgcggctattttatttaactataggaactaacgttgctcttgctcttggtgttcttggcagcttctgagcattgacatcgatctatggctctggtcatgtggcgttcagaacatggcgttgtcacatcaccgcaccctctcaatatattactgagagccagcagctgctgctgggcgccccctccgtccagtgtattgttccagcaactctctactactagtagctgctatagctactgaatttttgtccctcttgggagtgcacaaaagtgcacgctattgtagacttgttggttcgtccagattctgagacaagaaatctttagaacagctcaaagtttccagttgacctgtagggtgtagtagggtgtgcaattggatgcacttggactagaattcagaaccattctgtagagtactgtgtttttcattgatcttgccaaaccattctgtagagtactgtgttattctcaaactcaacaactgcaaagttcatcaggaaattgctactgtagcaagaagaggtactagctgtaacaggtgagctttgtccaggttagatgaattctgcagatcgatgaacattc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0588800, RefSeq:Os07g0588800