Os05g0410500

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0410500| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001062068.1 GI:115463866 GeneID:433877...")
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Gene Name

Os05g0410500

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001062068.1 GI:115463866 GeneID:4338777

Length

4078 bp

Definition

Oryza sativa Japonica Group Os05g0410500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20052008..20056085

Sequence Coding Region

20052312..20053212,20055243..20056081

Expression

GEO Profiles:Os05g0410500

Genome Context

<gbrowseImage1> name=NC_008398:20052008..20056085 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20052008..20056085 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gttgtctccgttgcagcgaacgagatctgcgaccggttcgccacggcggggttcggcgcgaacctgatcacgtacctgacgcagcagctgcacctgccgctggtggaggcgtccaacacgctgaccaacttcaacggcacgtccagcctcaccccgatcctgggcgcgctcgccgccgacgccttcgccggccgcttctggaccatcatcgccggatccgtcttctaccagctcggcatgctcgccctcgtcgcgtccgcgctgctcccttcgctccgccccgcgccgtgcgcgccgacgcacggcgccgcgtcgtgccgccgcgccaccgggtggcagctcgccgtgctctacctcgccctgctctgcacgtccctcggctccggcggcatccgcccctgcgtggtggcgttcggcgccgaccagttcgacggccagcagcagaagcagcggcagaagggtggcggtggcgcggcggcggcggcggcggggaggaagcggagctacttcaacctctacttcttcacgatggggctcgcggtgctgctcgccctgacggtggtggtgtacatccaggagaacgtggggtgggggtgggggttcgggatcccggccatcgccatgttcgtctccatcgtggtgttcgtggcagggtacccgctctacgtcaggctgaagcctgggggcagcccgttcacgcggctggcgcaggtggtcgccgccgcgttccggaagcgccgcgccgccgtgccggaggaccccggcatgctgtaccaggacaaggagctcgacgcgctcatctccaccaatggcaggctgctccacacaaaccagctcacgttctttgaccgagctgcgatcgtgacgccgggtgacatcgccggctccggcgagccggacctgtggcggctgtcgacggtgcaccgcgtggaggagctcaagtccatcgtccggctgctgcccatctggtcggccggcatcctgctcgccaccgccgcgtcgcacaacggcaccttcaccatccagcaggcgcgcaccatggaccgccacctcacccctcgcttggagatcccgccggcgaccatgtccatcttcacgacggtggcgatgctcgccggcctcgccctctacgaccgcgccttcgtgcccctggcgcgccgcgtcacgggcctcccctccgggatcacctacttccagcgcatggccatcgggctgggcatctccatcctcggcgtcgcgtcggcagcgctcgtcgaggtgaggcgccgcggcgccgccgcggaccacggcctcctcgacagccccgccgccgtcgtgcccatcagcgtgttctggctggtgccgcagtacgccgtccacggcgtggcggaggcgttctcgtcggtggcgcacatggagttcctgtacgaccaggcgccggagagcatgcgcagcagcgccgccgcgctcttctggctctccagctccctcggcaactacatgggcacggtgctcgtcacggcggtgcagcgcgccacgcgcggcggcggcgagtggctccaggacaacatcaaccggggcaggctggactgctactactggctcgtcaccaccctcatggtgctcaaccttggatactacctcgtctgcttccacttctacaccatgaagccattagaggtggcagaggaagacgatgacgagaaggagtgtgagctctcctccgtccacaaaaatggcggccccggcgggttggtgtga</cdnaseq>

Protein Sequence

<aaseq>VVSVAANEICDRFATAGFGANLITYLTQQLHLPLVEASNTLTNF NGTSSLTPILGALAADAFAGRFWTIIAGSVFYQLGMLALVASALLPSLRPAPCAPTHG AASCRRATGWQLAVLYLALLCTSLGSGGIRPCVVAFGADQFDGQQQKQRQKGGGGAAA AAAGRKRSYFNLYFFTMGLAVLLALTVVVYIQENVGWGWGFGIPAIAMFVSIVVFVAG YPLYVRLKPGGSPFTRLAQVVAAAFRKRRAAVPEDPGMLYQDKELDALISTNGRLLHT NQLTFFDRAAIVTPGDIAGSGEPDLWRLSTVHRVEELKSIVRLLPIWSAGILLATAAS HNGTFTIQQARTMDRHLTPRLEIPPATMSIFTTVAMLAGLALYDRAFVPLARRVTGLP SGITYFQRMAIGLGISILGVASAALVEVRRRGAAADHGLLDSPAAVVPISVFWLVPQY AVHGVAEAFSSVAHMEFLYDQAPESMRSSAAALFWLSSSLGNYMGTVLVTAVQRATRG GGEWLQDNINRGRLDCYYWLVTTLMVLNLGYYLVCFHFYTMKPLEVAEEDDDEKECEL SSVHKNGGPGGLV</aaseq>

Gene Sequence

<dnaseqindica>2874..3774#5..843#atgagttgtctccgttgcagcgaacgagatctgcgaccggttcgccacggcggggttcggcgcgaacctgatcacgtacctgacgcagcagctgcacctgccgctggtggaggcgtccaacacgctgaccaacttcaacggcacgtccagcctcaccccgatcctgggcgcgctcgccgccgacgccttcgccggccgcttctggaccatcatcgccggatccgtcttctaccagctcggcatgctcgccctcgtcgcgtccgcgctgctcccttcgctccgccccgcgccgtgcgcgccgacgcacggcgccgcgtcgtgccgccgcgccaccgggtggcagctcgccgtgctctacctcgccctgctctgcacgtccctcggctccggcggcatccgcccctgcgtggtggcgttcggcgccgaccagttcgacggccagcagcagaagcagcggcagaagggtggcggtggcgcggcggcggcggcggcggggaggaagcggagctacttcaacctctacttcttcacgatggggctcgcggtgctgctcgccctgacggtggtggtgtacatccaggagaacgtggggtgggggtgggggttcgggatcccggccatcgccatgttcgtctccatcgtggtgttcgtggcagggtacccgctctacgtcaggctgaagcctgggggcagcccgttcacgcggctggcgcaggtggtcgccgccgcgttccggaagcgccgcgccgccgtgccggaggaccccggcatgctgtaccaggacaaggagctcgacgcgctcatctccaccaatggcaggctgctccacacaaaccagctcacgtaagctttttttttattattttctttcctactgcacgtccatttcccgtgtcattgtcttcacttgggcagtaaaacaatttagcatagcgtgcacgtgacggccttggtgtctgtggtagctactttttggcggtagatacattgtcagggcagaaaggagaaagccaagcgagagtgcgctttcctttgaaagtgcttcctctttcttacctagtcacacaagcactgcccctaaagtttagatttggtgtcacatctctatctctagctattgtatcttgtgaccgggagaaaactagattaggttgaatacttattttttcgacgttagagtaggttgaatactaaattaaacacacccactattttagtttcctcccttccgatacatagcatttcctttctgaacagttcgttgccttgcgagttttaattggaataaaagaatatttgcatatacaataaacgggtttgctaaaaataagacgccatatttttcacttaatttcagtcacttttccataagtgatttttctcgctcctgtatgtaagtatgcttccatctctcatatttcctcttctaagtagataataaattacttttaatccctattctcctatatattgtgtattagaaaattacaatgtaataaggaaacatacaatgtacaatgtaattacagtgtaagttttaaaatttacagtgtgattacaatttaaatgcgagtaatttgcaatgtaaaaatgatttgattatttttatggaaaatatagctacatccgattttgcagtgtttttgtctatccgatgttcattttttgaatggaaattaaagataaggtcgaaatgtttacgttttttttggtttttttggagtgaaatgaattagcttagtagtttttgtttctattttgaaatggaaatataaatagaaataatatgctctatttgtaaatggaaatgaacataattaaacaagcatgccctttgtcaggtcgtcattattaacaattatttcaatataaacagtgattattttttaccaagatatattataaaaacatccattgcacgtgcacaattattagtgttttttttacttcataagataagtgtaaatttaaaaggtaatatttaaagcactttaaagcaatcttagtatttgttttgatgtctaagtttaaaagtttcggctgtaattttcaataatcaaagtatgtttctcaacgttgttttcaaccatgtgtatttttgaaatatcgttttcacccatgtgtaaagagaattttttgagccacatcaaaaggactgagcccgatatgttcagatttctttttgacatttctagttgttttttactttaaacccgtatcattatgagaaggggcaatatatatgtatcaacataaaagatagatatatatgtattgaaggataagtattgataaaattcttgaaaaaacatatcgcaagaaaatatttgatttgtattctaggtcaacatagatttacgtccacattttctcaagaattaaaatgatttatctccacattcatgacataagcagctggtttaaatataacaatgttgtaaaacacatattttctccgaggagtgtacactcctacataaaaggggtaaaaaaaactcaacagtaggtgtttcatgaatcacgaggaactatatatgattaattgatcattaataattttcaaagataattcaaatccgcttataatgccgtactggaatgctagtttctttttcctcaatacgggtctaagatacaagcccgaaggggaatatactatgaaacgtactgtagaataaatgcttgcgtgcgtcataacgaaataaatttgccaccattttaagcagtctattgtgatctaacaagacaattgatttttcgacttaattaactgaacgactattatagacggttccatcaaaaatacttgtgagccgtttgtgattaaccccttctgctgtagtaaccgtcccgtgccgtgctaattcgttcaggttctttgaccgagctgcgatcgtgacgccgggtgacatcgccggctccggcgagccggacctgtggcggctgtcgacggtgcaccgcgtggaggagctcaagtccatcgtccggctgctgcccatctggtcggccggcatcctgctcgccaccgccgcgtcgcacaacggcaccttcaccatccagcaggcgcgcaccatggaccgccacctcacccctcgcttggagatcccgccggcgaccatgtccatcttcacgacggtggcgatgctcgccggcctcgccctctacgaccgcgccttcgtgcccctggcgcgccgcgtcacgggcctcccctccgggatcacctacttccagcgcatggccatcgggctgggcatctccatcctcggcgtcgcgtcggcagcgctcgtcgaggtgaggcgccgcggcgccgccgcggaccacggcctcctcgacagccccgccgccgtcgtgcccatcagcgtgttctggctggtgccgcagtacgccgtccacggcgtggcggaggcgttctcgtcggtggcgcacatggagttcctgtacgaccaggcgccggagagcatgcgcagcagcgccgccgcgctcttctggctctccagctccctcggcaactacatgggcacggtgctcgtcacggcggtgcagcgcgccacgcgcggcggcggcgagtggctccaggacaacatcaaccggggcaggctggactgctactactggctcgtcaccaccctcatggtgctcaaccttggatactacctcgtctgcttccacttctacaccatgaagccattagaggtggcagaggaagacgatgacgagaaggagtgtgagctctcctccgtccacaaaaatggcggccccggcgggttggtgtgacgaggtagattaggataattttatcagggtggataatgttgttaattacggagtacgaagtaattagctgtgcatgtgcatgccaaatataatggttgcaaaatacagcctttagggcatgtacaaaaatagagtcagatatgagtctctatattatttagagactagcatcttacaacagttagagacaatatggtttctaatcattaatgtatccaaatactttttcttactcttctttcctttttttcactatcatgcaacaaaatttgctctaataaatgctaagagtcgactctgagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0410500, RefSeq:Os05g0410500