Os07g0602000

From RiceWiki
Revision as of 20:39, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0602000

Description

Similar to NADPH HC toxin reductase (Fragment)

Version

NM_001066738.1 GI:115473208 GeneID:4343827

Length

2741 bp

Definition

Oryza sativa Japonica Group Os07g0602000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25227702..25230442

Sequence Coding Region

25227833..25227965,25228232..25228623,25229374..25229586,25229982..25230151,25230252..25230366

Expression

GEO Profiles:Os07g0602000

Genome Context

<gbrowseImage1> name=NC_008400:25227702..25230442 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25227702..25230442 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcagcagcaggccggtgtgcgtcaccggtggcagcggctacatcgcgacgtgcctcatcaagaagctgctgcagcgaggctgcggcgtgcatgcgaccttgagaaatctcggagatgagaagaagacggcgctgctgaggaggatgcccggcgcggcggagcggctggtgctgttcgaggcggacatgtacgacgccgccaccttcgagcccgccatcgccggctgcgagttcgtcttcctcctcgccaccccgctaattcatgatccgcttagcaccaagtacaagaacaccaccgaggcggctgtggacgcgatgcacatcatcctgcagcaatgcgagcggtcaaagacggtgcggcgcgtcatccacacggcctccgtcaccgccgcgtcaccgctcagggaggacggcgaggggtacaaggacttcatcaacgagtcatgctggactcctcttgatctctccaaccgctatagcaacgtcatgatggatgcttatgtttcatccaagacactcacagagaagctactgctgaggtacaacgagtccgagagcagggcgttcgaggtggtcaccctgacatgcgcgctcatcggcggcgacaccgacaccacgcagctctatcactcgctaagcatcccgctgatcgtgtcgccgctcaccggccaggagctctaccacggcggcctcaagtccctgcaagcgctgctgggttctgtgccactggcgcacatagacgacatatgcgaggcacacatcttctgcatggagcagcaaccatccatcgccggccgatttctctgcgccgttgggtaccccaacatgcaggactatgtcgaccgtttcgctgtcaagtacccggagatcgcgataaagcttcaaggggtgattgggaaggatgtgagggtgaaagcggatacaaacaagcttggggatttggggttcaagtacaagtttacggtggaggagacgttggacagcagcgtggaatgtgccaagaggctgggattactttga</cdnaseq>

Protein Sequence

<aaseq>MSSSRPVCVTGGSGYIATCLIKKLLQRGCGVHATLRNLGDEKKT ALLRRMPGAAERLVLFEADMYDAATFEPAIAGCEFVFLLATPLIHDPLSTKYKNTTEA AVDAMHIILQQCERSKTVRRVIHTASVTAASPLREDGEGYKDFINESCWTPLDLSNRY SNVMMDAYVSSKTLTEKLLLRYNESESRAFEVVTLTCALIGGDTDTTQLYHSLSIPLI VSPLTGQELYHGGLKSLQALLGSVPLAHIDDICEAHIFCMEQQPSIAGRFLCAVGYPN MQDYVDRFAVKYPEIAIKLQGVIGKDVRVKADTNKLGDLGFKYKFTVEETLDSSVECA KRLGLL</aaseq>

Gene Sequence

<dnaseqindica>2478..2610#1820..2211#857..1069#292..461#77..191#accaccatatttgactggactggaggaagaagagatcgaacaacaacaatcgatcgaggagaggtcgtgtgacacgatgagcagcagcaggccggtgtgcgtcaccggtggcagcggctacatcgcgacgtgcctcatcaagaagctgctgcagcgaggctgcggcgtgcatgcgaccttgagaaatctcggtacatcttacccatctcttcctcactttctttccaaattcttgttgattcattcatggatgcatgcatggttggtgatcatgcatatatctgacgacaggagatgagaagaagacggcgctgctgaggaggatgcccggcgcggcggagcggctggtgctgttcgaggcggacatgtacgacgccgccaccttcgagcccgccatcgccggctgcgagttcgtcttcctcctcgccaccccgctaattcatgatccgcttagcaccaaggtaacccacgcacgcagtgcacactgtctggaactgaaaaagagaaaaaaaaaaggaaaggaaaggaaagttaagtttatcatgcagcactctggtagatacagatgcagaggcagggtgtaattttatttcataataatggatccttcctttttaaaaaaaaaaattaaatgcagaagcctggaattaataaactccaacgatggcctgagtttaagatggatatatcatggattatttgagtgttctgtttttttttagaattcactactactagttctaggcatgcagtcagtagcagcactaggtgcattgtgcaacaacaattagcaggatgagaggttgctgtgtttgtaagtttgttaattgttaattatgtttttatattattgcagtacaagaacaccaccgaggcggctgtggacgcgatgcacatcatcctgcagcaatgcgagcggtcaaagacggtgcggcgcgtcatccacacggcctccgtcaccgccgcgtcaccgctcagggaggacggcgaggggtacaaggacttcatcaacgagtcatgctggactcctcttgatctctccaaccgctatagcaacgtcatgatggatgtaatcagctacccattctccgtcaaaaaatatatgttcacatatctatctatctatctatctatctatctatctatctatcaaggagcgtatccatcctgcaactagtatattacgaacatcatgcacaacagctataacaaattaaatgttatcaatttctttgaaaagtttgcacatacttttaatagtactacacatatatgtaaattattttcaaatccattatattttagtgataagaaataaaaagaattctagtaattttaaaagtataagtaatccctccatttcatattataagttattttgacttttttcttttggtcaaacttatttaagatttgattaagtttataaaaaaatagctacatctatcacactaaattagtttcaataagtatgacatttaatatattttgaaagaatagttcttttgtgtcgaaaatacttgaaaatgtttgaatggaaaaaaaaatcaaaacaacttacggtatgaaatacagggagtatatttgaatattgtcttatctatctatctatctatacttaattataatttgatactgggagagattttgcacgctaaaaaagttctggttatttcttagatagatcatgttattatgaacatagatcttattgacaattgtacactagcttgagttgtaaattttcaaactgaatctctcatacatgcggttcaaatatgagaaatgatagatcatcacatgaattgtgcttttgtaggcttatgtttcatccaagacactcacagagaagctactgctgaggtacaacgagtccgagagcagggcgttcgaggtggtcaccctgacatgcgcgctcatcggcggcgacaccgacaccacgcagctctatcactcgctaagcatcccgctgatcgtgtcgccgctcaccggccaggagctctaccacggcggcctcaagtccctgcaagcgctgctgggttctgtgccactggcgcacatagacgacatatgcgaggcacacatcttctgcatggagcagcaaccatccatcgccggccgatttctctgcgccgttgggtaccccaacatgcaggactatgtcgaccgtttcgctgtcaagtacccggagatcgcgataaagcttcaagggtaagtgcattgttgatttgttctctcgatcttatgttttctttataggatatatgaatgtgtcatgtatgtaccgtacttcctccgtttcacaatgtaagttattctagcttttttcacatttatattgattttaatgaatctagacatatatatgaatctagactcattaatattagtatgaatgtggaaaaagttagaatgacttacattgtgaaacggagggggtagatcttatatctgtttgtttgtgtggtctgtgttagggtgattgggaaggatgtgagggtgaaagcggatacaaacaagcttggggatttggggttcaagtacaagtttacggtggaggagacgttggacagcagcgtggaatgtgccaagaggctgggattactttgagcgtgccaagcagtataatttctgtcctaatgtctgtatttgttccggcccttttactccaaccgtatctaagaaatgtaccctaaagctatcagaacattgttcatcgataatattacctccgtttcagg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0602000, RefSeq:Os07g0602000