Os07g0604300

From RiceWiki
Revision as of 20:39, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0604300

Description

Similar to Phytochelatin synthetase (Fragment)

Version

NM_001066754.1 GI:115473240 GeneID:4343844

Length

3529 bp

Definition

Oryza sativa Japonica Group Os07g0604300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25411944..25415472

Sequence Coding Region

25412092..25412170,25413049..25413128,25413764..25414220,25414378..25414531,25414615..25414892
,25414962..25415254

Expression

GEO Profiles:Os07g0604300

Genome Context

<gbrowseImage1> name=NC_008400:25411944..25415472 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25411944..25415472 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctcctgctgctgcgtatgggcgtctccgtcgcgctgctcgtcgccttcttctcctctctgattccgtcgtcagaggcatacgatccgcttgatccaaatgggaacataacaatcaagtgggatgtgctgcaatggactccagatggatatgttgctgttgtttcactatacaactatcagcagtatcgacacattcaatcacccggatggaaactcggatgggtgtgggcaaagaaggagataatctgggcgatgaacggcggccaagcgacggagcaaggcgactgctcaaagttcaaatcaaatatcccacattgctgcaagaaagatcctgagatcgtggacctgctcccgggaaccccttacaacatgcagattgccaactgctgcaagggaggagtgctcaactcgtgggcacaggaccctgcaaatgccatagcatcattccaagtcagtgttggtcaggcagggacgacgaacaagacggtgcgggtgccgagaaatttcaccctgaaatctccaggtccagggtatacctgtggcagtgccaaggttgtgagacctaccaagtttttttcgcaggatggaaggagaacaactcaggctcacatgacatggaatgtgacttgcacatattcacagattgtcgcgcaaagatctccgacgtgctgcgtttcgctctcgtctttttacaatgataccatagttaactgcccaacatgctcatgtggctgccagaataataaaccaggaagctgtgtagagggaaattctccttatttggcttctgttgtgaacacccataacaaggacagcttgacacctctagtccagtgcacttctcatatgtgcccaataagagttcattggcatgtgaaggttaactacaaggagtactggagggtcaagatcacagtgacaaacttcaattacaggatgaactactctcagtggaacctagtcactcagcaccccagttttgacaatctgacaaccattttcagcttcaactacaaatctttgaacccatatggagtaataaatgataccgcgatgttatggggaatcaagtactacaatgacttgctcatgacggcgggtccagatggaaatgttcagtctgagcttctgttcaagaaggaccccaagagtttcacctttgagaaaggctgggccttcccaagacgtgtatacttcaatggtgacaactgtgtgatgccaccaccagatgcatatccatggctgccaaatgcttcaacaagagtgatgtcttcaattctccttccattcattaccatttggacagcactgacattcttgatggtttacgcatag</cdnaseq>

Protein Sequence

<aaseq>MALLLLRMGVSVALLVAFFSSLIPSSEAYDPLDPNGNITIKWDV LQWTPDGYVAVVSLYNYQQYRHIQSPGWKLGWVWAKKEIIWAMNGGQATEQGDCSKFK SNIPHCCKKDPEIVDLLPGTPYNMQIANCCKGGVLNSWAQDPANAIASFQVSVGQAGT TNKTVRVPRNFTLKSPGPGYTCGSAKVVRPTKFFSQDGRRTTQAHMTWNVTCTYSQIV AQRSPTCCVSLSSFYNDTIVNCPTCSCGCQNNKPGSCVEGNSPYLASVVNTHNKDSLT PLVQCTSHMCPIRVHWHVKVNYKEYWRVKITVTNFNYRMNYSQWNLVTQHPSFDNLTT IFSFNYKSLNPYGVINDTAMLWGIKYYNDLLMTAGPDGNVQSELLFKKDPKSFTFEKG WAFPRRVYFNGDNCVMPPPDAYPWLPNASTRVMSSILLPFITIWTALTFLMVYA</aaseq>

Gene Sequence

<dnaseqindica>149..227#1106..1185#1821..2277#2435..2588#2672..2949#3019..3311#gtcttgtctgacttcttgttgcctcttgcctccttcttcttcttcttcgtcttcgtcgtcgcgaaatacaggcgtgtggggcgagagtgatcaggtggcagctgggtgtttcttcttcttcttcttcagctcgagttcttccttagccatggcgctcctgctgctgcgtatgggcgtctccgtcgcgctgctcgtcgccttcttctcctctctgattccgtcgtcaggtcggtgcctgtgcctgtgcctctgcatttcccattggttcttgcagtactatttggatttcggttcttggttctcaggttgttcttctccggttgattcattcacgcctaaatttttgcgtcttttttttgggtgccgtgtgctgtatgattcgtctgtaaggattccggagtttttttttttttggtgttgttttttttttcttcttattttactctattcggagaaaatttctcttccccatcgtagcgcgattatcgtgatcaaaatggatgtgacaataaaggaatgagctgttttccgtttacctcattaaagattttaatttggtgtttatgacctttccaaaatggacaattaagagtcatgaataccaaatttaaatttttattgttgtatatgcgtggtgcgatgggttttgctcatagtatatgtttgtttgtttcggatcatatgtcaaaacaaactatttctgtttagttcatgatcaggttttaatccatttttccaaaaaaaaatgtcaaagcaaactgaacatgtagcgagtgtgtgcatattatttctgttagagctcagagcgaagaatcagccttatgtgtcgcgtcatgctacaatcgtgatcttttcttgttacgtactactatatgttgttaacacaaatattataatcactgaagctattggcacaaatcactattatgtttcatgtatgtctattcatctgaactgtgatcctgatcatgcacaagatgataaagttcgatcctttatcttcacatgcatgattaaccatcaaagatgagatgtgccctaccaaaacgttcttcaatctggatgtatcactaaattctgacttgtttcttgatacattatgcagaggcatacgatccgcttgatccaaatgggaacataacaatcaagtgggatgtgctgcaatggactccagatggatatgttgtgagtaaaccttaatttactattatgtgtctgtaactactttattaccattatcatctatcaaccaactcaatgcatgtcgctgttgccacatgagtccacatctgctttcatcaatctctgcacattagtactctgtcttgttggcagattgacgcttcactgtctctcttttgtaactgaaacactgaaagtagtggcctttcgttaaatttccattcatgccacttttttagcttttgactttcttgataaacttacaactggcatgaccaaatactggtgcatcgatgcttgcaatccatggttgctggtcaaagacatgacatcacgacacaaatctattttctttgtatttatctattttatctgttagactgttacttataggtgctctgaactgttgatcttgattaatatcagtactcacaagacataacacaaaccttacataaactcaattttgttgcattttgaactagtcaagaccaaatctttgcactatctcttatcttcagtgtatttttacacaattcagaaaactgtcaacctgcacaaaattcccttcctgccttcctggttcacaggacttgtgattagttgctgagataatgttaaaaatccattttctccaggctgttgtttcactatacaactatcagcagtatcgacacattcaatcacccggatggaaactcggatgggtgtgggcaaagaaggagataatctgggcgatgaacggcggccaagcgacggagcaaggcgactgctcaaagttcaaatcaaatatcccacattgctgcaagaaagatcctgagatcgtggacctgctcccgggaaccccttacaacatgcagattgccaactgctgcaagggaggagtgctcaactcgtgggcacaggaccctgcaaatgccatagcatcattccaagtcagtgttggtcaggcagggacgacgaacaagacggtgcgggtgccgagaaatttcaccctgaaatctccaggtccagggtatacctgtggcagtgccaaggttgtgagacctaccaagtttttttcgcaggatggaaggagaacaactcaggctcacagtaagatttttttctgaagtttccatgatcttagtatttgccgtgcaaagtagttcagggatgagcttacaatctattgcaacagattcagaattgttcttgtttcgatactgccttttcgtgcatcatcggtgaccgcttgatttcttttgtgcagtgacatggaatgtgacttgcacatattcacagattgtcgcgcaaagatctccgacgtgctgcgtttcgctctcgtctttttacaatgataccatagttaactgcccaacatgctcatgtggctgccagaataataaaccaggaagctgtgtagagtaagttacattaacatgacaaaactactcaaaatcagttttatgttcagttaacatgactgttgcaacgtactgtttgacaggggaaattctccttatttggcttctgttgtgaacacccataacaaggacagcttgacacctctagtccagtgcacttctcatatgtgcccaataagagttcattggcatgtgaaggttaactacaaggagtactggagggtcaagatcacagtgacaaacttcaattacaggatgaactactctcagtggaacctagtcactcagcaccccagttttgacaatctgacaaccattttcagcttcaactacaaatctttgaacccatatggagtaataagtaagccctgaaaacaattctactcatgtggttaattatttttcagatatttactgtttcttttttcagatgataccgcgatgttatggggaatcaagtactacaatgacttgctcatgacggcgggtccagatggaaatgttcagtctgagcttctgttcaagaaggaccccaagagtttcacctttgagaaaggctgggccttcccaagacgtgtatacttcaatggtgacaactgtgtgatgccaccaccagatgcatatccatggctgccaaatgcttcaacaagagtgatgtcttcaattctccttccattcattaccatttggacagcactgacattcttgatggtttacgcatagtgaaaggaaatcgtaattttacgtattcaggaaagttttgaccttgttgtgcattacaaagttttagatgatatgttgcatgaagagaagattcagtgcagatacctaaccataaaccgtcgttgatcattgtataaacttacttgtatacatttaatctcagacaagataagatgcaaacacagtacttcttaaggaattttatcctctcttccttt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0604300, RefSeq:Os07g0604300