Os07g0607400
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os07g0607400 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001066770.1 GI:115473272 GeneID:4343861 |
| Length |
2993 bp |
| Definition |
Oryza sativa Japonica Group Os07g0607400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:25621347..25624339 |
| Sequence Coding Region |
25622032..25622271,25623279..25623485,25623586..25623775,25623932..25624269 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:25621347..25624339 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:25621347..25624339 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccgccacgggcgtgctcgtcgtcgttgtggcgctcgtgttcgccgtgacggtggctggcggcggcggcgccggagtaggaggtgatggcgggttcatcacgtgggaggacctgagcatgccggccggggcggcgcggagcagcacgtgggacgacacggccggcggtggcggcggcaagaggagcggcggcggcggcggcggcgagcagcggacgacgatcgtggtgtcgccggacgggacggggcactcgcgcaccgtgcagggcgccgtcgacatggtccccgccggcaacacgaggagggtcaagatcgtcgtcaggccgggcgtctacagggagaaggtgacggtgccgatcacgaagccgttcgtgtcgctgatcggcatgggcaccggccacacggtgatcacgtggcactcgcgcgcgtccgacgtcggcgcgtcgggccaccaggtgggcaccttctactccgcctccgtcgccgtcgaggccgactacttctgcgccagccacatcaccttcgagaactcggcggcggcggcggcgccgggggcggtggggcagcaggcggtggcgctgaggctgtccggcgacaagacggtgctgtacaagtgcaggatactggggacgcaggacacgctgttcgacaacatcgggaggcactacctctacaactgcgacatccagggctccatcgatttcatctttggcaacgcaaggtccttgtaccagggttgcacgctgcacgccgtggcgacgagctacggcgcgatcgcggcgtcgcagcggagctcgccgtcggaggagtccgggttcagcttcgtcggctgccggctcaccggctccggcatgctctacctgggaagagcatggggcaagtactccagagtggtgtactcctactgtgacctcagtggcatcatcgtcccccagggatggagcgactggggtgatcaatcaagaacaaagtga</cdnaseq> |
| Protein Sequence |
<aaseq>MAATGVLVVVVALVFAVTVAGGGGAGVGGDGGFITWEDLSMPAG AARSSTWDDTAGGGGGKRSGGGGGGEQRTTIVVSPDGTGHSRTVQGAVDMVPAGNTRR VKIVVRPGVYREKVTVPITKPFVSLIGMGTGHTVITWHSRASDVGASGHQVGTFYSAS VAVEADYFCASHITFENSAAAAAPGAVGQQAVALRLSGDKTVLYKCRILGTQDTLFDN IGRHYLYNCDIQGSIDFIFGNARSLYQGCTLHAVATSYGAIAASQRSSPSEESGFSFV GCRLTGSGMLYLGRAWGKYSRVVYSYCDLSGIIVPQGWSDWGDQSRTK</aaseq> |
| Gene Sequence |
<dnaseqindica>2069..2308#855..1061#565..754#71..408#gtgtgttccaaattaatccgcgtggttaattagctctagctagagatcggtagctctcgactagttggacatggccgccacgggcgtgctcgtcgtcgttgtggcgctcgtgttcgccgtgacggtggctggcggcggcggcgccggagtaggaggtgatggcgggttcatcacgtgggaggacctgagcatgccggccggggcggcgcggagcagcacgtgggacgacacggccggcggtggcggcggcaagaggagcggcggcggcggcggcggcgagcagcggacgacgatcgtggtgtcgccggacgggacggggcactcgcgcaccgtgcagggcgccgtcgacatggtccccgccggcaacacgaggagggtcaagatcgtcgtcaggccgggcgtctacaggtacgtgggtgttcgaccgatcgatcgcctccccactacctgtccctctcgtaaccgccatggacgagttaatgtcgtcctatctcgcgaagctttttaagactggaattgaagctgcaatggcgctgacctcgccggcgacggcgtgccgtgcagggagaaggtgacggtgccgatcacgaagccgttcgtgtcgctgatcggcatgggcaccggccacacggtgatcacgtggcactcgcgcgcgtccgacgtcggcgcgtcgggccaccaggtgggcaccttctactccgcctccgtcgccgtcgaggccgactacttctgcgccagccacatcaccttcgaggtatacacacaccgcacgtcgtcgtcgtcgtcgtcgccggccggctcgccggcggcggcgaaacgtgttcctggatgtaacaagcgtggtggtggtgcagaactcggcggcggcggcggcgccgggggcggtggggcagcaggcggtggcgctgaggctgtccggcgacaagacggtgctgtacaagtgcaggatactggggacgcaggacacgctgttcgacaacatcgggaggcactacctctacaactgcgacatccagggctccatcgatttcatctttggcaacgcaaggtccttgtaccaggtaactaataaataaataaaattaaaccacagctgctgttactactactgttgctgccttttactactgtctaattaagtcaggatgttgcccaaattaaccacaggtatttttgtggtaattcttggtaaggatcagtagtgtactgttaccatgagaaataatcctataagaaaaaccgacttctatttctatttagaagggacgcgcacatacgccactacacacaacaagtatgaccgctgaatactcgtttaaagagatagagagcagttgcaaatccctaatctcactaagttcttattggatgtttaatacaacatatgttttttctatttgacattggtcaaatcaaaattgaactaaccaatgtcacgtaaataaaaatggaggaagtattttatattttttaagaatatgtttatgtatagcatgataaaatctttggacactctgtcccccacactttgctctagttgtcctctagactagtagtactataccttttatgctgtgtctcctgttggtccgatcagagctgtcacaaactcacaattcaggcattcaccaactcttccattttataccttacagcaaaagaacttctcactctggtgaggcacctagattagcaccttgcttaacctagctatatagctaagtgggataaggtggttaggcacttagccctgcaccaatgccaccaatgctcttacacaaatcggtgttcagaattagtggtcacattctctttctaccttcggcacaactgtcactgaatgaaaaatgccggagtgagtgttaatgagagtgacattacatggcaatgtggtgccatgatcaatttatttttttcacgaacatgcaaaaaccttacacgtcaatatattattattagatcaatatacaactgtaacacgtggaggcagtaatatgccatgattaaaatggacaattagcttcttggcagtctgaatttttgtaactttgttttttctttttgtcagggttgcacgctgcacgccgtggcgacgagctacggcgcgatcgcggcgtcgcagcggagctcgccgtcggaggagtccgggttcagcttcgtcggctgccggctcaccggctccggcatgctctacctgggaagagcatggggcaagtactccagagtggtgtactcctactgtgacctcagtggcatcatcgtcccccagggatggagcgactggggtgatcaatcaagaacaaagtgatcaactttcctgccatttaatcacacactcaatttgctgctcttgattaaaattacagttacaattataattgcagctactctgtcaggttcacatggcatattaatattattgatcgaagagattatattttagctgaattttactagttaccaacttaccatcctcgatgatcaaatggcataggaagtggttgggagttgcattgcaggctcaccaaacagtcttgataggggaattcagttaccacatgtgacaaggctgttaccaaatgagttccttttcttttctgaaatcctagagacgatactgccatatcatatccgtcagaaaatgacagagaatgtgtctgaatcttctgacaggacggtgctgttcggggagtacaactgcaaagggccaggggcgagcacgaagcagagggtgccgtggtcgcggacgctcacctacgacgaggcgcggccgttcatcggccggagcttcatcaacggcgagcagtggctccggctgtagatcatcgccgattcttcacaagttcagaaagttcagactgctgctggttccttctccactgcagtctgcagatagaacatgtacctagtagatataatagctgacatgtaacgatgtaccatgtaacaaactttgacatacatccatatgtagtgagatgagcagccccatc</dnaseqindica> |
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