Os07g0628600

From RiceWiki
Revision as of 20:40, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0628600

Description

Origin recognition complex subunit 6 family protein

Version

NM_001066886.1 GI:115473504 GeneID:4343985

Length

2740 bp

Definition

Oryza sativa Japonica Group Os07g0628600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26704910..26707649

Sequence Coding Region

26704910..26704998,26705233..26705323,26706055..26706146,26706323..26706410,26706563..26706625
,26706712..26706823,26706992..26707072,26707174..26707278,26707389..26707435
,26707530..26707649

Expression

GEO Profiles:Os07g0628600

Genome Context

<gbrowseImage1> name=NC_008400:26704910..26707649 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26704910..26707649 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacatgtcgtcgatcgcctcccgcctcggcctctccggctcccgccccgtcgtccgcaaggccgccgagctccgccgcctctgcgacgtcaccttcgactcctccgtcctcggcatcggggaggtgtgcaaggcgatcatctgcctcgagatcgcggcgtccaagttccaggtgatattcgacagggcagaggcggtgcggatgagtggcatgtctgagaaggcgtatatcagatcattcaacgcgctgcagaatggtcttggtgtcaagactacattggatgtgcgtgaattgggcatccagttcggctgtgtcaggctgatacctttcgtgcagaagggattgtcgctctacaaggagcgttttttggcggcactgccaccttctcgccgggcaagcactgactttggtcgaccagtgttcactgcagctgcattctatttatgtgcaaagaggcataagcttaaagttgacaagctgaagttgattgatttatgcggaacatctagttctgaatttacaactgtttcaacatccatggcagacctttgctttgatgtttttgggattgccaaagagaagaaggatgcaaagtccataaaagggagtagagaactgctggatgttttgcctagcaaaaggaaacatgatgacgacagtgattcatctggtgaatcctcaggggatgaccaagatgaactagacctgccaacttacaaaagacacaagaaaatggaaaaggaagcttacaatgactggaagtcatcggttctctccaacaagcaaaccaaaccagaccctgcaaaaccaaggaaacaagctcagcttaacttcaagaagaagccgtcagacatggccctagaagtatcatcggcagccaactaa</cdnaseq>

Protein Sequence

<aaseq>MDMSSIASRLGLSGSRPVVRKAAELRRLCDVTFDSSVLGIGEVC KAIICLEIAASKFQVIFDRAEAVRMSGMSEKAYIRSFNALQNGLGVKTTLDVRELGIQ FGCVRLIPFVQKGLSLYKERFLAALPPSRRASTDFGRPVFTAAAFYLCAKRHKLKVDK LKLIDLCGTSSSEFTTVSTSMADLCFDVFGIAKEKKDAKSIKGSRELLDVLPSKRKHD DDSDSSGESSGDDQDELDLPTYKRHKKMEKEAYNDWKSSVLSNKQTKPDPAKPRKQAQ LNFKKKPSDMALEVSSAAN</aaseq>

Gene Sequence

<dnaseqindica>2652..2740#2327..2417#1504..1595#1240..1327#1025..1087#827..938#578..658#372..476#215..261#1..120#atggacatgtcgtcgatcgcctcccgcctcggcctctccggctcccgccccgtcgtccgcaaggccgccgagctccgccgcctctgcgacgtcaccttcgactcctccgtcctcggcatcgtgagcaaccggggctttttcctcctatgctgtttctttttggttggcttggctcgtggttcgtgtctctgagagatcttttggcttcgcgcagggggaggtgtgcaaggcgatcatctgcctcgagatcgcggcgtccaagtgagtgttcgacgaactgccttacaagtgttcgacgaattgcccgcctagagggggaatcgtgttgctcagtggcgtgacctggtttgctaatctggtggtttgcgcaggttccaggtgatattcgacagggcagaggcggtgcggatgagtggcatgtctgagaaggcgtatatcagatcattcaacgcgctgcagaatggtcttggtgtcaagtacgcttctttcctcttctgttctaccaatcgatgcgtataaactatgcctcgtcttcgctcttgactaatacaatggaattgcctaattcctcttgcaggactacattggatgtgcgtgaattgggcatccagttcggctgtgtcaggctgatacctttcgtgcagaagggattgtcgctgtaagtttgctctcttgtggccgtggaagctcgtttgtactgaaatcttgtatttgagtccaattgttcattatgagctgtgcaattttgtttgattaagctgtagtcgagtgttgcatacaaattatttgatgccttcgaactgtacctaatgtgtttttctttcagctacaaggagcgttttttggcggcactgccaccttctcgccgggcaagcactgactttggtcgaccagtgttcactgcagctgcattctatttatgtgcaaagaggcataaggtgctagcagaatcagtagcaatgattttttttatatagataatttgcatcttgtaagctgatgttttcccctatttattttgcagcttaaagttgacaagctgaagttgattgatttatgcggaacatctagttctgaatttacaactgtaatgattaacagtctcatatattcacgtgaattgctagtgcatatatcttatcctagcacgcatgtctagacaatgggagtatgcatgtgcatgattggatttatgctatggatcatcctgttttgactgttaatttgtggtggctgcaggtttcaacatccatggcagacctttgctttgatgtttttgggattgccaaagagaagaaggatgcaaagtccataaaagggagtagaggtatctgtgttctgcaggatccatcctttttttccttaatttctcagcatcctttcttcatatacaggattgactattcatttcagaattgtacacatgacaactagcagtgttgaagtgcataatttgcttggaatcttgtgcagtatactcataatttgtaacctttgacgcagaactgctggatgttttgcctagcaaaaggaaacatgatgacgacagtgattcatctggtgaatcctcaggggatgaccaagatgaactagacgtatgcaccactttaatatggcttacttgcagagtattgataattcatgtcataaaactttagggataagcttgccttattttgtaacttgcagagtatgaaactgcctaagatgcttggtattgatactatatatgaatttttttctgcaacattaggctaacaatggtgtagtttcaaacgttcacttggtcacttgcattttgtaagatgagagcgagaaaaaaaagaacaacatataagtttggttggttctgtaaattgtttggaaaaaaattgcatgctgcatttgtttaacctgtaaagaaccttttgattttggcagtaaggttttctggttacaaaggcataaccttctagtttggtgattttagcttgttgaaatatgatcacatatagtttaatctacacaatgaatggctgcaaaagccgatacaaatgcatggtgccagtgtgccacttatgaatactgattccttaattatgtactagacttagagaggagcttgtaaaaatttcaagggtaaagactccaaagtgaatatgattgtgcatatttccgagtagtttctaatttattgaacctgtagcacctttagaatgtttctgaccatattccttttacgttcatttgggttctttttggcgtcacagatttttgtagtcaaatgatatgtgcattcttctggacaactgactgatgcagctgttcctgtttcttccaatctcagctgccaacttacaaaagacacaagaaaatggaaaaggaagcttacaatgactggaagtcatcggttctctccaacaagcaaaccaaaccaggtttggactctgaactgttctacctcgtccacttagggtgtgtttagttcctgaaaaaagttagaagtttgaagaaagttaggagtttggaaaaaaagttggaagtttatgtgtgtatgaaattttttgatgtgatatgatgtgatggaaagttgggaataggggcaaactaaaaacggccttagtgagttttaacgatctagccgatgagcttatcgtgctgtattgttgcagaccctgcaaaaccaaggaaacaagctcagcttaacttcaagaagaagccgtcagacatggccctagaagtatcatcggcagccaactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0628600, RefSeq:Os07g0628600