Os07g0633200

From RiceWiki
Revision as of 20:40, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0633200

Description

Similar to SC35-like splicing factor SCL30a, 30a kD

Version

NM_001066907.1 GI:115473546 GeneID:4344009

Length

3128 bp

Definition

Oryza sativa Japonica Group Os07g0633200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26925702..26928829

Sequence Coding Region

26926464..26926612,26927139..26927216,26927948..26928112,26928190..26928291,26928398..26928545

Expression

GEO Profiles:Os07g0633200

Genome Context

<gbrowseImage1> name=NC_008400:26925702..26928829 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26925702..26928829 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagaggctacagttacagcccatcaccacctccaagaagctatcggagaagggccagcagcccaattccccgtgaccgttatggtggacgtggtagagatctcccgaccagtcttctagtcaggaatcttcgtcgggactgccggccagaggaccttcgtcggccattcggacaatttggtcgtctcaaagacatatatattccaagagattactatagcggtgaaccgcgtggatttggatttgtccagtactacgatcctgatgatgctgccgatgcaaaatactacatggacgggcaggttattctgggcagggaagtagctgttgtatttgcagaggagaacagaaagaagccttctgagatgagatctcgcgacagaataagtggcagcagaggtcgttcctatgaccaaaggtactctaggtcaccgcgatactctcctcctccaaggggccgctcgccttaccgcagcccgagctactcaaggtctccttcgcctcggtatgcaaggcgcaggatgagggagaggtcctactcaccagttgagagcagatcaaggagcaggagcccggtcgaggaaggatacggtggtggatccacacggagagagaggtcgctctctgtcagtgaatga</cdnaseq>

Protein Sequence

<aaseq>MGRGYSYSPSPPPRSYRRRASSPIPRDRYGGRGRDLPTSLLVRN LRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYYMDGQ VILGREVAVVFAEENRKKPSEMRSRDRISGSRGRSYDQRYSRSPRYSPPPRGRSPYRS PSYSRSPSPRYARRRMRERSYSPVESRSRSRSPVEEGYGGGSTRRERSLSVSE</aaseq>

Gene Sequence

<dnaseqindica>763..911#1438..1515#2247..2411#2489..2590#2697..2844#agaatccaaaactccagaggcgaacgcgatgcgacgagacgagacgaaccgaagaagcattccctccctccgctcgagcccctccgttttgatccgattcgctcgcggtaagcgtgattccatcgctgtaatcgcctgctaggtcggttgtgatggtgagattgtttcctgtttgatctccgggatgaagcctaaaccctaggagaggtgtgtttatgagcagtaacataattcgttgggtgattttggttatataatgatccggatcgatgctgtagttgattatgtggtggctctaggggcgtctttaatctactagttcgttaggtgcggttggatggggtttgggatgatttggtcgtgatgcttggtgaatttgtggtctcgcactgtgatgctgcgtacttacacactgaaattctcgttttcaaaaaacaaacgctgaaattctatgcggaaactagtgttgttagttggcgccttggtagtatagacttgtatagttctctgcaattattcggctgtgtggtgattgtactctgaagcgctcgattaatttctacctttttactttctgtaaatagtttaagccatggacttaatttcgattagagggaatatgcttgcgctatgctcttgagacaattgattacttcctgtttattattattgctagtgtattaacgctattacatttgtttactgctagttttattttcttttctttttctaatcttatgctgtttgttgttctagattgatatggggagaggctacagttacagcccatcaccacctccaagaagctatcggagaagggccagcagcccaattccccgtgaccgttatggtggacgtggtagagatctcccgaccagtcttctagtcaggaatcttcgtcgggactgccggtaaaatttcttgaaatttcctgtggctagtaattgcgagcgcacaacttgtagatgtgccatgtatgaaatttatactttgttgttgaactcgacatatttacaaaatattgtacggttacgcatctgtggcattctcaagttctttcttttgtgacgctctgcttattgagctaagatggttttgtgagcctatatgtgttctttaattatcacttggtgctactacattggtaattggagtgataaatttcaatatttataaaattccagttccagtcttaagccggttatagcggccaaaagaataggtatgtctttgagctgcatgctgcatgcttttctgtgtgcccgtggaaatttggcgcgaataattggcatcaaatttaaatgcattcctgaagaggaaatcagacatttagttgaagcttcattatgttcttggttatgattcttgtatgtactgcaactggaattccatctttcctctttagcccttttaactcacagtacattatgtatgcaggccagaggaccttcgtcggccattcggacaatttggtcgtctcaaagacatatatattccaagagattactatagcgggtaaggcaccgtatgtagactagtactccctccgtttcaccatgtaagactttctagcattgcccacatatatatagatgttaatgaatataaacacatatatatatgtttagattcattgacatctaaatgaacgtaggcaatgctagaaagtcttacattgtgaaacggatgaagtattaattagcatttacaccagcagagactacttaaaatttatagctgggatttatacattgacataaaaagtgcactctgcgaactctccttttttttaaaaaaaaagtgtgttctagttttactagcagacattaaaatacttctgtcatccacttgggattaacagtgaaaacaagtttgtgaagacacaagtctttagtgattcaagtctgttgaagagaagggaagagactgagagttgcaagttaagagatgtgcaacataaatattacagatgaagagaagaaatgtaattacgggtttaagagatagttcaaagtcatgaagtgtttgaagtctatatttataatctgacaggtgcaaggtcagaagcagagtgcacactcttgttttacttaatttgtattcaatgctgtacaaccatgaaaagcttcataagtgaatttgtttgtttgctgggtgtcgcatagctgaaaacagaaccactgccatttttaagtaagactgttttaaaccttttattcagacatccatttctttgtccttttcagtgaaccgcgtggatttggatttgtccagtactacgatcctgatgatgctgccgatgcaaaatactacatggacgggcaggttattctgggcagggaagtagctgttgtatttgcagaggagaacagaaagaagccttctgagatgagatctcgcgacagaataaggttcgttgtcccatcctccctagcgcaaatgcataaactcgctgctctattcacttatctgcttgcacaatctgcagtggcagcagaggtcgttcctatgaccaaaggtactctaggtcaccgcgatactctcctcctccaaggggccgctcgccttaccgcagcccgagctactcaaggtatatatgcgcacacgctctttctgtcttcatgcttcagcctaccagcttcaaactactgttgcatttcacaatgacacgcttgaaaacatgtctgtcttggcaggtctccttcgcctcggtatgcaaggcgcaggatgagggagaggtcctactcaccagttgagagcagatcaaggagcaggagcccggtcgaggaaggatacggtggtggatccacacggagagagaggtcgctctctgtcagtgaatgaggtctagagcgctaccggtaatcttcaactagtagtcgctatggctttgcgaaccatatgttactgtcgtgctgtagtggtatcaataacttggcaaatgttgcgtcattacgcctttcctggaagatcgcaaacatattaagttacaacgccggtgaattctgctcactttggagttgttcttgctttgtgcttattttgctgtggattctgtagaaaacgttttgatatggttgcccggtggatggggatctggcacgatggtcgaaccttggagcatttac</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0633200, RefSeq:Os07g0633200