Os05g0415200

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0415200| Description = Similar to Phytochelatin synthase| Version = NM_001062089.1 GI:115463908 GeneID:4338799| Length = 2616 bp| Definiti...")
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Gene Name

Os05g0415200

Description

Similar to Phytochelatin synthase

Version

NM_001062089.1 GI:115463908 GeneID:4338799

Length

2616 bp

Definition

Oryza sativa Japonica Group Os05g0415200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20308905..20311520

Sequence Coding Region

20308905..20309420,20309521..20309684,20310527..20310587

Expression

GEO Profiles:Os05g0415200

Genome Context

<gbrowseImage1> name=NC_008398:20308905..20311520 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20308905..20311520 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtctaaaccaagcagccgagcggaaagcaaccaggcggcggcggcggtgccgtcgctgtacgggcgcgccctgccgtcgccgccggcggtggagttcgcgtcggcggaggggcggcggctgttcgcggaggcgctccaggggggcaccatgcaggggttcttcagcctcgtctccgtcttccagacgcagtcggagccggccttctgcggcctcgccacgctcgccgtcgtcctcaacgcgctccgcatcgacccggggcggcggtggaagggcccctggcggtggttcgacgagtccatgctcgactgctgcgagcacctcgacacggtcagggcggaggggatcaccttcggcaaggtcgcctgcctcgcccactgctccggcgccgacgtccgcaccttccgcgccgcccaggccacgctcgccgacctccgccgccacctcctgcgctgcgcctcctcccaggattgccatctcgtcgcctcctaccaccggaagcttctcggccagactggaacagggcatttctcgccgattggcggctaccatgctgggcaggacatggcgctgatcctggatgtcgctcgcttcaaataccctcctcattggattccgctgccgcttctttgggaagccatgaacacgattgatgaagcaactgggcttctcagggggttcatgcttatctcaaggaatactgaagctcctttattgatccgtgcagtggtaaattaa</cdnaseq>

Protein Sequence

<aaseq>MASKPSSRAESNQAAAAVPSLYGRALPSPPAVEFASAEGRRLFA EALQGGTMQGFFSLVSVFQTQSEPAFCGLATLAVVLNALRIDPGRRWKGPWRWFDESM LDCCEHLDTVRAEGITFGKVACLAHCSGADVRTFRAAQATLADLRRHLLRCASSQDCH LVASYHRKLLGQTGTGHFSPIGGYHAGQDMALILDVARFKYPPHWIPLPLLWEAMNTI DEATGLLRGFMLISRNTEAPLLIRAVVN</aaseq>

Gene Sequence

<dnaseqindica>1..516#617..780#1623..1683#atggcgtctaaaccaagcagccgagcggaaagcaaccaggcggcggcggcggtgccgtcgctgtacgggcgcgccctgccgtcgccgccggcggtggagttcgcgtcggcggaggggcggcggctgttcgcggaggcgctccaggggggcaccatgcaggggttcttcagcctcgtctccgtcttccagacgcagtcggagccggccttctgcggcctcgccacgctcgccgtcgtcctcaacgcgctccgcatcgacccggggcggcggtggaagggcccctggcggtggttcgacgagtccatgctcgactgctgcgagcacctcgacacggtcagggcggaggggatcaccttcggcaaggtcgcctgcctcgcccactgctccggcgccgacgtccgcaccttccgcgccgcccaggccacgctcgccgacctccgccgccacctcctgcgctgcgcctcctcccaggattgccatctcgtcgcctcctaccaccggaagcttctcggccaggttgctgcctgctcgtccgcacctctctcggaactcgaattcgacgatttctgtttgctgttcgttctgaacgaatgatgtttgtttggattcgatgcagactggaacagggcatttctcgccgattggcggctaccatgctgggcaggacatggcgctgatcctggatgtcgctcgcttcaaataccctcctcattggattccgctgccgcttctttgggaagccatgaacacgattgatgaagcaactgggcttctcagggggtatatattctctagtatatcttcctgtctcttgtggacattaaggccccccttgatctgaacgaaaaacattagaactttgtagaatttcaaatcctgtaggaattaaaaagacgcgaatattaggcaatgaactaatatcaaataattagaaggggtgaggcttcgaacccaggtcgtctagcccaccaccttgtggagctagtcggaagacccttgggtgtttctcaaatcctgtaggaattttccctaaatagtcctttgaaataaaggatccgacactatagaatcctatggaattcctcaatccattcctatcaaaatccttcatttttgttaaaactcgttcctatcgaaatcctgtgtttttaaaatcctacgtttcaaagggccctaatgtgttttagaggttcttgtatgcagcgttgggattagtgtcttgtaacaatgcagctcttggattaagcgactgtattaatttgggttatctagtgttcatcgactgtcaggaatcaggaatcaggaaacactgctctgcaattatcagtttattactgttaatgaagaaaatttggacaatgctgtagggtgtatgctcagtccgtttagcgttaatgaagaaaatttggacaatgctgtagggtgtatgctcagtccgtctagcacttaaacgtggtcattggggctcttgagaagttgagatatgcaatatgttggccttaatatcacgctacctacgtgttttgtcctgaaactatgcaatgatgtgtcagtttagactaaatgggcaaattagtttgtagttggcgagtttaacatgtcggcatcttcatatttggtaggttcatgcttatctcaaggaatactgaagctcctttattgatccgtgcagtggtaaattaacatgccaatgcttggtgaatcaaatatgtaagtgtcaagtgtcacccttgatctatttttttctcattcctttcaatgctatgcagaattgcagggatgaaagctggcaaagcatggcaaagtattgcatagaagttgtcccaaatcttttgagggataacagcgtagacaatgtcctaacaattctttcccgtttagtgaatcatcttcctcccaatgctggaaattttatcaaatgggtcattgaagttaggagacaagaggaaggaggatccagcccaagtaaagaggctaacgaaatgcctttcctgaaggtcattttaattttccatttctgttgttgggtcagttttgtttcctctgttcaaccagttaatgttgtatgttcgcttgcaggaaaaggtcctacagcaaatccgtgatactaagctttttcagctggtccacaaactgcaatgttctaagcagccctgttgtagttgctcgtctttaacggacgaagattccatttcccagattgcagccagtgtgtgctgtgaagcaaccgcattgctaagtgggaatctgtcatcaagagatggattatttttcagtgaaacttgttccggatgtacacaagtgaatgatgaggggcttaaaaatgtcattacaggcaaagtggtatctgaaggcaatggacatgttgataagctttcaccgatatcctcgactgaaacatgcttctgcaattcaactctgagcaatgaaactgtcaattatccatcaaacacagacattctaactgttctattactgtcgttacatcctagcacatggttgtgcattgaagatgagaagttgaaagctgaatttcagagccttgtttctacggacgatcttcctgatcctcttaaactggaggtgtgctgtctcactcctagaaccttgcattga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0415200, RefSeq:Os05g0415200