Os05g0415400

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0415400| Description = Similar to OsNAC6 protein| Version = NM_001062090.1 GI:115463910 GeneID:4338800| Length = 1757 bp| Definition = Ory...")
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Gene Name

Os05g0415400

Description

Similar to OsNAC6 protein

Version

NM_001062090.1 GI:115463910 GeneID:4338800

Length

1757 bp

Definition

Oryza sativa Japonica Group Os05g0415400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20315296..20317052

Sequence Coding Region

20315638..20316087,20316402..20316715,20316823..20316991

Expression

GEO Profiles:Os05g0415400

Genome Context

<gbrowseImage1> name=NC_008398:20315296..20317052 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20315296..20317052 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaatgcagctgtccttgcctgtcttgccaacgggttttcgtttccatccaaccgatgaggaactagtcatcaactacctccagaggcgtgctaccgggctatcgtgccccatccccataatcgcagatgtcgaaatatacaacttcaacccgtgggagcttccatccatggctctatttggggaacatgagtggtacttttttacactacgcgaccacaggtaccccaatagtgtgcgccctagtcgctcagcggcgtcaggcttttggaaggccaccggcactgacaagcccgtccaagttgctaacatgcaaagcactcctgtagctatgaagaaggcacttgtattctatgttggccgcccgcccatggaaaccaagactacatggatcatgcatgagtaccgtctcacaaacacgggagggtccactgcctcccacccatccttgtcttcatccaccgcacacccttctgtgaagctagacgagtgggtgctatgcaagatcttcaacaagtccccagagccggacaacaccgcaccaccatcaaacgtcgtctcacggttacagtgctcgccgccgctgccgccgccggcggcaccgcccggcaactacccgccgctgccggtgggtgcgacgaacgacggcggcgtgttcgccggcgccggcgacatgctcttcaccatccaagagcaccaggagggaacaccatcgatgctgccgccgatccctaaccttgagccaccggcggcaacaattgggaattcctctctcaatggcactgctgctgctgctgctgctgctgatggccatggccgccttgaggaagaggacaccagcgcctacaccttcaccgaccaggaaatggagcagatgctcatggacctgatggaccaggatttctttggcaatgatcaaccccaggagtga</cdnaseq>

Protein Sequence

<aaseq>MAMQLSLPVLPTGFRFHPTDEELVINYLQRRATGLSCPIPIIAD VEIYNFNPWELPSMALFGEHEWYFFTLRDHRYPNSVRPSRSAASGFWKATGTDKPVQV ANMQSTPVAMKKALVFYVGRPPMETKTTWIMHEYRLTNTGGSTASHPSLSSSTAHPSV KLDEWVLCKIFNKSPEPDNTAPPSNVVSRLQCSPPLPPPAAPPGNYPPLPVGATNDGG VFAGAGDMLFTIQEHQEGTPSMLPPIPNLEPPAATIGNSSLNGTAAAAAAADGHGRLE EEDTSAYTFTDQEMEQMLMDLMDQDFFGNDQPQE</aaseq>

Gene Sequence

<dnaseqindica>966..1415#338..651#62..230#atcctccacaagagaaactaggatcttcaagtatagctagcattgcgccctcatttcatccatggcaatgcagctgtccttgcctgtcttgccaacgggttttcgtttccatccaaccgatgaggaactagtcatcaactacctccagaggcgtgctaccgggctatcgtgccccatccccataatcgcagatgtcgaaatatacaacttcaacccgtgggagcttccatgtaagccatatgtgtagtctagtgtgcattaatatttatgcttgattatagaatggatgaacttaccaactactatacacaatgtgttaatgatattggtgttgcagccatggctctatttggggaacatgagtggtacttttttacactacgcgaccacaggtaccccaatagtgtgcgccctagtcgctcagcggcgtcaggcttttggaaggccaccggcactgacaagcccgtccaagttgctaacatgcaaagcactcctgtagctatgaagaaggcacttgtattctatgttggccgcccgcccatggaaaccaagactacatggatcatgcatgagtaccgtctcacaaacacgggagggtccactgcctcccacccatccttgtcttcatccaccgcacacccttctgtgaaggtacaaacaacacaaactatattgagaaattattttttttcttgagagaatggtccttcgtttttagtgtgtcgtctgtttagttatgaaattctttgacaaggtaatacatgacaaaattcgacttctgtaacttgtagaaaaaactaactacactcctccttgcaaaagaaaaaacagagtacatattccattcctagtcgatctcaatcgttagttcatcatatatgcaaggcttaatatctcccccttttttactgatcttaccaatagattaaccatgttatcatggatctatatgcgtatatatgcagctagacgagtgggtgctatgcaagatcttcaacaagtccccagagccggacaacaccgcaccaccatcaaacgtcgtctcacggttacagtgctcgccgccgctgccgccgccggcggcaccgcccggcaactacccgccgctgccggtgggtgcgacgaacgacggcggcgtgttcgccggcgccggcgacatgctcttcaccatccaagagcaccaggagggaacaccatcgatgctgccgccgatccctaaccttgagccaccggcggcaacaattgggaattcctctctcaatggcactgctgctgctgctgctgctgctgatggccatggccgccttgaggaagaggacaccagcgcctacaccttcaccgaccaggaaatggagcagatgctcatggacctgatggaccaggatttctttggcaatgatcaaccccaggagtgaactgtgtggtggagtgattttcatatcattccatagctctgatctgtgctggagagtgaatttagtatctattgtaccagatagaataaaaccagaaaagaaataaaagaaggccaaagaaaaaagcaaaaagaaaattgtataattactaggtttggatgccgtctgtagaaccttgtgtgctatgtaacttttttctttgtattttggcattttcatcatattgtgtcataaataaagcagggctttcttttgtagtttgccatctcaatcttgcaccgtgatgttataaaaaaacaaaattaattattgtgctacactgtacttttggctgtgttcggc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0415400, RefSeq:Os05g0415400