Os05g0416400

From RiceWiki
Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0416400| Description = Similar to Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) (Fragment)| Ver...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0416400

Description

Similar to Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) (Fragment)

Version

NM_001062093.2 GI:297604511 GeneID:4338803

Length

4537 bp

Definition

Oryza sativa Japonica Group Os05g0416400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20384296..20388832

Sequence Coding Region

20384296..20384309,20386198..20386684,20386930..20387895,20388815..20388832

Expression

GEO Profiles:Os05g0416400

Genome Context

<gbrowseImage1> name=NC_008398:20384296..20388832 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20384296..20388832 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactcctgctcgctggttgttgtcatggatcttgttagcatttccatttacatgtggtccatggtagccctttgtaccatcatcactgcaatggtgaccaccaaacttgcaagagtaagaagaccaattaccctcaatccaaagagcaaaagaccacttccaccggtggtgaatgtcattgcccttctagagcacttacctaggctatgtacaaagggtgtaattccggtgtacaaagggagtgtgttcacggtaagtctgtttggactgaaggcaaccttcttggttggaccagaggtctcggctcatttctatcaagggatggattcggagattagccagggcgatctgtatgaattcaccgtacccttgttcggcaaaggggttggctttgacatagataatgctactcgaaccgagcatctccgtttctttattgatgcgataaagacgtcgaagttgcgaaaccatgtcaactccatggtgcaggaagtagaggactattttgcaaaatggggagaaaatggcatagttgatataaaacatgagtttgagaagttactcatgttgatctcaggccattgcctactcgggaaggaggttcgggacaacatgttcgatgaggtcttctcattgttccatgaacttgacagcggggttggcttgggcagtgtcatcttcccatatatcccaattccatcgcacattcgatgcgacaaagcacacgccaaacttgcaaaaatattctccaaaattgtgaggtcgaggagggactccaaccgaccagccgagcaggatgtactccagtacttgatcgattccaaacatagagatggaaactccactaccgaacaagaggtcactgggtggatcatttctatggtttttgccggaaaacacacaagcacaaactccactacctggactggagcatgcctactaactcatgacaagttcttgacagaggcactcgatgagcaaaagcatatgattcaaaaacatggagaccatatagattataatgtgttgttagatatggacatcttgcactgctgcatcaaggaggccctaaggatgcaccctgtggcgccaataatatatcgcaaggcacaaaaatcatttgttgtaaggacgagagaaggcgatgcatatgacattccagaagggcataatttactgagcccaatgatattcaacaacagactaccctacatttataaggatccccatatgtatgacccagataggtttgctcctaaaagagaggaggataaagttggtggcatgttctcttatacatcgtttggtggtgggaggcatatttgcattggtgaggcttatgcttatatgcaaattaaggtgatatggagtcatttactaaggaactttgagttgaaattggagtctcctttccctaagacaaactggagcaaaatcctgctggaaccttggggaaaagtaatggcccgctggcaagggtga</cdnaseq>

Protein Sequence

<aaseq>MDSCSLVVVMDLVSISIYMWSMVALCTIITAMVTTKLARVRRPI TLNPKSKRPLPPVVNVIALLEHLPRLCTKGVIPVYKGSVFTVSLFGLKATFLVGPEVS AHFYQGMDSEISQGDLYEFTVPLFGKGVGFDIDNATRTEHLRFFIDAIKTSKLRNHVN SMVQEVEDYFAKWGENGIVDIKHEFEKLLMLISGHCLLGKEVRDNMFDEVFSLFHELD SGVGLGSVIFPYIPIPSHIRCDKAHAKLAKIFSKIVRSRRDSNRPAEQDVLQYLIDSK HRDGNSTTEQEVTGWIISMVFAGKHTSTNSTTWTGACLLTHDKFLTEALDEQKHMIQK HGDHIDYNVLLDMDILHCCIKEALRMHPVAPIIYRKAQKSFVVRTREGDAYDIPEGHN LLSPMIFNNRLPYIYKDPHMYDPDRFAPKREEDKVGGMFSYTSFGGGRHICIGEAYAY MQIKVIWSHLLRNFELKLESPFPKTNWSKILLEPWGKVMARWQG</aaseq>

Gene Sequence

<dnaseqindica>1..14#1903..2389#2635..3600#4520..4537#atggactcctgctcgtgggattcatcataaaattcacaagaaaaccagcaggttttttcttttcaatcgctggctaaaacttgtaggtagtctttctccctcgtactaacttcaaattagattattattttttctaaaattttctaaattaatgatctatcaatttattgtgttattacaactattattttttttcatactttcatgtgactttgttttatcaattgaagatctaaatttcaaaagtgtcaacttcaaacgatattttgaagcagtaaatgatttcatttgaaaaagtcatgaacacaaaagttgtagaactgatcgagatctacaatttttattttggtcatttattcatttgacaaaatgatagtaacattgtttacacaatttacacatctatcttataatttatgaaaccatatgggagatatgtaaaatttatgaacaatgttactattactttgtcggatgaacaaatgaccaaaataaattttgtagatttagatggattatacaactttgttattgattacttttttagttgaagtcattcactaataaaaaattctatttgaattctcaaactttgaatttcaaatttcaaattattcaaatagagtcagatggagaaatgaccaaaataaaaattttgcatctcgatgagttctacaactttggttttggtgacttttccatttgaaatcatttattaacaccaatttttgttcatgtggttatgctagttcaatgaccgcatgttactagaaaatatttttatcaatggtagtaagtatcggtgcatttacatgggctattaatattgtatccatcctaaaatatacggtgtattagttttgtacaatatcttctacattatactttgaatattaatttcttcaataatatattatcaacaactacgaaattaacatcatcataagtatgaaagattatggaaaacaaatataaagatatgacatgcatatgcatatttccttttctgctacttcctatatactatcaatttcatatttgtaaatttagaattcgtaaataaaaggttgtattacgatgaggttttttcttgttctaaccatttggagattatattctaattagcaaattcaaatttgtattctcaattataggttttcatgttttagttgttctgaaatttgaaataagtatcatgttgtacgtacttaactacttatctagtcccagttagtttcttttctattttaatatttctcaaaatcaacataaataattagcaggttataaatgacatggactcataacaaagaaatataaatttatttttcttgataacataatttctaaaattgtgcaaatttataaatataatgttatgctctatgtatgtagagtatcaattttagttttcaaggtttagcaattccaaaaattcagaagtaaaaatactaagttgtacccatcttggattataatctttctcatttaattctgaaatcctaaaataataattagtaggccgtaacttacatcgacgatcctttttatttaggccgttatatttcggtccaccaaaatagatggccagatttattctagttctaacattcaaaactaacaattatcaagttgtaactgtcacattcccctcttaatttaagttattataattcagtcatacaaaggtggattgtcagatttattcactatttatcctgttaacgtgagaattttctcggagtaccctagtatatgtataatcttgagaaatatatccatttatttgtctgcagagctagcatgtatttctgttcggccatgtattattttcccacaatttccaactcatctgtgattctttatattgttgcagtgctgttaattcctacctccaactaggctggttgttgtcatggatcttgttagcatttccatttacatgtggtccatggtagccctttgtaccatcatcactgcaatggtgaccaccaaacttgcaagagtaagaagaccaattaccctcaatccaaagagcaaaagaccacttccaccggtggtgaatgtcattgcccttctagagcacttacctaggctatgtacaaagggtgtaattccggtgtacaaagggagtgtgttcacggtaagtctgtttggactgaaggcaaccttcttggttggaccagaggtctcggctcatttctatcaagggatggattcggagattagccagggcgatctgtatgaattcaccgtacccttgttcggcaaaggggttggctttgacatagataatgctactcgaaccgagcatctccgtttctttattgatgcgataaagacgtcgaagttgcgaaaccatgtcaactccatggtgcaggaagtagaggtaagtcagcaaatatgtccggtataacttttttctataaccttactgcaaaaacatgcctgaaggaacttaagatttttctaaggtactcaaaaaaaatgtctagactgttattttttttaagaaattgaaatactattttcatataaatcacttctatttttttcccagatccgccattgtgcatgctcgtgccttttttttgcttgaatgcatatctcattatatatacattatacatgcaggactattttgcaaaatggggagaaaatggcatagttgatataaaacatgagtttgagaagttactcatgttgatctcaggccattgcctactcgggaaggaggttcgggacaacatgttcgatgaggtcttctcattgttccatgaacttgacagcggggttggcttgggcagtgtcatcttcccatatatcccaattccatcgcacattcgatgcgacaaagcacacgccaaacttgcaaaaatattctccaaaattgtgaggtcgaggagggactccaaccgaccagccgagcaggatgtactccagtacttgatcgattccaaacatagagatggaaactccactaccgaacaagaggtcactgggtggatcatttctatggtttttgccggaaaacacacaagcacaaactccactacctggactggagcatgcctactaactcatgacaagttcttgacagaggcactcgatgagcaaaagcatatgattcaaaaacatggagaccatatagattataatgtgttgttagatatggacatcttgcactgctgcatcaaggaggccctaaggatgcaccctgtggcgccaataatatatcgcaaggcacaaaaatcatttgttgtaaggacgagagaaggcgatgcatatgacattccagaagggcataatttactgagcccaatgatattcaacaacagactaccctacatttataaggatccccatatgtatgacccagataggtttgctcctaaaagagaggaggataaagttggtggcatgttctcttatacatcgtttggtggtgggaggcatatttgcattggtgaggcttatgcttatatgcaaattaaggtgatatggagtcatttactaaggaactttgagttgaaattggagtctcctttccctaagacaaactggagcaaaatcctgctggaaccttggggaaaagtaatggtaagttacaagaggaggaggctccccacagcttagtagagaaattaatatacatggttatccgtatgtcttgtatttttgtcatgtgtcttgtttgtaatacccatgtaacaagaataattccgtatgccaccacatggctaggtgtcgatgtatgtaagggtgtgtttggataatgaaaaatgtggaatgggattaggattgcgaaataaatgaagggttaggattaaatggaagagggataatgaatggttaggatttaaagatgtcttttggtgggtgggaaatcatttccctatcccattagccaaacactacctaaatgtttataattgaaatttgatgtatttcttatgcaattgcaactgctctagtaggaatacatgatattgataatccacaatattataataatggcacacccaaagtaagtgatatggtttctacatatctagtgtcaagaaagagcatccacaatgcacgtggttgtcttgttggtttgaagagaaataatgctctaatgggtgaacacaacttatcaggctccgtttggctaatgagttatgcccatcaggaaatggaaatgatatactggtagaatgaggtggtagattatgtgaagggaaattatattccatgtttgatttgatgaatgggaaatggaagtttctagattaatgaccaaaatacccctcacaataagttgtggtagatgaatcaacagattaaaagggtcaaaatggtgagggcgatttggtaatttctcctagcactctatccaccccctcaatccagcaggattgcatatcccattcccgaactacccaaataacggaaatataaaatttggaaataatgtccatttcccattccctttatccaattttccaaacgtagcctcatagatgaccttttctaggcccgctggcaagggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0416400, RefSeq:Os05g0416400