Os07g0646800

From RiceWiki
Revision as of 20:41, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0646800

Description

Similar to Avr9/Cf-9 rapidly elicited protein 231

Version

NM_001067000.1 GI:115473732 GeneID:4344105

Length

1851 bp

Definition

Oryza sativa Japonica Group Os07g0646800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27666780..27668630

Sequence Coding Region

27666930..27668063

Expression

GEO Profiles:Os07g0646800

Genome Context

<gbrowseImage1> name=NC_008400:27666780..27668630 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:27666780..27668630 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctccccccaccgccgtctccgcctccaccgccggcctgatctggtccttgtcgccctcgctctcgctcgtcgtcaccacctcggtggcgcttctgctcgtgctcggcggtgtgtccgggatccgcgtcaacgtcatccggctcccgtcggcgtcgccgttcccggcgttccgggaggcgccggcgttcaggaatggcgacgggtgcccgccggcgagggggtcggcggcggcggagggggggcgggtggacgtggccatgacgctcgacgccaactacctgaggggcaccatggccgccgtgttctccatcctgcagcacacggcgtgcccggagagcgtcgcgttccacttcctcgccgcgcgctccgacccggacgccggcgacctcgccgccgccatccgcgccaccttcccctacctcggcgccgccgtcagcgtctaccgcttcgacccgtcgcgcgtccgcggccgcatctcccgctcggtgcgccgcgcgctcgaccagccgctcaactacgcgcgcgtctacctcgccgacacgctccccgccggcgtgcgccgcgtcctctacctcgactccgacgtcgtcgtcgtcgacgacgtgcggaagctctggtcggtggacctcgccgggcacgtggtggcggcgccggagtactgccacgccaacttcaccaagtacttcaccgacgcgttctggtcggacggcgagctcagcggcgccgcgttccgacgcggccgccgccggccgccgtgctacttcaacaccggcgtgatggtgatggacatggggcggtggcgcgacggcgggtacacgcggcgggtggaggagtggatggcggtgcagaagcggaggcggatctaccacctcggctcgctgccgccgttcctgctggtgctcgccggcgacatcaaggcggtggatcaccggtggaaccagcacgggctcggcggcgacaacgcggaggggaaatgccggagcctgcacccgggcccggtcagcctcctccattggagtggcaaggggaagccatggctgcgcctcgactcgcggaagccctgcgccgtcgactacctctgggcgccgtacgacctctacaaggccgccgtacccgcgctcgaggagtga</cdnaseq>

Protein Sequence

<aaseq>MAPPTAVSASTAGLIWSLSPSLSLVVTTSVALLLVLGGVSGIRV NVIRLPSASPFPAFREAPAFRNGDGCPPARGSAAAEGGRVDVAMTLDANYLRGTMAAV FSILQHTACPESVAFHFLAARSDPDAGDLAAAIRATFPYLGAAVSVYRFDPSRVRGRI SRSVRRALDQPLNYARVYLADTLPAGVRRVLYLDSDVVVVDDVRKLWSVDLAGHVVAA PEYCHANFTKYFTDAFWSDGELSGAAFRRGRRRPPCYFNTGVMVMDMGRWRDGGYTRR VEEWMAVQKRRRIYHLGSLPPFLLVLAGDIKAVDHRWNQHGLGGDNAEGKCRSLHPGP VSLLHWSGKGKPWLRLDSRKPCAVDYLWAPYDLYKAAVPALEE</aaseq>

Gene Sequence

<dnaseqindica>151..1284#acggctataccaactttatcctcgccccctccccaccacccctctctcccctcccctctcaaacaccaccgccaccgccatggtcacgcccttcccctcctcctagcaccacctctccccttcccgcgctacgcgggacgaggaccagggatggctccccccaccgccgtctccgcctccaccgccggcctgatctggtccttgtcgccctcgctctcgctcgtcgtcaccacctcggtggcgcttctgctcgtgctcggcggtgtgtccgggatccgcgtcaacgtcatccggctcccgtcggcgtcgccgttcccggcgttccgggaggcgccggcgttcaggaatggcgacgggtgcccgccggcgagggggtcggcggcggcggagggggggcgggtggacgtggccatgacgctcgacgccaactacctgaggggcaccatggccgccgtgttctccatcctgcagcacacggcgtgcccggagagcgtcgcgttccacttcctcgccgcgcgctccgacccggacgccggcgacctcgccgccgccatccgcgccaccttcccctacctcggcgccgccgtcagcgtctaccgcttcgacccgtcgcgcgtccgcggccgcatctcccgctcggtgcgccgcgcgctcgaccagccgctcaactacgcgcgcgtctacctcgccgacacgctccccgccggcgtgcgccgcgtcctctacctcgactccgacgtcgtcgtcgtcgacgacgtgcggaagctctggtcggtggacctcgccgggcacgtggtggcggcgccggagtactgccacgccaacttcaccaagtacttcaccgacgcgttctggtcggacggcgagctcagcggcgccgcgttccgacgcggccgccgccggccgccgtgctacttcaacaccggcgtgatggtgatggacatggggcggtggcgcgacggcgggtacacgcggcgggtggaggagtggatggcggtgcagaagcggaggcggatctaccacctcggctcgctgccgccgttcctgctggtgctcgccggcgacatcaaggcggtggatcaccggtggaaccagcacgggctcggcggcgacaacgcggaggggaaatgccggagcctgcacccgggcccggtcagcctcctccattggagtggcaaggggaagccatggctgcgcctcgactcgcggaagccctgcgccgtcgactacctctgggcgccgtacgacctctacaaggccgccgtacccgcgctcgaggagtgagctagctagctagctcgccgccggcgagccgaggcggcggcgtgattgcattgcatgcattcgagggcagacatacgagagaagaggagagagggagagggagaggaggtgtgtacacgtacgtacgcacgtgcgtgcgtgcatgcatgcatgcatgtgtccatacgtgcaaaacacaaaaggggcaaaaaaaaaaaaagttgtgacgtcatgcaaaacggcacaaataagattaattaggactggaagtggtgaagaaatacatgccaagaggatcaatggaaggaaggcgctccgtctcgtagaaaaactaatcctaattacgaatctaaatacatatgtatctaggtttataactaggattgacttttttttacagagtagtacatatgtggatgcatgtgccgatctctttttctttcttcctcttgttttgggttccttgaaaaattttctaccgttgaatttgattcatcatggtgacgatgatgtacataggtgttttgattggagtacgatgtgtaaaaaattagggtggtgagatcagaagtgggtggtgcactttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0646800, RefSeq:Os07g0646800